Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 2.6e-46 188.3 94 100.0
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 3.8e-37 157.9 88 87.5
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 1.5e-33 146.0 86 84.9
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 3.8e-29 131.3 70 88.6
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-28 129.8 71 85.9
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-26 122.9 58 100.0
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-26 121.3 75 73.3
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 1.8e-23 112.5 72 76.4
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 4.9e-21 104.4 55 85.5
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 4.9e-21 104.4 55 85.5
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 4.9e-21 104.4 55 85.5
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 4.9e-21 104.4 55 85.5
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 4.9e-21 104.4 55 85.5
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 4.9e-21 104.4 55 85.5
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 4.9e-21 104.4 55 85.5
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-20 103.2 55 83.6
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 1.4e-20 102.8 55 81.8
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 4.2e-20 101.3 55 83.6
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 6.0e-19 97.4 72 61.1
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 5.7e-17 90.9 71 59.2
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 5.7e-17 90.9 71 59.2
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 5.7e-17 90.9 71 59.2
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 9.7e-17 90.1 90 47.8
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 9.7e-17 90.1 92 48.9
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-16 89.7 71 59.2
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 4.8e-16 87.8 71 54.9
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 6.3e-16 87.4 90 46.7
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 6.3e-16 87.4 90 46.7
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 6.3e-16 87.4 71 59.2
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 3.1e-15 85.1 84 51.2
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 3.1e-15 85.1 64 59.4
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 4.1e-15 84.7 84 50.0
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 5.3e-15 84.3 86 45.3
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 9.0e-15 83.6 72 54.2
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 9.0e-15 83.6 72 54.2
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 9.0e-15 83.6 72 54.2
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 9.0e-15 83.6 72 54.2
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 9.0e-15 83.6 72 54.2
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 9.0e-15 83.6 74 52.7
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-14 81.6 76 52.6
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-14 81.6 69 55.1
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 3.4e-14 81.6 71 53.5
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-14 81.3 72 52.8
BraA01t02487Z Brassica rapa HOM05D008062 ORTHO05D008395 5.9e-14 80.9 49 71.4
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 1.0e-13 80.1 72 51.4
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 1.3e-13 79.7 90 45.6
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 1.7e-13 79.3 73 53.4
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-13 79.0 84 47.6
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 2.9e-13 78.6 72 47.2
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 3.8e-13 78.2 73 47.9
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 6.5e-13 77.4 72 47.2
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-12 76.6 72 47.2
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-12 76.6 72 47.2
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-12 76.6 72 47.2
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-12 75.9 72 47.2
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-12 75.9 72 47.2
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-12 75.9 72 47.2
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 3.2e-12 75.1 66 48.5
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 4.2e-12 74.7 73 46.6
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 5.5e-12 74.3 84 40.5
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 5.5e-12 74.3 72 45.8
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-11 73.2 72 44.4
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-11 73.2 72 45.8
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 1.2e-11 73.2 62 51.6
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 3.6e-11 71.6 71 46.5
C01p37510 Brassica napus HOM05D008062 ORTHO05D041448 1.8e-10 69.3 51 74.5
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 3.0e-10 68.6 71 47.9
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 3.9e-10 68.2 66 43.9
BolC3t19920H Brassica oleracea HOM05D008062 ORTHO05D041448 8.8e-10 67.0 49 75.5
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 6.3e-08 60.8 56 44.6
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 6.3e-08 60.8 56 44.6
BolC9t53917H Brassica oleracea HOM05D008062 ORTHO05D011707 8.2e-08 60.5 32 90.6
BraA05t20613Z Brassica rapa HOM05D008062 ORTHO05D008395 8.2e-08 60.5 32 90.6
BraA07t28305Z Brassica rapa HOM05D008062 ORTHO05D011707 8.2e-08 60.5 31 93.5
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-07 59.7 56 46.4
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-07 59.7 56 42.9
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 1.4e-07 59.7 56 42.9
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 4.1e-07 58.2 47 51.1
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 4.1e-07 58.2 83 33.7
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 5.3e-07 57.8 56 42.9
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 5.3e-07 57.8 56 42.9
C03p76590 Brassica napus HOM05D008062 ORTHO05D011707 9.1e-07 57.0 32 84.4
Sp3g27700 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.5e-06 56.2 55 41.8
SpUn0012_0140 Schrenkiella parvula HOM05D000286 ORTHO05D008395 3.4e-06 55.1 55 41.8
SpUn0048_0020 Schrenkiella parvula HOM05D041219 ORTHO05D008395 3.4e-06 55.1 55 41.8
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-06 54.7 49 46.9
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 5.9e-06 54.3 61 39.3
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 7.7e-06 53.9 64 42.2
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 7.7e-06 53.9 49 46.9
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 7.7e-06 53.9 73 34.2


User provided reference genes

Program Settings