Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p30160 Brassica napus HOM05D001579 ORTHO05D003470 5.1e-53 210.7 98 100.0
BolC6t38178H Brassica oleracea HOM05D001579 ORTHO05D003470 5.1e-53 210.7 98 100.0
BcaC08g45384 Brassica carinata HOM05D001579 ORTHO05D003470 9.6e-52 206.5 95 100.0
BcaB08g35003 Brassica carinata HOM05D001579 ORTHO05D003470 2.2e-40 168.7 102 79.4
Sp4g00870 Schrenkiella parvula HOM05D001579 ORTHO05D003470 7.2e-39 163.7 102 77.5
BcaC07g41119 Brassica carinata HOM05D001579 ORTHO05D003470 9.4e-39 163.3 99 77.8
Glyma.11G117800 Glycine max HOM05D001579 ORTHO05D003470 1.2e-38 162.9 99 75.8
Glyma.12G043200 Glycine max HOM05D001579 ORTHO05D003470 1.2e-38 162.9 99 75.8
Lj1g0020223 Lotus japonicus HOM05D001579 ORTHO05D003470 1.2e-38 162.9 99 75.8
Lalb_Chr03g0025681 Lupinus albus HOM05D001579 ORTHO05D003470 1.2e-38 162.9 99 75.8
Phvul.011G045200 Phaseolus vulgaris HOM05D001579 ORTHO05D003470 1.2e-38 162.9 99 75.8
VMungo1127G1806 Vigna mungo HOM05D001579 ORTHO05D003470 1.2e-38 162.9 99 75.8
Lj7A248G12 Lonicera japonica HOM05D001579 ORTHO05D003470 1.6e-38 162.5 99 77.8
vmacro11113 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 1.6e-38 162.5 99 76.8
Actinidia00524 Actinidia chinensis HOM05D001579 ORTHO05D003470 2.7e-38 161.8 99 77.8
A09p57990 Brassica napus HOM05D001579 ORTHO05D003470 2.7e-38 161.8 99 76.8
CSS0013099 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 2.7e-38 161.8 99 76.8
CSS0049673 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 2.7e-38 161.8 99 76.8
Migut.B00751 Erythranthe guttata HOM05D001579 ORTHO05D003470 2.7e-38 161.8 98 77.6
Lj3g0013700 Lotus japonicus HOM05D001579 ORTHO05D003470 2.7e-38 161.8 99 74.7
Lalb_Chr01g0002541 Lupinus albus HOM05D001579 ORTHO05D003470 2.7e-38 161.8 99 74.7
Actinidia27894 Actinidia chinensis HOM05D001579 ORTHO05D003470 3.6e-38 161.4 99 75.8
Ca_01102_v3 Cicer arietinum L. HOM05D001579 ORTHO05D003470 3.6e-38 161.4 99 74.7
Nn1g01939 Nelumbo nucifera HOM05D001579 ORTHO05D003470 3.6e-38 161.4 99 75.8
Sed0021732 Sechium edule HOM05D001579 ORTHO05D003470 3.6e-38 161.4 102 72.5
Hund14641 Selenicereus undatus HOM05D001579 ORTHO05D003470 3.6e-38 161.4 99 75.8
SalBow6G1678 Salvia bowleyana HOM05D001579 ORTHO05D003470 4.6e-38 161.0 98 76.5
Rhsim11G0177200 Rhododendron simsii HOM05D001579 ORTHO05D003470 6.1e-38 160.6 99 73.7
THA.LOC104804143 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 6.1e-38 160.6 98 78.6
GSVIVG01031967001 Vitis vinifera HOM05D001579 ORTHO05D003470 6.1e-38 160.6 99 75.8
AL7G11270 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 7.9e-38 160.2 98 78.6
CSS0031219 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 7.9e-38 160.2 99 75.8
Carub.0007s0120 Capsella rubella HOM05D001579 ORTHO05D003470 7.9e-38 160.2 98 78.6
CDE06G1318 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 7.9e-38 160.2 98 76.5
Duzib052G0487 Durio zibethinus HOM05D001579 ORTHO05D003470 7.9e-38 160.2 99 75.8
Pp3c2_16770 Physcomitrium patens HOM05D001579 ORTHO05D003470 7.9e-38 160.2 99 74.7
THA.LOC104824827 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 7.9e-38 160.2 98 78.6
AT4G39280 Arabidopsis thaliana HOM05D001579 ORTHO05D003470 1.0e-37 159.8 98 77.6
Cpa.g.sc62.152 Carica papaya HOM05D001579 ORTHO05D003470 1.0e-37 159.8 98 77.6
ECA240G1027 Erigeron canadensis HOM05D001579 ORTHO05D003470 1.0e-37 159.8 98 76.5
Glyma.17G231300 Glycine max HOM05D001579 ORTHO05D003470 1.0e-37 159.8 99 73.7
Psat7g141360 Pisum sativum HOM05D001579 ORTHO05D003470 1.0e-37 159.8 99 74.7
CsaV3_3G002020 Cucumis sativus L. HOM05D001579 ORTHO05D003470 1.4e-37 159.5 100 72.0
Medtr4g070040 Medicago truncatula HOM05D001579 ORTHO05D003470 1.4e-37 159.5 99 74.7
SalBow6G0592 Salvia bowleyana HOM05D001579 ORTHO05D003470 1.4e-37 159.5 98 75.5
TAR376G1017 Trochodendron aralioides HOM05D001579 ORTHO05D003470 1.4e-37 159.5 99 76.8
Aa31LG7G14810 Aethionema arabicum HOM05D001579 ORTHO05D003470 1.8e-37 159.1 98 77.6
AL4G10950 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 1.8e-37 159.1 99 77.8
CARHR247410 Cardamine hirsuta HOM05D001579 ORTHO05D003470 1.8e-37 159.1 98 76.5
CiPaw.05G064600 Carya illinoinensis HOM05D001579 ORTHO05D003470 1.8e-37 159.1 99 74.7
CDE04G1236 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 1.8e-37 159.1 98 75.5
MELO3C013873.2 Cucumis melo HOM05D001579 ORTHO05D003470 1.8e-37 159.1 100 71.0
HanXRQChr14g0437911 Helianthus annuus HOM05D001579 ORTHO05D003470 1.8e-37 159.1 98 76.5
Sc13g0008990 Simmondsia chinensis HOM05D001579 ORTHO05D003470 1.8e-37 159.1 98 77.6
BcaC02g08772 Brassica carinata HOM05D001579 ORTHO05D003470 2.3e-37 158.7 102 74.5
C04p50830 Brassica napus HOM05D001579 ORTHO05D003470 2.3e-37 158.7 102 74.5
BolC4t26677H Brassica oleracea HOM05D001579 ORTHO05D003470 2.3e-37 158.7 102 74.5
COL.COLO4_25932 Corchorus olitorius HOM05D001579 ORTHO05D003470 2.3e-37 158.7 98 75.5
Gohir.A04G130900 Gossypium hirsutum HOM05D001579 ORTHO05D003470 2.3e-37 158.7 99 73.7
Gohir.D04G167200 Gossypium hirsutum HOM05D001579 ORTHO05D003470 2.3e-37 158.7 99 73.7
Gorai.012G155500 Gossypium raimondii HOM05D001579 ORTHO05D003470 2.3e-37 158.7 99 73.7
HanXRQChr14g0446281 Helianthus annuus HOM05D001579 ORTHO05D003470 2.3e-37 158.7 98 76.5
Peaxi162Scf00016g00732 Petunia axillaris HOM05D001579 ORTHO05D003470 2.3e-37 158.7 99 76.8
Thecc.02G085100 Theobroma cacao HOM05D001579 ORTHO05D003470 2.3e-37 158.7 98 75.5
TWI79G0010 Tripterygium wilfordii HOM05D001579 ORTHO05D003470 2.3e-37 158.7 98 76.5
unitig_0.g66 Utricularia gibba HOM05D001579 ORTHO05D003470 2.3e-37 158.7 99 73.7
ATR0051G048 Amborella trichopoda HOM05D001579 ORTHO05D003470 3.0e-37 158.3 99 73.7
Ciclev10028310m.g Citrus clementina HOM05D001579 ORTHO05D003470 3.0e-37 158.3 98 76.5
Lsat_1_v5_gn_2_67440 Lactuca sativa HOM05D001579 ORTHO05D003470 3.0e-37 158.3 98 76.5
Eucgr.D00245 Eucalyptus grandis HOM05D001579 ORTHO05D003470 3.9e-37 157.9 97 77.3
Thhalv10007412m.g Eutrema salsugineum HOM05D001579 ORTHO05D003470 3.9e-37 157.9 97 77.3
MBI01_g34891_MAGBIO Magnolia biondii HOM05D001579 ORTHO05D003470 3.9e-37 157.9 99 73.7
MD05G1066200 Malus domestica HOM05D001579 ORTHO05D003470 3.9e-37 157.9 98 75.5
Oeu015994.1 Olea europaea HOM05D001579 ORTHO05D003470 3.9e-37 157.9 98 75.5
Oeu041647.1 Olea europaea HOM05D001579 ORTHO05D003470 3.9e-37 157.9 98 75.5
Prupe.8G096800 Prunus persica HOM05D001579 ORTHO05D003470 3.9e-37 157.9 98 75.5
TPR.G19411 Trifolium pratense HOM05D001579 ORTHO05D003470 3.9e-37 157.9 99 73.7
Atru.chr5.3017 Acer truncatum HOM05D001579 ORTHO05D003470 5.1e-37 157.5 99 74.7
EL10Ac3g05071 Beta vulgaris HOM05D001579 ORTHO05D003470 5.1e-37 157.5 99 73.7
AUR62003165 Chenopodium quinoa HOM05D001579 ORTHO05D003470 5.1e-37 157.5 99 73.7
AUR62034498 Chenopodium quinoa HOM05D001579 ORTHO05D003470 5.1e-37 157.5 99 73.7
ClCG10G001880 Citrullus lanatus HOM05D001579 ORTHO05D003470 5.1e-37 157.5 100 70.0
Hund11566 Selenicereus undatus HOM05D001579 ORTHO05D003470 5.1e-37 157.5 99 75.8
TPR.G23438 Trifolium pratense HOM05D001579 ORTHO05D003470 5.1e-37 157.5 99 73.7
MSTRG.16808 Avicennia marina HOM05D001579 ORTHO05D003470 6.7e-37 157.1 98 73.5
BraA04t17272Z Brassica rapa HOM05D001579 ORTHO05D003470 6.7e-37 157.1 102 72.5
Ah.02g117280 Amaranthus hybridus HOM05D001579 ORTHO05D003470 8.8e-37 156.8 99 72.7
Carub.0005s1088 Capsella rubella HOM05D001579 ORTHO05D003470 8.8e-37 156.8 98 76.5
AUR62034190 Chenopodium quinoa HOM05D001579 ORTHO05D003470 8.8e-37 156.8 99 73.7
CAN.G1298.23 Capsicum annuum HOM05D001579 ORTHO05D003470 1.5e-36 156.0 98 74.5
PGR042G0613 Punica granatum HOM05D001579 ORTHO05D003470 1.5e-36 156.0 98 74.5
RcHm_v2.0_Chr6g0264251 Rosa chinensis HOM05D001579 ORTHO05D003470 1.5e-36 156.0 100 75.0
QL11p043704 Quercus lobata HOM05D001579 ORTHO05D003470 2.0e-36 155.6 98 74.5
CAN.G1412.7 Capsicum annuum HOM05D001579 ORTHO05D003470 2.5e-36 155.2 98 74.5
MD10G1076200 Malus domestica HOM05D001579 ORTHO05D003470 2.5e-36 155.2 98 75.5
Nitab4.5_0000974g0080 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.5e-36 155.2 98 74.5
Solyc02g090860.3 Solanum lycopersicum HOM05D001579 ORTHO05D003470 2.5e-36 155.2 98 74.5
Solyc10g007060.4 Solanum lycopersicum HOM05D001579 ORTHO05D003470 2.5e-36 155.2 98 74.5
Sopen02g035480 Solanum pennellii HOM05D001579 ORTHO05D003470 2.5e-36 155.2 98 74.5
Sopen10g002960 Solanum pennellii HOM05D001579 ORTHO05D003470 2.5e-36 155.2 98 74.5
PGSC0003DMG400004021 Solanum tuberosum HOM05D001579 ORTHO05D003470 2.5e-36 155.2 98 74.5
PGSC0003DMG400025010 Solanum tuberosum HOM05D001579 ORTHO05D003470 2.5e-36 155.2 98 74.5
A04p16340 Brassica napus HOM05D001579 ORTHO05D003470 3.3e-36 154.8 100 72.0
FvH4_2g08790 Fragaria vesca HOM05D001579 ORTHO05D003470 3.3e-36 154.8 100 74.0
FAN15G0032 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.3e-36 154.8 100 74.0
FAN20G1104 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.3e-36 154.8 100 74.0
FAN27G2756 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.3e-36 154.8 100 74.0
Manes.17G101200 Manihot esculenta HOM05D001579 ORTHO05D003470 4.3e-36 154.5 98 74.5
Nitab4.5_0011688g0020 Nicotiana tabacum HOM05D001579 ORTHO05D003470 4.3e-36 154.5 98 73.5
CANSAT80G0427 Cannabis sativa HOM05D001579 ORTHO05D003470 5.7e-36 154.1 98 72.4
AagrBONN_evm.TU.Sc2ySwM_344.2010 Anthoceros agrestis HOM05D001579 ORTHO05D003470 7.4e-36 153.7 99 70.7
CARHR265880 Cardamine hirsuta HOM05D001579 ORTHO05D003470 7.4e-36 153.7 98 75.5
arahy.Tifrunner.gnm1.ann1.D5Q7RU Arachis hypogaea HOM05D001579 ORTHO05D003470 9.7e-36 153.3 98 73.5
Cfa005003 Carpinus fangiana HOM05D001579 ORTHO05D003470 9.7e-36 153.3 98 73.5
Haze_02385 Corylus avellana HOM05D001579 ORTHO05D003470 9.7e-36 153.3 98 73.5
FAN16G0460 Fragaria x ananassa HOM05D001579 ORTHO05D003470 9.7e-36 153.3 99 73.7
FAN16G2055 Fragaria x ananassa HOM05D001579 ORTHO05D003470 9.7e-36 153.3 99 73.7
FAN21G0623 Fragaria x ananassa HOM05D001579 ORTHO05D003470 9.7e-36 153.3 99 73.7
BcaB06g27782 Brassica carinata HOM05D001579 ORTHO05D003470 1.3e-35 152.9 102 74.5
FvH4_3g28200 Fragaria vesca HOM05D001579 ORTHO05D003470 1.3e-35 152.9 99 73.7
FAN11G3917 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.3e-35 152.9 99 73.7
Hma1.2p1_0633F.1_g192550 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.3e-35 152.9 98 73.5
Hma1.2p1_1375F.1_g279070 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.3e-35 152.9 98 73.5
SEGI_28257 Sequoiadendron giganteum HOM05D001579 ORTHO05D003470 1.7e-35 152.5 99 70.7
Sabra04G0102800 Salix brachista HOM05D001579 ORTHO05D003470 2.2e-35 152.1 99 71.7
Os10g0400800 Oryza sativa ssp. japonica HOM05D001579 ORTHO05D003470 2.8e-35 151.8 99 70.7
SMO119G0093 Selaginella moellendorffii HOM05D001579 ORTHO05D003470 2.8e-35 151.8 106 67.9
BcaB03g12963 Brassica carinata HOM05D001579 ORTHO05D003470 3.7e-35 151.4 100 73.0
Potri.004G155000 Populus trichocarpa HOM05D001579 ORTHO05D003470 3.7e-35 151.4 98 72.4
Carub.0004s0076 Capsella rubella HOM05D001579 ORTHO05D003470 4.8e-35 151.0 99 71.7
Nitab4.5_0004172g0030 Nicotiana tabacum HOM05D001579 ORTHO05D003470 4.8e-35 151.0 99 70.7
Cre09.g389430 Chlamydomonas reinhardtii HOM05D001579 ORTHO05D003470 6.3e-35 150.6 98 68.4
Zm00001eb255720 Zea mays HOM05D001579 ORTHO05D003470 6.3e-35 150.6 98 71.4
PSO447G0328 Papaver somniferum HOM05D001579 ORTHO05D003470 8.2e-35 150.2 99 70.7
FAN24G0111 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.1e-34 149.8 107 68.2
Mapoly0012s0145 Marchantia polymorpha HOM05D001579 ORTHO05D003470 1.1e-34 149.8 98 71.4
Nitab4.5_0000308g0090 Nicotiana tabacum HOM05D001579 ORTHO05D003470 1.1e-34 149.8 98 71.4
Hma1.2p1_0299F.1_g117910 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.4e-34 149.4 98 71.4
Potri.009G116100 Populus trichocarpa HOM05D001579 ORTHO05D003470 1.8e-34 149.1 99 69.7
RcHm_v2.0_Chr7g0204471 Rosa chinensis HOM05D001579 ORTHO05D003470 1.8e-34 149.1 98 69.4
PSO478G3633 Papaver somniferum HOM05D001579 ORTHO05D003470 2.4e-34 148.7 98 70.4
PRCOL_00000627 Prasinoderma coloniale HOM05D001579 ORTHO05D003470 2.4e-34 148.7 99 67.7
ATR1101G101 Amborella trichopoda HOM05D001579 ORTHO05D003470 2.0e-33 145.6 97 71.1
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 5.9e-33 144.1 122 59.0
MCO10G005 Micromonas commoda HOM05D001579 ORTHO05D003470 1.3e-32 142.9 98 65.3
Aqoxy7G01384 Aquilegia oxysepala HOM05D001579 ORTHO05D003470 6.5e-32 140.6 98 67.3
CSS0030455 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 1.1e-31 139.8 81 80.2
CiPaw.01G010000 Carya illinoinensis HOM05D001579 ORTHO05D003470 1.1e-31 139.8 92 72.8
Cc00_g17000 Coffea canephora HOM05D001579 ORTHO05D003470 4.2e-31 137.9 72 81.9
SalBow6G2679 Salvia bowleyana HOM05D001579 ORTHO05D003470 7.2e-31 137.1 124 57.3
BcaB03g15109 Brassica carinata HOM05D001579 ORTHO05D003470 2.1e-30 135.6 91 74.7
BcaC08g46255 Brassica carinata HOM05D001579 ORTHO05D003470 2.1e-30 135.6 92 72.8
TAR628G1064 Trochodendron aralioides HOM05D001579 ORTHO05D003470 1.4e-29 132.9 83 75.9
DCAR_006198 Daucus carota HOM05D001579 ORTHO05D003470 2.3e-29 132.1 165 46.7
QL11p043604 Quercus lobata HOM05D001579 ORTHO05D003470 2.0e-28 129.0 69 82.6
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 2.6e-28 128.6 82 73.2
vmacro02105 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 3.1e-26 121.7 108 58.3
PSO170G0890 Papaver somniferum HOM05D001579 ORTHO05D003470 5.3e-26 120.9 98 61.2
Cfa025854 Carpinus fangiana HOM05D001579 ORTHO05D003470 3.5e-25 118.2 96 56.2
Haze_27501 Corylus avellana HOM05D001579 ORTHO05D003470 5.9e-25 117.5 93 58.1
SGA_v2.0_scaffold32G13167 Striga asiatica HOM05D001579 ORTHO05D003470 2.7e-22 108.6 84 64.3
CARHR112710 Cardamine hirsuta HOM05D001579 ORTHO05D003470 1.5e-20 102.8 54 85.2
C08p41200 Brassica napus HOM05D001579 ORTHO05D003470 4.4e-20 101.3 64 75.0
BolC8t51687H Brassica oleracea HOM05D001579 ORTHO05D003470 4.4e-20 101.3 64 75.0
Lj2C359T3 Lonicera japonica HOM05D001579 ORTHO05D003470 4.4e-20 101.3 64 75.0
Lj7C253T7 Lonicera japonica HOM05D001579 ORTHO05D003470 4.4e-20 101.3 64 75.0
Duzib132G0542 Durio zibethinus HOM05D001579 ORTHO05D003470 5.7e-20 100.9 70 68.6
BcaC08g46254 Brassica carinata HOM05D001579 ORTHO05D003470 9.7e-20 100.1 60 80.0
SGA_v2.0_scaffold58G20534 Striga asiatica HOM05D001579 ORTHO05D003470 9.7e-20 100.1 64 71.9
BraA09t41189Z Brassica rapa HOM05D001579 ORTHO05D003470 1.3e-19 99.8 64 73.4
CiPaw.01G010500 Carya illinoinensis HOM05D001579 ORTHO05D003470 1.3e-19 99.8 64 73.4
CiPaw.01G010800 Carya illinoinensis HOM05D001579 ORTHO05D003470 1.3e-19 99.8 64 73.4
CBR_g23301 Chara braunii HOM05D001579 ORTHO05D003470 2.4e-18 95.5 64 70.3
CARHR112730 Cardamine hirsuta HOM05D001579 ORTHO05D003470 2.6e-17 92.0 64 68.8
SalBow6G3810 Salvia bowleyana HOM05D001579 ORTHO05D003470 5.0e-16 87.8 118 43.2
arahy.Tifrunner.gnm1.ann1.L5L68D Arachis hypogaea HOM05D001579 ORTHO05D005341 1.5e-07 59.7 46 63.0


User provided reference genes

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