Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t38027H Brassica oleracea HOM05D008605 ORTHO05D010568 5.2e-41 170.6 87 100.0
A07p26220 Brassica napus HOM05D008605 ORTHO05D010568 2.0e-37 158.7 87 96.6
BraA07t30266Z Brassica rapa HOM05D000756 ORTHO05D000604 2.9e-31 138.3 77 94.8
AT3G63088 Arabidopsis thaliana HOM05D008605 ORTHO05D010568 2.0e-16 89.0 49 87.8
AL5G45910 Arabidopsis lyrata HOM05D008605 ORTHO05D010568 3.4e-16 88.2 54 79.6
A09p54900 Brassica napus HOM05D008605 ORTHO05D010568 3.2e-14 81.6 50 88.0
BolC8t51359H Brassica oleracea HOM05D008605 ORTHO05D010568 4.2e-14 81.3 50 86.0
CARHR173390 Cardamine hirsuta HOM05D008605 ORTHO05D010568 1.2e-13 79.7 51 82.4
Carub.0005s2974 Capsella rubella HOM05D008605 ORTHO05D010568 2.7e-13 78.6 49 81.6
BraA09t40899Z Brassica rapa HOM05D008605 ORTHO05D010568 1.3e-12 76.3 50 84.0
CANSAT25G0728 Cannabis sativa HOM05D008605 ORTHO05D010568 1.4e-09 66.2 52 65.4
CiPaw.07G094000 Carya illinoinensis HOM05D008605 ORTHO05D010568 1.2e-08 63.2 51 64.7
Gohir.A12G006000 Gossypium hirsutum HOM05D008605 ORTHO05D010568 1.5e-08 62.8 42 66.7
Gohir.D12G005500 Gossypium hirsutum HOM05D008605 ORTHO05D010568 1.5e-08 62.8 42 66.7
Manes.01G209600 Manihot esculenta HOM05D008605 ORTHO05D010568 2.0e-08 62.4 40 67.5
Prupe.8G244200 Prunus persica HOM05D008605 ORTHO05D010568 2.0e-08 62.4 47 57.4
Gohir.A08G069550 Gossypium hirsutum HOM05D008605 ORTHO05D010568 2.6e-08 62.0 42 66.7
Gohir.D08G077866 Gossypium hirsutum HOM05D008605 ORTHO05D010568 2.6e-08 62.0 42 66.7
Gorai.004G082900 Gossypium raimondii HOM05D008605 ORTHO05D010568 2.6e-08 62.0 42 66.7
TWI14G1197 Tripterygium wilfordii HOM05D008605 ORTHO05D010568 2.6e-08 62.0 40 67.5
Potri.014G138900 Populus trichocarpa HOM05D008605 ORTHO05D010568 3.4e-08 61.6 40 67.5
Manes.05G073900 Manihot esculenta HOM05D008605 ORTHO05D010568 4.4e-08 61.2 40 67.5
Duzib138G1813 Durio zibethinus HOM05D008605 ORTHO05D010568 5.8e-08 60.8 40 70.0
THA.LOC109116199 Tarenaya hassleriana HOM05D008605 ORTHO05D010568 7.6e-08 60.5 34 73.5
Glyma.02G149000 Glycine max HOM05D008605 ORTHO05D010568 9.9e-08 60.1 49 55.1
Duzib211G0117 Durio zibethinus HOM05D008605 ORTHO05D010568 1.7e-07 59.3 35 74.3
Gohir.A11G121301 Gossypium hirsutum HOM05D008605 ORTHO05D010568 2.2e-07 58.9 37 70.3
Gohir.D11G126400 Gossypium hirsutum HOM05D008605 ORTHO05D010568 2.2e-07 58.9 37 70.3
Gorai.007G135100 Gossypium raimondii HOM05D008605 ORTHO05D010568 2.2e-07 58.9 37 70.3
Nn1g02155 Nelumbo nucifera HOM05D008605 ORTHO05D010568 2.9e-07 58.5 44 59.1
Nn1g02156 Nelumbo nucifera HOM05D008605 ORTHO05D010568 2.9e-07 58.5 44 59.1
Glyma.10G024900 Glycine max HOM05D008605 ORTHO05D010568 3.8e-07 58.2 49 57.1
Phvul.007G169700 Phaseolus vulgaris HOM05D008605 ORTHO05D010568 3.8e-07 58.2 49 55.1
CAN.G609.5 Capsicum annuum HOM05D008605 ORTHO05D010568 4.9e-07 57.8 49 53.1
CiPaw.08G103500 Carya illinoinensis HOM05D008605 ORTHO05D010568 4.9e-07 57.8 40 67.5
Hma1.2p1_0035F.1_g021920 Hydrangea macrophylla HOM05D008605 ORTHO05D010568 4.9e-07 57.8 36 63.9
Hma1.2p1_0628F.1_g191950 Hydrangea macrophylla HOM05D008605 ORTHO05D010568 6.4e-07 57.4 50 58.0
Phvul.001G149100 Phaseolus vulgaris HOM05D008605 ORTHO05D010568 1.4e-06 56.2 46 54.3
Manes.03G185200 Manihot esculenta HOM05D013078 ORTHO05D010568 1.9e-06 55.8 41 58.5


User provided reference genes

Program Settings