Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t37894H Brassica oleracea HOM05D035248 ORTHO05D000925 4.9e-55 217.6 114 100.0
BcaC07g39054 Brassica carinata HOM05D001239 ORTHO05D000925 6.2e-26 120.9 98 67.3
BraA08t32647Z Brassica rapa HOM05D001239 ORTHO05D000925 2.2e-23 112.5 97 64.9
BolC2t11079H Brassica oleracea HOM05D001239 ORTHO05D000925 2.1e-21 105.9 95 62.1
BolC3t19983H Brassica oleracea HOM05D001239 ORTHO05D000925 3.0e-20 102.1 106 59.4
BraA01t04462Z Brassica rapa HOM05D001239 ORTHO05D000925 9.6e-19 97.1 78 66.7
BraA01t01839Z Brassica rapa HOM05D001239 ORTHO05D000925 3.6e-18 95.1 79 64.6
C06p27190 Brassica napus HOM05D035248 ORTHO05D040869 3.1e-17 92.0 45 100.0
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-17 90.9 96 49.0
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 6.4e-15 84.3 86 48.8
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 5.4e-14 81.3 105 46.7
BolC5t29933H Brassica oleracea HOM05D001239 ORTHO05D000925 7.1e-14 80.9 88 47.7
BraA03t15429Z Brassica rapa HOM05D001239 ORTHO05D000925 7.9e-13 77.4 95 45.3
BcaC03g15774 Brassica carinata HOM05D001239 ORTHO05D000925 3.0e-12 75.5 100 45.0
AL8G23160 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 6.7e-12 74.3 98 46.9
BcaB07g32430 Brassica carinata HOM05D001239 ORTHO05D000925 8.7e-12 73.9 100 45.0
BcaC01g05560 Brassica carinata HOM05D001239 ORTHO05D000925 8.7e-12 73.9 100 44.0
BcaC03g13424 Brassica carinata HOM05D001239 ORTHO05D000925 8.7e-12 73.9 99 40.4
BolC2t06689H Brassica oleracea HOM05D001239 ORTHO05D000925 8.7e-12 73.9 99 40.4
BolC2t07957H Brassica oleracea HOM05D001239 ORTHO05D000925 1.1e-11 73.6 58 63.8
BcaC03g15550 Brassica carinata HOM05D001239 ORTHO05D000925 2.5e-11 72.4 99 42.4
BcaC04g21158 Brassica carinata HOM05D001239 ORTHO05D000925 3.3e-11 72.0 110 40.0
C06p09750 Brassica napus HOM05D001239 ORTHO05D000925 4.3e-11 71.6 97 44.3
BcaB08g35967 Brassica carinata HOM05D001239 ORTHO05D000925 7.4e-11 70.9 103 39.8
BcaB07g33890 Brassica carinata HOM05D001239 ORTHO05D000925 9.6e-11 70.5 98 38.8
C02p54670 Brassica napus HOM05D001239 ORTHO05D000925 9.6e-11 70.5 104 39.4
BraA03t13628Z Brassica rapa HOM05D001239 ORTHO05D000925 9.6e-11 70.5 96 44.8
BcaC09g50004 Brassica carinata HOM05D001239 ORTHO05D000925 1.6e-10 69.7 86 43.0
BcaNung02294 Brassica carinata HOM05D001239 ORTHO05D000925 1.6e-10 69.7 106 37.7
C07p05040 Brassica napus HOM05D001239 ORTHO05D000925 2.1e-10 69.3 58 63.8
BolC8t51140H Brassica oleracea HOM05D001239 ORTHO05D000925 2.1e-10 69.3 102 43.1
Thhalv10011015m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 2.8e-10 68.9 97 38.1
BcaB04g18102 Brassica carinata HOM05D001239 ORTHO05D000925 3.6e-10 68.6 90 42.2
C06p07680 Brassica napus HOM05D001239 ORTHO05D000925 3.6e-10 68.6 85 45.9
BolC6t38044H Brassica oleracea HOM05D001239 ORTHO05D000925 3.6e-10 68.6 94 43.6
BcaC08g43399 Brassica carinata HOM05D001239 ORTHO05D000925 4.8e-10 68.2 93 43.0
BolC2t09268H Brassica oleracea HOM05D001239 ORTHO05D000925 4.8e-10 68.2 99 41.4
BraA03t12511Z Brassica rapa HOM05D001239 ORTHO05D000925 6.2e-10 67.8 96 43.8
Thhalv10019636m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 1.1e-09 67.0 98 36.7
BcaB04g19606 Brassica carinata HOM05D001239 ORTHO05D000925 1.4e-09 66.6 86 46.5
A06p31790 Brassica napus HOM05D001239 ORTHO05D000925 1.4e-09 66.6 96 41.7
Thhalv10000609m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 1.4e-09 66.6 87 43.7
BcaB01g03722 Brassica carinata HOM05D001239 ORTHO05D000925 1.8e-09 66.2 98 42.9
BraA02t06522Z Brassica rapa HOM05D001239 ORTHO05D000925 2.4e-09 65.9 101 38.6
BolC4t22146H Brassica oleracea HOM05D001239 ORTHO05D000925 3.1e-09 65.5 88 39.8
BolC6t35269H Brassica oleracea HOM05D001239 ORTHO05D000925 3.1e-09 65.5 96 43.8
BcaC01g03544 Brassica carinata HOM05D001239 ORTHO05D000925 4.0e-09 65.1 99 39.4
BolC4t26714H Brassica oleracea HOM05D001239 ORTHO05D000925 4.0e-09 65.1 101 44.6
BolC6t38608H Brassica oleracea HOM05D001239 ORTHO05D000925 4.0e-09 65.1 95 42.1
BolC7t44839H Brassica oleracea HOM05D001239 ORTHO05D000925 4.0e-09 65.1 95 42.1
Thhalv10002326m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 4.0e-09 65.1 88 44.3
BolC2t08127H Brassica oleracea HOM05D010756 ORTHO05D000925 6.9e-09 64.3 111 38.7
BraA02t06066Z Brassica rapa HOM05D001239 ORTHO05D000925 6.9e-09 64.3 99 40.4
BcaC01g00166 Brassica carinata HOM05D001239 ORTHO05D000925 9.0e-09 63.9 90 42.2
BcaC08g44422 Brassica carinata HOM05D001239 ORTHO05D017499 9.0e-09 63.9 86 44.2
BraA07t28829Z Brassica rapa HOM05D001239 ORTHO05D000925 9.0e-09 63.9 69 53.6
BcaB01g02457 Brassica carinata HOM05D001239 ORTHO05D000925 1.2e-08 63.5 100 37.0
AL9U10020 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 1.5e-08 63.2 98 38.8
BolC6t38967H Brassica oleracea HOM05D001239 ORTHO05D000925 1.5e-08 63.2 99 39.4
BcaB06g27275 Brassica carinata HOM05D001239 ORTHO05D000925 2.0e-08 62.8 109 37.6
BcaC07g38780 Brassica carinata HOM05D001239 ORTHO05D000925 2.0e-08 62.8 84 42.9
A07p25350 Brassica napus HOM05D035248 ORTHO05D040869 2.0e-08 62.8 32 90.6
C06p10980 Brassica napus HOM05D001239 ORTHO05D000925 2.0e-08 62.8 86 46.5
BolC6t35566H Brassica oleracea HOM05D001239 ORTHO05D000925 2.0e-08 62.8 107 34.6
BolC8t49338H Brassica oleracea HOM05D001239 ORTHO05D000925 2.0e-08 62.8 84 42.9
BolC8t49699H Brassica oleracea HOM05D001239 ORTHO05D000925 2.0e-08 62.8 95 41.1
BcaC03g15329 Brassica carinata HOM05D001239 ORTHO05D000925 2.6e-08 62.4 95 38.9
BraA02t08257Z Brassica rapa HOM05D013375 ORTHO05D020010 2.6e-08 62.4 85 44.7
AT4G09490 Arabidopsis thaliana HOM05D001239 ORTHO05D000925 4.5e-08 61.6 84 45.2
BolC7t44282H Brassica oleracea HOM05D001239 ORTHO05D000925 4.5e-08 61.6 99 35.4
BcaC07g42703 Brassica carinata HOM05D001239 ORTHO05D000925 5.8e-08 61.2 96 40.6
C07p20360 Brassica napus HOM05D001239 ORTHO05D000925 5.8e-08 61.2 93 38.7
BolC8t52842H Brassica oleracea HOM05D000003 ORTHO05D000925 5.8e-08 61.2 85 37.6
BcaB03g15427 Brassica carinata HOM05D001239 ORTHO05D000925 7.6e-08 60.8 98 39.8
BcaB04g17764 Brassica carinata HOM05D001239 ORTHO05D000925 7.6e-08 60.8 111 35.1
BcaB04g19833 Brassica carinata HOM05D001239 ORTHO05D000925 7.6e-08 60.8 92 43.5
BcaB06g28514 Brassica carinata HOM05D001239 ORTHO05D000925 7.6e-08 60.8 95 38.9
C02p49620 Brassica napus HOM05D001239 ORTHO05D000925 7.6e-08 60.8 92 39.1
BcaC04g22623 Brassica carinata HOM05D001239 ORTHO05D000925 9.9e-08 60.5 101 37.6
BolC2t07764H Brassica oleracea HOM05D001239 ORTHO05D000925 9.9e-08 60.5 86 44.2
BolC6t35664H Brassica oleracea HOM05D008653 ORTHO05D000925 9.9e-08 60.5 91 40.7
BolC6t39320H Brassica oleracea HOM05D001239 ORTHO05D000925 9.9e-08 60.5 85 42.4
BraA07t28335Z Brassica rapa HOM05D001239 ORTHO05D000925 9.9e-08 60.5 86 43.0
BolC7t44271H Brassica oleracea HOM05D001239 ORTHO05D000925 1.3e-07 60.1 99 34.3
BolC9t58220H Brassica oleracea HOM05D008653 ORTHO05D000925 1.3e-07 60.1 87 41.4
BraA09t37984Z Brassica rapa HOM05D001239 ORTHO05D000925 1.3e-07 60.1 90 36.7
BolC3t21245H Brassica oleracea HOM05D001239 ORTHO05D000925 1.7e-07 59.7 85 36.5
BraA01t00376Z Brassica rapa HOM05D001239 ORTHO05D000925 1.7e-07 59.7 107 37.4
BolC1t05667H Brassica oleracea HOM05D001444 ORTHO05D003766 2.2e-07 59.3 105 39.0
BolC7t42556H Brassica oleracea HOM05D001239 ORTHO05D000925 2.2e-07 59.3 93 37.6
BraA10t42971Z Brassica rapa HOM05D001239 ORTHO05D000925 2.2e-07 59.3 95 35.8
AL3G48000 Arabidopsis lyrata HOM05D012944 ORTHO05D014028 2.9e-07 58.9 98 40.8
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-07 58.9 107 41.1
BolC2t11040H Brassica oleracea HOM05D001239 ORTHO05D000925 2.9e-07 58.9 92 38.0
BcaC01g02035 Brassica carinata HOM05D001239 ORTHO05D000925 3.8e-07 58.5 107 35.5
BcaC06g34537 Brassica carinata HOM05D001239 ORTHO05D000925 3.8e-07 58.5 92 37.0
C07p26790 Brassica napus HOM05D001239 ORTHO05D000925 3.8e-07 58.5 106 34.9
BolC1t03157H Brassica oleracea HOM05D010756 ORTHO05D000925 3.8e-07 58.5 92 40.2
BolC4t26795H Brassica oleracea HOM05D013375 ORTHO05D020010 3.8e-07 58.5 85 35.3
BolC7t42161H Brassica oleracea HOM05D008653 ORTHO05D000925 3.8e-07 58.5 91 39.6
BraA06t26944Z Brassica rapa HOM05D008653 ORTHO05D000925 3.8e-07 58.5 89 37.1
BraA08t33512Z Brassica rapa HOM05D001239 ORTHO05D000925 3.8e-07 58.5 95 35.8
AL7G15770 Arabidopsis lyrata HOM05D011429 ORTHO05D000925 4.9e-07 58.2 103 36.9
C06p08080 Brassica napus HOM05D001239 ORTHO05D000925 4.9e-07 58.2 97 38.1
CARHR217600 Cardamine hirsuta HOM05D001239 ORTHO05D000925 4.9e-07 58.2 85 42.4
BolC7t42027H Brassica oleracea HOM05D001239 ORTHO05D000925 6.4e-07 57.8 95 41.1
BraA04t17503Z Brassica rapa HOM05D001239 ORTHO05D000925 6.4e-07 57.8 95 36.8
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 6.4e-07 57.8 94 39.4
BcaB04g18173 Brassica carinata HOM05D001239 ORTHO05D000925 8.4e-07 57.4 108 37.0
BolC3t21199H Brassica oleracea HOM05D001239 ORTHO05D000925 8.4e-07 57.4 107 35.5
BolC9t58145H Brassica oleracea HOM05D001239 ORTHO05D000925 8.4e-07 57.4 95 38.9
BraA08t34484Z Brassica rapa HOM05D008653 ORTHO05D000925 8.4e-07 57.4 88 39.8
BraA08t35548Z Brassica rapa HOM05D001239 ORTHO05D000925 8.4e-07 57.4 87 36.8
Thhalv10001854m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 8.4e-07 57.4 103 35.9
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-06 57.0 105 41.0
C03p13660 Brassica napus HOM05D001239 ORTHO05D000925 1.1e-06 57.0 85 38.8
C03p52090 Brassica napus HOM05D001239 ORTHO05D000925 1.1e-06 57.0 99 35.4
BolC3t17489H Brassica oleracea HOM05D001239 ORTHO05D000925 1.1e-06 57.0 99 35.4
BolC8t47143H Brassica oleracea HOM05D039426 ORTHO05D033391 1.1e-06 57.0 64 46.9
BraA04t18944Z Brassica rapa HOM05D008653 ORTHO05D000925 1.1e-06 57.0 93 38.7
BraA07t28139Z Brassica rapa HOM05D001239 ORTHO05D000925 1.1e-06 57.0 84 40.5
CARHR153540 Cardamine hirsuta HOM05D001239 ORTHO05D000925 1.1e-06 57.0 85 37.6
BcaC02g10519 Brassica carinata HOM05D001239 ORTHO05D000925 1.4e-06 56.6 98 37.8
BNapus_Darmor_BZH_scaffold_229p00140 Brassica napus HOM05D001239 ORTHO05D000925 1.4e-06 56.6 100 36.0
BolC4t26908H Brassica oleracea HOM05D001239 ORTHO05D000925 1.4e-06 56.6 89 38.2
BolC7t43208H Brassica oleracea HOM05D001239 ORTHO05D000925 1.4e-06 56.6 103 35.0
Thhalv10023927m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 1.4e-06 56.6 91 44.0
BcaC05g28546 Brassica carinata HOM05D000003 ORTHO05D000006 1.9e-06 56.2 102 37.3
BcaNung00296 Brassica carinata HOM05D001239 ORTHO05D000925 1.9e-06 56.2 83 38.6
A02p15660 Brassica napus HOM05D008478 ORTHO05D000925 1.9e-06 56.2 95 36.8
BraA07t29530Z Brassica rapa HOM05D001239 ORTHO05D000925 1.9e-06 56.2 106 40.6
BraA10t42534Z Brassica rapa HOM05D001239 ORTHO05D000925 1.9e-06 56.2 85 40.0
BcaC01g01483 Brassica carinata HOM05D001239 ORTHO05D000925 2.4e-06 55.8 109 36.7
BcaC05g27689 Brassica carinata HOM05D001239 ORTHO05D000925 2.4e-06 55.8 103 34.0
BolC3t19864H Brassica oleracea HOM05D001239 ORTHO05D000925 2.4e-06 55.8 85 38.8
BolC4t23405H Brassica oleracea HOM05D001239 ORTHO05D000925 2.4e-06 55.8 79 41.8
BraA09t39140Z Brassica rapa HOM05D030509 ORTHO05D000925 2.4e-06 55.8 93 37.6
Thhalv10005465m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 2.4e-06 55.8 88 43.2
BolC2t10715H Brassica oleracea HOM05D001239 ORTHO05D000925 3.2e-06 55.5 107 33.6
BolC4t26780H Brassica oleracea HOM05D001239 ORTHO05D000925 3.2e-06 55.5 105 40.0
BolC5t33152H Brassica oleracea HOM05D001239 ORTHO05D000925 3.2e-06 55.5 94 38.3
BolC7t42937H Brassica oleracea HOM05D001239 ORTHO05D000925 3.2e-06 55.5 109 35.8
BraA02t06627Z Brassica rapa HOM05D008478 ORTHO05D000925 3.2e-06 55.5 95 36.8
TWI38G0639 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 3.2e-06 55.5 94 41.5
A06p41350 Brassica napus HOM05D008478 ORTHO05D000925 4.2e-06 55.1 99 39.4
C08p32300 Brassica napus HOM05D010756 ORTHO05D000925 4.2e-06 55.1 91 37.4
BolC8t50844H Brassica oleracea HOM05D010756 ORTHO05D000925 4.2e-06 55.1 91 37.4
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 4.2e-06 55.1 99 39.4
C08p07270 Brassica napus HOM05D001239 ORTHO05D000925 5.5e-06 54.7 87 34.5
BolC2t11528H Brassica oleracea HOM05D023979 ORTHO05D000925 5.5e-06 54.7 101 34.7
BolC8t47569H Brassica oleracea HOM05D001239 ORTHO05D000925 5.5e-06 54.7 87 34.5
BolC8t52815H Brassica oleracea HOM05D001239 ORTHO05D000925 5.5e-06 54.7 99 38.4
BraA02t04989Z Brassica rapa HOM05D000003 ORTHO05D000925 5.5e-06 54.7 93 37.6
BcaC02g09573 Brassica carinata HOM05D001239 ORTHO05D000925 7.1e-06 54.3 95 36.8
BolC4t26004H Brassica oleracea HOM05D008478 ORTHO05D000925 7.1e-06 54.3 95 36.8
BolC4t27264H Brassica oleracea HOM05D001239 ORTHO05D000925 7.1e-06 54.3 73 43.8
BolC5t33627H Brassica oleracea HOM05D001239 ORTHO05D000925 7.1e-06 54.3 92 38.0
BolC7t42900H Brassica oleracea HOM05D020595 ORTHO05D028119 7.1e-06 54.3 93 35.5
BolC8t50147H Brassica oleracea HOM05D023979 ORTHO05D000925 7.1e-06 54.3 93 37.6
BraA08t33225Z Brassica rapa HOM05D001239 ORTHO05D000925 7.1e-06 54.3 94 38.3
Prupe.1G202000 Prunus persica HOM05D000003 ORTHO05D000004 7.1e-06 54.3 99 37.4
BcaC02g06989 Brassica carinata HOM05D001239 ORTHO05D000925 9.3e-06 53.9 87 37.9
BraA06t24059Z Brassica rapa HOM05D001239 ORTHO05D000925 9.3e-06 53.9 108 36.1
CARHR160220 Cardamine hirsuta HOM05D001239 ORTHO05D000925 9.3e-06 53.9 82 39.0


User provided reference genes

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