Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 3.4e-140 501.9 296 100.0
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 2.5e-111 406.0 223 96.0
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 4.6e-105 385.2 297 81.1
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 7.3e-103 377.9 297 75.1
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 5.8e-92 341.7 302 68.9
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 2.9e-91 339.3 315 65.7
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 8.7e-88 327.8 170 99.4
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 4.8e-86 322.0 170 97.6
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 3.4e-84 315.8 167 97.0
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 7.6e-84 314.7 187 87.7
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-76 288.9 163 92.6
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-74 283.9 163 92.0
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 1.5e-60 237.3 284 59.2
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 2.9e-59 233.0 290 59.3
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 2.9e-59 233.0 275 58.5
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 3.8e-59 232.6 273 57.5
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 5.0e-59 232.3 273 57.1
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 7.2e-58 228.4 284 57.7
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 9.3e-58 228.0 294 59.5
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 6.7e-56 221.9 220 64.5
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.5e-55 220.7 223 61.0
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 9.7e-55 218.0 191 66.0
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 1.3e-54 217.6 191 66.0
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 4.8e-54 215.7 208 60.1
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 2.4e-53 213.4 174 68.4
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 3.6e-49 199.5 183 66.7
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 3.6e-49 199.5 255 57.6
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-48 197.6 279 53.8
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 8.8e-48 194.9 244 55.7
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.1e-47 194.5 244 55.3
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 7.4e-47 191.8 198 63.1
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 3.7e-46 189.5 93 97.8
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 1.4e-45 187.6 137 91.2
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 3.1e-45 186.4 183 61.7
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 6.9e-45 185.3 137 86.9
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-44 184.5 145 70.3
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-44 184.1 199 62.3
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 2.6e-44 183.3 220 57.7
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 5.0e-43 179.1 273 45.1
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-42 177.6 146 68.5
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 5.5e-42 175.6 139 68.3
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 7.2e-42 175.3 123 74.8
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 1.6e-41 174.1 193 58.5
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 2.3e-40 170.2 178 59.0
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 8.8e-40 168.3 192 58.3
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-39 167.5 123 73.2
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 3.3e-39 166.4 81 100.0
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 9.7e-39 164.9 146 64.4
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 6.3e-38 162.2 268 51.5
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 8.2e-38 161.8 264 50.0
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-37 161.0 133 68.4
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 1.6e-36 157.5 121 70.2
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 5.9e-36 155.6 99 92.9
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 5.9e-36 155.6 216 48.6
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 7.7e-36 155.2 247 44.1
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 5.0e-35 152.5 82 90.2
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 1.9e-34 150.6 105 88.6
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 3.2e-34 149.8 190 51.1
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 4.2e-34 149.4 196 43.9
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 1.2e-33 147.9 219 48.9
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 4.0e-32 142.9 217 58.1
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 4.4e-31 139.4 93 88.2
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 3.7e-30 136.3 203 57.6
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 1.8e-29 134.0 231 49.4
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-28 131.3 152 54.6
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 1.6e-28 131.0 166 58.4
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 3.5e-28 129.8 236 47.0
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 1.3e-27 127.9 186 58.6
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 2.2e-27 127.1 137 59.1
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 2.9e-27 126.7 66 89.4
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 5.0e-27 125.9 234 47.9
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 1.1e-26 124.8 165 67.3
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 1.9e-26 124.0 65 98.5
BcaC01g02783 Brassica carinata HOM05D004128 ORTHO05D008395 7.2e-26 122.1 105 81.0
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 1.6e-25 120.9 85 69.4
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 2.7e-25 120.2 110 55.5
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 4.7e-25 119.4 161 51.6
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 4.7e-25 119.4 161 51.6
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 5.2e-24 115.9 227 48.5
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 8.8e-24 115.2 64 82.8
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-23 114.4 105 61.9
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 1.5e-23 114.4 111 54.1
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-23 113.2 64 81.2
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 7.5e-23 112.1 55 94.5
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 2.8e-22 110.2 225 42.7
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 2.8e-22 110.2 150 46.7
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 1.4e-21 107.8 228 47.4
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 2.4e-21 107.1 137 47.4
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 3.1e-21 106.7 57 100.0
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 3.1e-21 106.7 57 100.0
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 4.1e-21 106.3 177 43.5
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 4.1e-21 106.3 138 47.1
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 3.5e-20 103.2 168 41.1
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 5.9e-20 102.4 55 83.6
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 1.7e-19 100.9 64 82.8
BraA05t21895Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-18 97.4 55 80.0
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 3.2e-18 96.7 214 34.1
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 5.5e-18 95.9 220 44.1
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 2.1e-17 94.0 180 45.0
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 4.7e-17 92.8 233 43.3
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 6.1e-17 92.4 146 47.3
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 1.4e-16 91.3 133 48.9
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 4.0e-16 89.7 126 40.5
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 8.8e-16 88.6 122 44.3
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 8.8e-16 88.6 122 44.3
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 1.2e-15 88.2 121 44.6
BcaC02g09038 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-15 87.4 83 78.3
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 7.5e-15 85.5 58 82.8
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 7.5e-15 85.5 121 44.6
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-14 84.7 44 93.2
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-14 84.7 44 93.2
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 2.2e-14 84.0 48 81.2
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 3.7e-14 83.2 72 54.2
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 4.9e-14 82.8 212 43.4
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 1.1e-13 81.6 160 36.2
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-13 81.6 85 52.9
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-13 81.3 85 51.8
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-13 80.9 85 51.8
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 3.1e-13 80.1 85 51.8
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 5.4e-13 79.3 216 31.0
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-12 78.2 177 36.2
BolC3t17977H Brassica oleracea HOM05D007203 ORTHO05D011558 1.6e-12 77.8 74 86.5
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 2.0e-12 77.4 126 37.3
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 2.7e-12 77.0 175 51.4
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 3.5e-12 76.6 216 31.5
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 5.9e-12 75.9 192 50.0
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 1.7e-11 74.3 157 35.7
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 2.3e-11 73.9 135 36.3
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 2.3e-11 73.9 93 47.3
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.9e-11 73.6 115 39.1
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 3.8e-11 73.2 175 33.1
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 1.1e-10 71.6 85 52.9
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 1.1e-10 71.6 85 52.9
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 1.1e-10 71.6 167 51.5
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 1.5e-10 71.2 78 57.7
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 1.5e-10 71.2 98 37.8
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 5.6e-10 69.3 83 59.0
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 5.6e-10 69.3 127 44.1
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 1.6e-09 67.8 68 57.4
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 1.6e-09 67.8 99 54.5
BcaC05g27919 Brassica carinata HOM05D007203 ORTHO05D039141 2.8e-09 67.0 157 48.4
C06p20830 Brassica napus HOM05D007203 ORTHO05D041891 3.6e-09 66.6 159 48.4
BolC6t37269H Brassica oleracea HOM05D007203 ORTHO05D041891 3.6e-09 66.6 159 48.4
BcaB01g01280 Brassica carinata HOM05D003554 ORTHO05D005130 4.7e-09 66.2 158 32.3
Sp6g02630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 6.1e-09 65.9 125 36.8
BolC5t32922H Brassica oleracea HOM05D004128 ORTHO05D033837 8.0e-09 65.5 70 58.6
BcaC01g00876 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-08 65.1 38 78.9
C03p76590 Brassica napus HOM05D008062 ORTHO05D011707 1.4e-08 64.7 110 39.1
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 1.4e-08 64.7 78 42.3
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 2.3e-08 63.9 163 46.0
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 2.3e-08 63.9 135 32.6
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-08 63.9 55 50.9
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 4.0e-08 63.2 178 47.2
BolC6t37270H Brassica oleracea HOM05D004128 ORTHO05D008395 4.0e-08 63.2 39 76.9
BraA05t20613Z Brassica rapa HOM05D008062 ORTHO05D008395 5.2e-08 62.8 110 38.2
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 2.6e-07 60.5 87 50.6
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 3.4e-07 60.1 113 48.7
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 4.4e-07 59.7 57 49.1
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 5.7e-07 59.3 64 59.4
BcaC03g16254 Brassica carinata HOM05D003554 ORTHO05D005130 9.8e-07 58.5 164 31.1
C09p61810 Brassica napus HOM05D007203 ORTHO05D041948 9.8e-07 58.5 155 43.2
BolC9t59019H Brassica oleracea HOM05D007203 ORTHO05D041948 9.8e-07 58.5 155 43.2
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 1.3e-06 58.2 85 51.8
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 1.7e-06 57.8 55 61.8
BcaB05g25144 Brassica carinata HOM05D008316 ORTHO05D005130 2.2e-06 57.4 83 42.2
BcaC09g49342 Brassica carinata HOM05D008316 ORTHO05D005130 2.2e-06 57.4 83 42.2
BcaB04g17410 Brassica carinata HOM05D003554 ORTHO05D005130 2.9e-06 57.0 185 29.2
BcaB04g17553 Brassica carinata HOM05D008316 ORTHO05D014956 2.9e-06 57.0 76 44.7
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 2.9e-06 57.0 120 32.5
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 2.9e-06 57.0 36 86.1
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 2.9e-06 57.0 49 67.3
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 3.7e-06 56.6 87 55.2
C09p28930 Brassica napus HOM05D007203 ORTHO05D008395 3.7e-06 56.6 94 41.5
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 8.3e-06 55.5 80 40.0
Sp3g27700 Schrenkiella parvula HOM05D004128 ORTHO05D008395 8.3e-06 55.5 56 46.4
SpUn0012_0140 Schrenkiella parvula HOM05D000286 ORTHO05D008395 8.3e-06 55.5 56 44.6
SpUn0048_0020 Schrenkiella parvula HOM05D041219 ORTHO05D008395 8.3e-06 55.5 56 44.6


User provided reference genes

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