Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 1.3e-159 566.2 273 100.0
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 3.3e-158 561.6 273 98.5
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 9.0e-156 553.5 273 97.8
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 9.0e-156 553.5 273 97.4
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 1.5e-150 536.2 273 93.8
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 1.1e-145 520.0 270 91.9
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 7.1e-145 517.3 273 88.6
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 1.6e-144 516.2 273 89.0
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 6.2e-141 504.2 274 87.6
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 6.9e-140 500.7 256 96.1
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 3.8e-138 495.0 274 85.4
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 1.8e-132 476.1 256 91.0
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 9.0e-132 473.8 273 82.1
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 1.9e-129 466.1 273 79.1
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 1.1e-116 423.7 273 72.2
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 5.9e-115 417.9 273 71.8
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 2.2e-114 416.0 273 71.8
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 3.2e-113 412.1 273 70.0
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 3.6e-112 408.7 248 73.4
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 3.6e-112 408.7 248 73.4
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 7.9e-112 407.5 248 73.4
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 1.4e-111 406.8 273 69.6
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 3.9e-111 405.2 248 74.2
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 1.5e-110 403.3 273 68.9
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 2.6e-110 402.5 268 69.4
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 9.7e-110 400.6 245 72.7
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 1.3e-109 400.2 266 69.2
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 2.2e-109 399.4 272 68.4
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 4.8e-109 398.3 273 67.4
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 1.1e-108 397.1 270 67.4
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 1.4e-108 396.7 273 66.7
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.5e-107 393.3 267 69.3
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 1.5e-107 393.3 261 69.0
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 1.5e-107 393.3 264 69.3
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 2.0e-107 392.9 262 69.8
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 2.6e-107 392.5 248 69.4
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 3.5e-107 392.1 264 69.7
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 5.9e-107 391.3 270 66.7
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 5.9e-107 391.3 248 69.0
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 5.9e-107 391.3 248 69.0
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 2.2e-106 389.4 274 65.3
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 2.2e-106 389.4 250 70.8
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 2.2e-106 389.4 248 71.8
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 6.5e-106 387.9 269 67.7
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 1.1e-105 387.1 252 71.0
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 5.5e-105 384.8 256 68.4
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 9.4e-105 384.0 256 68.4
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 2.1e-104 382.9 266 65.8
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 1.0e-103 380.6 253 68.4
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 1.0e-103 380.6 256 68.4
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.4e-103 380.2 267 68.2
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 1.4e-103 380.2 248 69.8
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 1.4e-103 380.2 248 70.2
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 1.8e-103 379.8 265 66.0
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 3.0e-103 379.0 264 68.6
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 6.7e-103 377.9 250 68.4
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 8.8e-103 377.5 256 67.2
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 9.7e-102 374.0 256 66.8
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 1.3e-101 373.6 270 64.1
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 2.2e-101 372.9 270 64.1
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 4.8e-101 371.7 266 65.8
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 1.4e-100 370.2 270 63.7
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 1.8e-100 369.8 273 61.9
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 9.1e-100 367.5 272 62.9
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 1.0e-98 364.0 274 62.8
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 2.2e-98 362.8 248 65.3
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 3.8e-98 362.1 285 61.1
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 6.5e-98 361.3 253 64.0
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 4.2e-97 358.6 291 59.1
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 5.5e-97 358.2 252 67.5
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 4.0e-95 352.1 251 64.1
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 4.4e-94 348.6 244 67.6
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.2e-93 346.3 254 62.6
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 3.5e-91 339.0 246 64.2
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 1.3e-90 337.0 253 59.7
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 5.5e-89 331.6 222 67.1
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 3.4e-86 322.4 241 63.9
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 5.7e-86 321.6 242 63.2
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 4.1e-84 315.5 291 55.7
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 1.6e-83 313.5 236 59.7
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 2.9e-82 309.3 234 61.5
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 7.2e-81 304.7 235 60.4
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 6.8e-79 298.1 235 58.3
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 2.6e-78 296.2 203 66.0
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 2.0e-75 286.6 237 55.3
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 2.9e-74 282.7 175 72.0
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 9.5e-73 277.7 192 65.1
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 4.7e-72 275.4 250 56.0
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 9.8e-70 267.7 234 49.6
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 1.9e-68 263.5 236 47.9
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 5.4e-68 261.9 183 64.5
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 5.6e-65 251.9 185 66.5
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 6.8e-63 245.0 163 71.2
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 1.6e-56 223.8 136 70.6
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 7.1e-52 208.4 144 66.7
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 9.6e-49 198.0 160 55.0
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 1.4e-47 194.1 170 52.9
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 3.1e-47 193.0 164 57.9
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 4.4e-46 189.1 129 61.2
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.3e-45 187.6 131 67.9
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.3e-45 187.6 131 67.9
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.4e-44 183.3 136 63.2
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 2.1e-43 180.3 111 73.0
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 1.4e-36 157.5 144 54.9
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 1.5e-33 147.5 236 34.3
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 1.1e-31 141.4 103 62.1
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 1.0e-26 124.8 261 36.4
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 1.9e-25 120.6 111 54.1
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 2.8e-24 116.7 154 42.9
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 3.7e-24 116.3 95 57.9
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 1.5e-22 110.9 62 80.6
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 1.8e-18 97.4 68 69.1
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 5.7e-17 92.4 59 74.6
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 9.6e-17 91.7 53 81.1
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.4e-15 87.0 73 61.6
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.0e-14 84.0 44 81.8
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.0e-14 84.0 44 81.8
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 3.2e-12 76.6 38 89.5
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 7.1e-12 75.5 59 57.6
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 3.5e-11 73.2 146 28.1
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 7.4e-09 65.5 41 73.2
MCO13G376 Micromonas commoda HOM05D006283 ORTHO05D007727 8.2e-08 62.0 162 27.8
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.8e-07 60.8 86 44.2
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.4e-07 60.5 38 68.4
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.4e-07 60.5 38 68.4
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 3.1e-07 60.1 74 44.6


User provided reference genes

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