Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t37652H Brassica oleracea HOM05D042305 ORTHO05D041809 3.6e-28 127.5 62 100.0
C06p25000 Brassica napus HOM05D042305 ORTHO05D041809 2.6e-26 121.3 59 100.0
Thhalv10001680m.g Eutrema salsugineum HOM05D000220 ORTHO05D000141 1.9e-16 88.6 64 76.6
BcaB01g03284 Brassica carinata HOM05D000220 ORTHO05D000141 3.5e-15 84.3 61 77.0
Sp4g27230 Schrenkiella parvula HOM05D000220 ORTHO05D000141 3.9e-14 80.9 63 73.0
SpUn0031_0090 Schrenkiella parvula HOM05D000220 ORTHO05D000141 3.9e-14 80.9 63 73.0
AL4G44300 Arabidopsis lyrata HOM05D000220 ORTHO05D000141 6.6e-14 80.1 64 70.3
Carub.0004s2780 Capsella rubella HOM05D000220 ORTHO05D000141 6.6e-14 80.1 64 70.3
AT2G45180 Arabidopsis thaliana HOM05D000220 ORTHO05D000141 1.9e-13 78.6 64 70.3
A03p25080 Brassica napus HOM05D042305 ORTHO05D000141 2.5e-13 78.2 61 72.1
BraA03t11710Z Brassica rapa HOM05D000220 ORTHO05D000141 2.5e-13 78.2 61 72.1
CARHR140400 Cardamine hirsuta HOM05D000220 ORTHO05D000141 5.2e-11 70.5 61 67.2
BcaC01g05152 Brassica carinata HOM05D000220 ORTHO05D000141 2.4e-08 61.6 61 62.3
C03p29920 Brassica napus HOM05D000220 ORTHO05D000141 2.4e-08 61.6 61 62.3
BolC3t15339H Brassica oleracea HOM05D000220 ORTHO05D000141 2.4e-08 61.6 61 62.3
Thecc.03G254800 Theobroma cacao HOM05D000220 ORTHO05D000141 7.1e-08 60.1 64 60.9
Ciclev10022832m.g Citrus clementina HOM05D000220 ORTHO05D000141 3.5e-07 57.8 60 58.3
Actinidia02115 Actinidia chinensis HOM05D000220 ORTHO05D000141 3.0e-06 54.7 58 55.2
HanXRQChr06g0164301 Helianthus annuus HOM05D000220 ORTHO05D000141 3.0e-06 54.7 69 50.7
Prupe.5G072800 Prunus persica HOM05D000220 ORTHO05D000141 3.0e-06 54.7 72 50.0
Eucgr.D02488 Eucalyptus grandis HOM05D000220 ORTHO05D000141 5.1e-06 53.9 63 55.6
THA.LOC104817224 Tarenaya hassleriana HOM05D000220 ORTHO05D000141 6.6e-06 53.5 65 53.8
CANSAT56G4529 Cannabis sativa HOM05D000220 ORTHO05D000141 8.6e-06 53.1 64 48.4
CiPaw.11G152100 Carya illinoinensis HOM05D000220 ORTHO05D000141 8.6e-06 53.1 58 55.2
COL.COLO4_12501 Corchorus olitorius HOM05D000220 ORTHO05D000141 8.6e-06 53.1 70 48.6


User provided reference genes

Program Settings