Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 7.0e-187 657.1 332 100.0
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 1.8e-179 632.5 332 97.3
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 3.0e-174 615.1 332 95.2
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 6.6e-169 597.4 336 91.7
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 6.6e-169 597.4 336 91.7
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 3.5e-146 521.9 332 82.8
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 8.7e-137 490.7 335 79.1
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 8.7e-129 464.2 334 74.9
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 8.7e-129 464.2 334 74.6
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 8.7e-129 464.2 334 74.9
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 8.7e-129 464.2 334 74.6
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 1.5e-128 463.4 334 74.9
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 3.8e-124 448.7 335 73.4
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 4.9e-124 448.4 342 72.2
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 5.5e-123 444.9 335 72.8
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 2.1e-119 433.0 338 71.9
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 5.8e-117 424.9 340 70.9
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 1.8e-113 413.3 337 69.1
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 3.7e-111 405.6 342 70.8
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 4.8e-111 405.2 335 69.6
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 1.4e-102 377.1 348 66.7
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 1.2e-98 364.0 341 64.8
BcaC02g09872 Brassica carinata HOM05D009749 ORTHO05D008033 1.8e-86 323.6 261 69.0
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 4.0e-57 226.1 186 69.9
Thhalv10006450m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 9.5e-51 204.9 145 79.3
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 1.2e-50 204.5 323 48.3
Aa31LG10G11650 Aethionema arabicum HOM05D009749 ORTHO05D008033 2.6e-40 170.2 145 66.9
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 1.7e-15 87.8 379 27.4
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 3.8e-15 86.7 345 30.1
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 7.1e-14 82.4 375 26.4
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.0e-12 78.6 249 29.3
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 3.0e-12 77.0 377 27.9
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 1.1e-11 75.1 237 27.8
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.5e-11 74.7 197 32.0
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 2.5e-11 73.9 368 27.2
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 2.5e-11 73.9 283 26.9
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 3.3e-11 73.6 375 25.9
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 3.3e-11 73.6 234 28.2
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 4.3e-11 73.2 361 26.6
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 7.4e-11 72.4 369 27.1
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 7.4e-11 72.4 381 25.5
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 2.1e-10 70.9 260 27.3
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 2.8e-10 70.5 195 31.3
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 2.8e-10 70.5 241 28.6
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 2.8e-10 70.5 359 24.5
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 2.8e-10 70.5 383 26.6
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 3.7e-10 70.1 199 31.7
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 8.1e-10 68.9 389 25.2
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.1e-09 68.6 237 25.7
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 1.8e-09 67.8 239 28.0
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 2.4e-09 67.4 284 25.4
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 4.0e-09 66.6 248 24.6
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 4.0e-09 66.6 256 27.0
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 5.3e-09 66.2 258 29.5
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 5.3e-09 66.2 97 37.1
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 6.9e-09 65.9 390 24.4
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.2e-08 65.1 194 28.9
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 1.2e-08 65.1 251 24.7
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 2.0e-08 64.3 318 25.5
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 3.4e-08 63.5 334 26.0
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 5.8e-08 62.8 147 31.3
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 7.6e-08 62.4 255 25.9
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 9.9e-08 62.0 272 26.5
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 1.7e-07 61.2 46 56.5
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 2.2e-07 60.8 106 35.8
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 3.8e-07 60.1 227 26.9
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 3.8e-07 60.1 232 27.2
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 8.4e-07 58.9 253 24.9
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.1e-06 58.5 226 25.2
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 1.4e-06 58.2 241 25.3
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 9.3e-06 55.5 212 25.9
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 9.3e-06 55.5 310 25.5


User provided reference genes

Program Settings