Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t37531H Brassica oleracea HOM05D000625 ORTHO05D000467 9.0e-44 179.9 91 100.0
BcaC08g44790 Brassica carinata HOM05D000625 ORTHO05D000467 4.2e-41 171.0 91 95.6
BraA06t24866Z Brassica rapa HOM05D000625 ORTHO05D000467 1.7e-26 122.5 92 81.5
BcaC05g26084 Brassica carinata HOM05D000625 ORTHO05D000467 3.9e-23 111.3 98 68.4
C05p20630 Brassica napus HOM05D000625 ORTHO05D000467 1.9e-22 109.0 62 90.3
BolC5t30762H Brassica oleracea HOM05D000625 ORTHO05D000467 3.3e-22 108.2 95 68.4
Sp1g19200 Schrenkiella parvula HOM05D000625 ORTHO05D000467 5.7e-22 107.5 97 68.0
Thhalv10007304m.g Eutrema salsugineum HOM05D000625 ORTHO05D000467 1.0e-18 96.7 113 58.4
Aa31LG7G5640 Aethionema arabicum HOM05D000625 ORTHO05D000467 8.5e-18 93.6 108 51.9
A06p17740 Brassica napus HOM05D000625 ORTHO05D000467 2.5e-17 92.0 92 64.1
BcaB07g32160 Brassica carinata HOM05D000625 ORTHO05D000467 2.7e-16 88.6 95 56.8
Carub.0001s2109 Capsella rubella HOM05D000625 ORTHO05D000467 2.3e-15 85.5 105 52.4
THA.LOC104810253 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 6.7e-15 84.0 108 48.1
BraA07t29243Z Brassica rapa HOM05D000625 ORTHO05D000467 1.5e-14 82.8 93 61.3
THA.LOC104813676 Tarenaya hassleriana HOM05D000625 ORTHO05D000467 1.5e-14 82.8 107 48.6
FAN20G2499 Fragaria x ananassa HOM05D000625 ORTHO05D000467 1.1e-12 76.6 91 54.9
AL1G34820 Arabidopsis lyrata HOM05D000625 ORTHO05D000467 1.4e-12 76.3 105 52.4
RcHm_v2.0_Chr6g0296551 Rosa chinensis HOM05D000625 ORTHO05D000467 1.4e-12 76.3 93 53.8
BcaC06g34899 Brassica carinata HOM05D000625 ORTHO05D000467 2.0e-11 72.4 97 49.5
BolC7t42732H Brassica oleracea HOM05D000625 ORTHO05D000467 2.0e-11 72.4 97 49.5
AT1G21660 Arabidopsis thaliana HOM05D000625 ORTHO05D000467 4.5e-11 71.2 106 48.1
FAN24G3040 Fragaria x ananassa HOM05D000625 ORTHO05D000467 5.9e-11 70.9 95 49.5
Sabra02G0062000 Salix brachista HOM05D000625 ORTHO05D000467 5.9e-11 70.9 92 50.0
FAN15G1967 Fragaria x ananassa HOM05D000625 ORTHO05D000467 7.7e-11 70.5 94 45.7
TWI32G0027 Tripterygium wilfordii HOM05D000625 ORTHO05D000467 7.7e-11 70.5 101 44.6
CARHR022010 Cardamine hirsuta HOM05D000625 ORTHO05D000467 1.7e-10 69.3 78 59.0
A07p14970 Brassica napus HOM05D000625 ORTHO05D000467 2.2e-10 68.9 111 45.0
FvH4_2g27690 Fragaria vesca HOM05D000625 ORTHO05D000467 2.9e-10 68.6 99 47.5
Potri.002G079200 Populus trichocarpa HOM05D000625 ORTHO05D000467 2.9e-10 68.6 95 48.4
Potri.005G181700 Populus trichocarpa HOM05D000625 ORTHO05D000467 8.5e-10 67.0 95 46.3
C07p22020 Brassica napus HOM05D000625 ORTHO05D000467 1.1e-09 66.6 97 47.4
Prupe.1G490900 Prunus persica HOM05D000625 ORTHO05D000467 1.2e-08 63.2 99 46.5
Atru.chr13.1547 Acer truncatum HOM05D000625 ORTHO05D000467 1.6e-08 62.8 101 49.5
CANSAT25G1572 Cannabis sativa HOM05D000625 ORTHO05D000467 1.6e-08 62.8 88 47.7
Sabra05G0137700 Salix brachista HOM05D000625 ORTHO05D000467 1.6e-08 62.8 93 43.0
COL.COLO4_06774 Corchorus olitorius HOM05D000625 ORTHO05D000467 3.6e-08 61.6 87 43.7
FAN27G0862 Fragaria x ananassa HOM05D000625 ORTHO05D000467 4.7e-08 61.2 83 48.2
Ca_16601_v3 Cicer arietinum L. HOM05D000625 ORTHO05D000467 3.0e-07 58.5 101 46.5
BcaB03g14258 Brassica carinata HOM05D000625 ORTHO05D000467 3.9e-07 58.2 76 55.3
Cpa.g.sc64.141 Carica papaya HOM05D000625 ORTHO05D000467 3.9e-07 58.2 99 44.4
Cfa018113 Carpinus fangiana HOM05D000625 ORTHO05D000467 3.9e-07 58.2 93 45.2
Haze_18002 Corylus avellana HOM05D000625 ORTHO05D000467 3.9e-07 58.2 93 45.2
Lalb_Chr23g0271151 Lupinus albus HOM05D000625 ORTHO05D000467 5.1e-07 57.8 89 47.2
Medtr3g088495 Medicago truncatula HOM05D000625 ORTHO05D000467 1.1e-06 56.6 109 40.4
Psat5g080760 Pisum sativum HOM05D000625 ORTHO05D030191 2.0e-06 55.8 100 43.0
ClCG08G005970 Citrullus lanatus HOM05D000625 ORTHO05D000467 2.6e-06 55.5 109 40.4
arahy.Tifrunner.gnm1.ann1.K3K33Q Arachis hypogaea HOM05D000625 ORTHO05D000467 3.3e-06 55.1 102 44.1
Lj1g0006269 Lotus japonicus HOM05D000625 ORTHO05D000467 3.3e-06 55.1 89 44.9
Thecc.08G131800 Theobroma cacao HOM05D000625 ORTHO05D000467 3.3e-06 55.1 87 42.5
Eucgr.E01009 Eucalyptus grandis HOM05D000625 ORTHO05D000467 4.4e-06 54.7 27 92.6
Sed0023790 Sechium edule HOM05D000625 ORTHO05D000467 4.4e-06 54.7 90 45.6
arahy.Tifrunner.gnm1.ann1.W1K5LL Arachis hypogaea HOM05D000625 ORTHO05D000467 7.4e-06 53.9 102 41.2
MD00G1063400 Malus domestica HOM05D000625 ORTHO05D000467 9.7e-06 53.5 92 44.6


User provided reference genes

Program Settings