Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t37488H Brassica oleracea HOM05D002776 ORTHO05D104934 6.1e-51 203.8 96 100.0
BraA07t28346Z Brassica rapa HOM05D002776 ORTHO05D000395 6.1e-35 150.6 129 63.6
C01p44940 Brassica napus HOM05D002776 ORTHO05D003044 3.7e-32 141.4 94 77.7
BolC4t25127H Brassica oleracea HOM05D002776 ORTHO05D003044 4.9e-24 114.4 64 89.1
BolC3t19482H Brassica oleracea HOM05D002776 ORTHO05D106029 6.6e-21 104.0 57 93.0
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 1.8e-18 95.9 87 64.4
C05p44740 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-17 93.2 47 93.6
BolC7t45415H Brassica oleracea HOM05D002776 ORTHO05D028158 4.4e-17 91.3 42 92.9
BraA08t32834Z Brassica rapa HOM05D002776 ORTHO05D028158 1.7e-16 89.4 42 90.5
C04p41840 Brassica napus HOM05D002776 ORTHO05D003044 1.9e-15 85.9 39 92.3
BolC3t17909H Brassica oleracea HOM05D002776 ORTHO05D003044 1.9e-15 85.9 42 88.1
C03p56210 Brassica napus HOM05D002776 ORTHO05D003044 3.2e-15 85.1 42 88.1
C09p16550 Brassica napus HOM05D002776 ORTHO05D003044 3.2e-15 85.1 80 61.2
C03p75860 Brassica napus HOM05D002776 ORTHO05D003044 2.5e-12 75.5 62 69.4
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 5.6e-12 74.3 50 82.0
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 5.6e-12 74.3 57 68.4
A07p02050 Brassica napus HOM05D002776 ORTHO05D003044 7.3e-12 73.9 62 64.5
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 7.3e-12 73.9 62 66.1
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 2.1e-11 72.4 55 65.5
C08p06670 Brassica napus HOM05D002776 ORTHO05D003044 2.8e-11 72.0 62 62.9
BolC9t55017H Brassica oleracea HOM05D002776 ORTHO05D003044 2.8e-11 72.0 62 62.9
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 1.4e-10 69.7 51 70.6
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 3.1e-10 68.6 55 60.0
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-09 66.6 59 61.0
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 2.0e-09 65.9 59 61.0
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 3.4e-09 65.1 41 75.6
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 2.2e-08 62.4 85 48.2
A09p33400 Brassica napus HOM05D002776 ORTHO05D003044 2.9e-08 62.0 47 68.1
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 2.9e-08 62.0 42 73.8
BraA01t01978Z Brassica rapa HOM05D002776 ORTHO05D003044 2.9e-08 62.0 42 73.8
BraA09t38883Z Brassica rapa HOM05D002776 ORTHO05D003044 2.9e-08 62.0 47 68.1
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 2.9e-08 62.0 42 73.8
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 4.9e-08 61.2 47 68.1
BolC6t36241H Brassica oleracea HOM05D002776 ORTHO05D003044 4.9e-08 61.2 81 46.9
BcaB07g33314 Brassica carinata HOM05D002776 ORTHO05D003044 6.4e-08 60.8 35 80.0
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 6.4e-08 60.8 29 96.6
A08p08130 Brassica napus HOM05D002776 ORTHO05D003044 6.4e-08 60.8 85 47.1
BcaB04g17677 Brassica carinata HOM05D002776 ORTHO05D003044 8.4e-08 60.5 47 63.8
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 1.1e-07 60.1 36 75.0
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 1.4e-07 59.7 47 63.8
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-07 59.7 47 66.0
A08p09940 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-07 59.7 42 69.0
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 1.4e-07 59.7 59 55.9
BraA03t15647Z Brassica rapa HOM05D002776 ORTHO05D003044 1.4e-07 59.7 47 66.0
A01p20500 Brassica napus HOM05D002776 ORTHO05D003044 1.9e-07 59.3 28 96.4
A03p54420 Brassica napus HOM05D002776 ORTHO05D003044 1.9e-07 59.3 29 93.1
BcaB06g27028 Brassica carinata HOM05D002776 ORTHO05D003044 2.4e-07 58.9 30 86.7
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 2.4e-07 58.9 29 93.1
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 3.2e-07 58.5 47 61.7
C07p01230 Brassica napus HOM05D002776 ORTHO05D003044 4.2e-07 58.2 47 63.8
BcaB05g23549 Brassica carinata HOM05D002776 ORTHO05D091522 1.2e-06 56.6 45 64.4
C09p28490 Brassica napus HOM05D002776 ORTHO05D103251 2.1e-06 55.8 37 59.5
BcaB04g17428 Brassica carinata HOM05D002776 ORTHO05D091936 4.6e-06 54.7 44 59.1
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 6.0e-06 54.3 44 63.6


User provided reference genes

Program Settings