Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 2.3e-160 568.9 299 100.0
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 2.3e-160 568.9 299 100.0
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 1.0e-152 543.5 299 94.3
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 1.0e-152 543.5 299 94.3
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 2.0e-148 529.3 302 91.7
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 1.5e-143 513.1 299 90.6
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 1.1e-141 506.9 302 86.8
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 3.1e-141 505.4 303 86.1
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 5.2e-141 504.6 302 86.4
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 2.6e-140 502.3 303 87.5
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 3.4e-140 501.9 303 84.8
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 7.5e-140 500.7 298 85.9
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 1.7e-139 499.6 298 85.6
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 3.2e-138 495.4 302 85.1
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 4.1e-138 495.0 302 85.1
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 1.5e-135 486.5 292 86.3
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 7.3e-135 484.2 302 84.1
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 7.8e-129 464.2 293 81.2
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 2.1e-118 429.5 300 74.0
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 7.6e-116 421.0 298 71.8
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 1.3e-112 410.2 301 70.8
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 1.9e-111 406.4 302 70.2
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 3.3e-111 405.6 297 70.0
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 2.1e-110 402.9 298 68.5
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 2.1e-110 402.9 298 68.5
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 2.1e-110 402.9 298 68.5
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 4.8e-110 401.7 299 67.9
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 6.2e-110 401.4 293 69.3
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 1.8e-109 399.8 290 68.3
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 3.4e-108 395.6 304 67.8
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 4.5e-108 395.2 290 67.6
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 1.3e-107 393.7 298 66.4
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 1.7e-107 393.3 293 67.9
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 1.7e-107 393.3 298 66.8
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 1.7e-107 393.3 294 68.0
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 3.8e-107 392.1 300 66.0
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 8.4e-107 391.0 293 67.2
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 1.9e-106 389.8 293 68.6
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 2.4e-106 389.4 301 67.8
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 2.4e-106 389.4 292 68.2
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 3.2e-106 389.0 294 68.0
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 5.5e-106 388.3 291 66.7
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 7.1e-106 387.9 300 67.0
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 1.2e-105 387.1 293 67.2
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 1.2e-105 387.1 299 67.6
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 1.2e-105 387.1 294 67.7
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 1.6e-105 386.7 300 65.0
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 1.6e-105 386.7 298 66.8
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 2.7e-105 386.0 296 67.2
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 2.7e-105 386.0 290 65.9
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 2.7e-105 386.0 296 65.9
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 3.5e-105 385.6 292 67.5
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 4.6e-105 385.2 299 66.9
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 6.0e-105 384.8 297 66.3
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 7.9e-105 384.4 300 65.7
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 7.9e-105 384.4 297 64.6
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 7.9e-105 384.4 293 67.9
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 1.8e-104 383.3 300 66.7
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 3.0e-104 382.5 293 67.2
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 6.7e-104 381.3 293 66.2
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 1.5e-103 380.2 292 65.4
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 1.5e-103 380.2 323 63.8
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 2.5e-103 379.4 299 65.6
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 3.3e-103 379.0 293 65.5
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 4.3e-103 378.6 299 64.5
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 7.4e-103 377.9 298 65.4
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 9.6e-103 377.5 296 66.2
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 1.6e-102 376.7 306 63.7
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 8.2e-102 374.4 295 67.1
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 1.1e-101 374.0 282 68.8
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 2.4e-101 372.9 292 64.4
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 3.1e-101 372.5 298 64.4
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 5.3e-101 371.7 293 63.5
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 5.3e-101 371.7 299 63.2
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 6.9e-101 371.3 294 63.9
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 2.0e-100 369.8 296 63.9
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 2.2e-99 366.3 305 62.0
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 1.1e-98 364.0 374 54.8
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 7.1e-98 361.3 295 62.7
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 4.6e-97 358.6 286 64.0
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 1.0e-96 357.5 290 61.4
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 1.3e-96 357.1 278 65.1
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 3.3e-95 352.4 275 65.1
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 7.4e-95 351.3 302 59.6
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 2.2e-94 349.7 277 63.2
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 2.2e-94 349.7 278 66.9
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 3.7e-94 349.0 289 60.9
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 1.8e-93 346.7 288 60.4
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 1.2e-92 344.0 310 58.7
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 7.7e-92 341.3 251 68.5
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 1.0e-91 340.9 289 62.3
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.3e-91 340.5 277 62.1
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 1.3e-91 340.5 303 60.1
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 4.2e-90 335.5 290 59.7
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.2e-89 334.0 277 62.8
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 1.2e-89 334.0 242 68.6
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 3.6e-89 332.4 295 61.0
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 3.9e-88 328.9 287 61.0
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 5.1e-88 328.6 298 60.1
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 5.9e-84 315.1 289 55.4
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 3.8e-83 312.4 291 56.0
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 6.5e-83 311.6 275 60.0
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 6.5e-83 311.6 275 60.0
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.1e-82 310.8 275 60.0
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.4e-82 310.5 275 60.0
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.6e-81 307.0 264 59.1
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.1e-81 306.6 275 59.3
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 2.3e-80 303.1 289 54.7
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 8.8e-80 301.2 296 52.7
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 4.1e-77 292.4 289 53.3
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 3.5e-76 289.3 319 48.3
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 2.1e-65 253.4 289 46.7
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 8.0e-65 251.5 282 51.8
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 1.5e-55 220.7 147 72.1
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 2.8e-54 216.5 256 48.8
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 1.7e-51 207.2 149 65.8
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.5e-50 204.1 150 64.7
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 1.4e-48 197.6 147 65.3
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 3.0e-48 196.4 159 66.7
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 1.8e-45 187.2 355 35.2
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 4.1e-45 186.0 138 68.8
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.6e-44 184.1 147 62.6
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.4e-40 171.0 122 72.1
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 1.6e-36 157.5 122 67.2
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.1e-34 151.4 115 64.3
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 3.5e-28 129.8 102 62.7
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 3.4e-23 113.2 79 68.4
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 2.3e-19 100.5 73 67.1
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 2.9e-14 83.6 147 36.7
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 7.8e-12 75.5 67 62.7
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 7.3e-10 68.9 53 66.0


User provided reference genes

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