Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p20830 Brassica napus HOM05D007203 ORTHO05D041891 2.6e-106 389.4 320 100.0
BolC6t37269H Brassica oleracea HOM05D007203 ORTHO05D041891 2.6e-106 389.4 320 100.0
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 1.1e-56 224.6 362 68.8
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 2.3e-54 216.9 360 65.0
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 6.3e-52 208.8 475 54.5
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 6.3e-52 208.8 475 54.5
BcaC05g27919 Brassica carinata HOM05D007203 ORTHO05D039141 2.7e-50 203.4 485 51.3
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 2.5e-48 196.8 370 62.7
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 2.3e-46 190.3 367 63.8
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 4.0e-46 189.5 525 49.1
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 6.8e-46 188.7 534 48.5
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 6.8e-46 188.7 525 49.1
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 7.5e-45 185.3 429 52.9
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-44 184.5 345 56.8
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 3.5e-42 176.4 540 47.4
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 3.4e-37 159.8 279 71.0
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 7.8e-34 148.7 158 81.6
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 2.3e-33 147.1 285 68.8
C09p61810 Brassica napus HOM05D007203 ORTHO05D041948 5.6e-32 142.5 270 77.4
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-31 140.6 158 72.2
BolC9t59019H Brassica oleracea HOM05D007203 ORTHO05D041948 4.4e-29 132.9 270 74.1
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 1.1e-27 128.3 320 35.3
BcaB03g16432 Brassica carinata HOM05D007203 ORTHO05D011558 5.4e-27 125.9 306 37.9
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 1.2e-26 124.8 370 37.6
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 1.3e-25 121.3 398 40.2
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 1.6e-23 114.4 358 39.4
BcaC04g20468 Brassica carinata HOM05D007203 ORTHO05D094473 8.1e-23 112.1 141 75.2
BolC2t09431H Brassica oleracea HOM05D007203 ORTHO05D027708 5.2e-22 109.4 142 50.7
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 4.4e-21 106.3 326 43.9
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 2.2e-20 104.0 172 71.5
BcaB01g01435 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-19 101.3 382 35.6
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 2.1e-18 97.4 314 43.6
BolC3t17977H Brassica oleracea HOM05D007203 ORTHO05D011558 3.5e-18 96.7 202 40.1
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 4.6e-18 96.3 144 70.1
C09p28930 Brassica napus HOM05D007203 ORTHO05D008395 1.0e-17 95.1 73 72.6
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 6.6e-17 92.4 373 39.4
BolC5t32660H Brassica oleracea HOM05D007203 ORTHO05D011558 6.6e-17 92.4 50 90.0
C01p16070 Brassica napus HOM05D007203 ORTHO05D011558 2.5e-16 90.5 212 36.8
C03p35500 Brassica napus HOM05D007203 ORTHO05D011558 7.3e-16 89.0 50 88.0
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 1.2e-15 88.2 224 35.7
C03p33440 Brassica napus HOM05D007203 ORTHO05D027708 1.2e-15 88.2 90 60.0
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 1.2e-15 88.2 444 35.1
C08p21920 Brassica napus HOM05D007203 ORTHO05D011558 1.2e-15 88.2 50 88.0
A08p11280 Brassica napus HOM05D007203 ORTHO05D042169 1.6e-15 87.8 244 59.4
BraA08t33124Z Brassica rapa HOM05D007203 ORTHO05D042169 1.6e-15 87.8 244 59.4
BcaB04g19338 Brassica carinata HOM05D007203 ORTHO05D011558 2.1e-15 87.4 70 67.1
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 2.8e-15 87.0 50 86.0
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 3.6e-15 86.7 374 43.0
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 6.2e-15 85.9 133 70.7
C01p48560 Brassica napus HOM05D007203 ORTHO05D011558 1.4e-14 84.7 78 62.8
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 1.8e-14 84.3 90 58.9
BraA05t21718Z Brassica rapa HOM05D007203 ORTHO05D011558 2.4e-14 84.0 50 84.0
BcaB06g26429 Brassica carinata HOM05D007203 ORTHO05D011558 6.9e-14 82.4 50 82.0
BcaC09g49573 Brassica carinata HOM05D007203 ORTHO05D011558 1.2e-13 81.6 50 82.0
BcaC04g20467 Brassica carinata HOM05D007203 ORTHO05D027708 1.5e-13 81.3 124 49.2
BcaB03g14937 Brassica carinata HOM05D007203 ORTHO05D011558 3.4e-13 80.1 50 80.0
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 9.9e-13 78.6 105 47.6
BraA07t28681Z Brassica rapa HOM05D007203 ORTHO05D014981 1.7e-12 77.8 47 80.9
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 6.4e-12 75.9 159 48.4
A01p36010 Brassica napus HOM05D007203 ORTHO05D011558 1.1e-11 75.1 40 90.0
BolC9t57648H Brassica oleracea HOM05D007203 ORTHO05D011558 1.1e-11 75.1 40 90.0
BolC5t32923H Brassica oleracea HOM05D007203 ORTHO05D011558 1.4e-11 74.7 40 90.0
BcaB01g03085 Brassica carinata HOM05D007203 ORTHO05D011558 2.4e-11 73.9 66 62.1
BolC6t36235H Brassica oleracea HOM05D007203 ORTHO05D011558 2.4e-11 73.9 40 87.5
BcaB02g11368 Brassica carinata HOM05D007203 ORTHO05D011558 4.2e-11 73.2 50 78.0
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 3.5e-10 70.1 331 29.3
BcaB03g16102 Brassica carinata HOM05D007203 ORTHO05D011558 1.0e-09 68.6 50 74.0
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 1.7e-09 67.8 352 45.2
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 8.7e-09 65.5 379 28.8
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 2.5e-08 63.9 165 45.5
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 3.3e-08 63.5 67 52.2
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 4.8e-07 59.7 72 51.4
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 4.8e-07 59.7 72 51.4
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 1.1e-06 58.5 68 50.0
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 3.1e-06 57.0 67 49.3
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 9.0e-06 55.5 70 48.6


User provided reference genes

Program Settings