Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 1.4e-193 679.5 344 100.0
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 1.6e-189 666.0 344 97.4
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 1.3e-188 662.9 344 96.8
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 3.2e-182 641.7 344 92.7
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 5.4e-182 641.0 344 92.7
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 1.2e-160 570.1 338 85.8
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 7.1e-158 560.8 350 82.9
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 6.0e-157 557.8 314 91.7
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.6e-152 542.3 344 82.6
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.6e-152 542.3 344 82.6
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 2.0e-144 516.2 331 80.1
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 1.1e-142 510.4 296 87.8
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 1.5e-139 500.0 347 73.8
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 1.0e-132 477.2 297 81.5
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 2.0e-128 463.0 334 70.1
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 4.5e-128 461.8 323 72.4
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 3.2e-126 455.7 345 66.7
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 7.9e-125 451.1 323 69.3
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 3.9e-124 448.7 325 68.0
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.1e-123 447.2 325 67.7
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 1.1e-123 447.2 325 67.4
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 1.5e-123 446.8 337 67.4
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 2.5e-123 446.0 335 66.3
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 3.3e-123 445.7 342 64.9
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 3.7e-122 442.2 327 67.3
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 3.7e-122 442.2 343 66.5
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 8.2e-122 441.0 330 66.1
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 8.2e-122 441.0 310 69.4
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 1.1e-121 440.7 330 66.7
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 4.1e-121 438.7 334 67.1
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 6.9e-121 438.0 346 65.0
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 3.4e-120 435.6 336 65.2
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 5.8e-120 434.9 337 65.0
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.3e-119 433.7 341 65.1
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.7e-119 433.3 322 66.5
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 2.2e-119 433.0 331 65.3
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 2.9e-119 432.6 334 65.9
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 6.5e-119 431.4 304 68.1
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 1.1e-118 430.6 334 65.9
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 2.5e-118 429.5 344 65.1
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 2.5e-118 429.5 344 63.1
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 3.2e-118 429.1 305 68.5
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 3.2e-118 429.1 317 66.9
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 1.6e-117 426.8 325 64.3
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 1.6e-117 426.8 325 64.3
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.6e-117 426.8 342 63.2
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 2.1e-117 426.4 338 64.2
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 4.6e-117 425.2 319 67.7
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 4.6e-117 425.2 311 66.6
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 6.1e-117 424.9 328 63.7
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 3.0e-116 422.5 339 63.7
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 3.9e-116 422.2 309 67.3
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 6.7e-116 421.4 306 66.3
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 1.1e-115 420.6 311 66.6
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 1.5e-115 420.2 323 64.7
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 1.9e-115 419.9 326 65.0
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 5.7e-115 418.3 338 63.0
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 7.4e-115 417.9 311 65.9
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 9.7e-115 417.5 330 62.4
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 2.8e-114 416.0 348 61.8
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 2.8e-114 416.0 342 62.0
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 3.7e-114 415.6 332 62.7
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 3.7e-114 415.6 320 63.8
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 1.1e-113 414.1 311 65.0
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 3.1e-113 412.5 311 65.3
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 4.1e-113 412.1 322 62.7
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 4.1e-113 412.1 306 65.0
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 2.0e-112 409.8 329 61.7
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 7.7e-112 407.9 304 64.1
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.3e-111 407.1 333 63.4
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 3.8e-111 405.6 334 62.0
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 2.5e-110 402.9 342 62.0
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 2.1e-109 399.8 305 63.9
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.3e-108 396.4 304 62.2
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 8.8e-108 394.4 310 62.9
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 3.3e-107 392.5 350 62.9
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 6.9e-105 384.8 337 60.5
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 3.4e-104 382.5 315 62.5
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 2.3e-100 369.8 360 55.8
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 6.7e-100 368.2 298 64.8
CARHR214230 Cardamine hirsuta HOM05D006950 ORTHO05D008798 5.3e-97 358.6 209 87.1
AL7G52400 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 2.7e-93 346.3 329 61.4
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 3.3e-91 339.3 277 63.2
COL.COLO4_09336 Corchorus olitorius HOM05D006950 ORTHO05D008798 9.7e-91 337.8 305 57.7
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.6e-88 330.5 329 53.8
Rhsim10G0067400 Rhododendron simsii HOM05D006950 ORTHO05D008798 1.0e-87 327.8 318 56.3
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 3.8e-87 325.9 300 53.7
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 2.5e-86 323.2 219 79.0
Ca_04046_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 7.2e-86 321.6 232 66.4
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 3.6e-85 319.3 328 50.9
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 6.3e-82 308.5 244 63.9
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 1.2e-77 294.3 219 65.3
AUR62009002 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.8e-76 290.4 320 50.9
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 3.0e-76 289.7 305 47.2
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 3.0e-68 263.1 223 63.2
Cre04.g213100 Chlamydomonas reinhardtii HOM05D006950 ORTHO05D008798 2.4e-65 253.4 331 40.8
CBR_g51039 Chara braunii HOM05D006950 ORTHO05D008798 9.8e-59 231.5 354 37.6
MCO15G495 Micromonas commoda HOM05D006950 ORTHO05D008798 5.4e-57 225.7 271 43.9
Nn3g17880 Nelumbo nucifera HOM05D006950 ORTHO05D008798 1.7e-55 220.7 183 59.0
arahy.Tifrunner.gnm1.ann1.IRCK44 Arachis hypogaea HOM05D006950 ORTHO05D008798 1.9e-54 217.2 174 62.6
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 8.6e-47 191.8 129 77.5
CDE12G0582 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 8.1e-45 185.3 316 36.7
arahy.Tifrunner.gnm1.ann1.5L16AK Arachis hypogaea HOM05D006950 ORTHO05D008798 6.4e-42 175.6 204 46.1
arahy.Tifrunner.gnm1.ann1.J8JPII Arachis hypogaea HOM05D006950 ORTHO05D008798 2.1e-37 160.6 213 45.1
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 4.0e-36 156.4 139 56.1
PRCOL_00005525 Prasinoderma coloniale HOM05D006950 ORTHO05D008798 4.6e-32 142.9 345 32.2
Glyma.08G365850 Glycine max HOM05D006950 ORTHO05D008798 6.0e-32 142.5 97 69.1
Ca_04053_v3 Cicer arietinum L. HOM05D006950 ORTHO05D008798 1.9e-30 137.5 92 69.6
QL02p051310 Quercus lobata HOM05D006950 ORTHO05D008798 5.6e-30 136.0 86 74.4
arahy.Tifrunner.gnm1.ann1.BFZE3W Arachis hypogaea HOM05D006950 ORTHO05D008798 6.9e-28 129.0 97 66.0
Solyc02g086080.4 Solanum lycopersicum HOM05D006950 ORTHO05D008798 9.3e-25 118.6 98 58.2
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 7.9e-24 115.5 83 65.1
AagrBONN_evm.TU.Sc2ySwM_368.701 Anthoceros agrestis HOM05D006950 ORTHO05D008798 1.7e-23 114.4 271 28.8
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 2.3e-23 114.0 112 55.4
Mapoly0025s0077 Marchantia polymorpha HOM05D000224 ORTHO05D001489 6.0e-08 62.8 86 34.9
Mapoly0069s0018 Marchantia polymorpha HOM05D000224 ORTHO05D001489 1.8e-07 61.2 120 28.3
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 5.1e-07 59.7 30 83.3
Cpa.g.sc2.285 Carica papaya HOM05D000224 ORTHO05D002442 4.3e-06 56.6 102 35.3


User provided reference genes

Program Settings