Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t37009H Brassica oleracea HOM05D026661 ORTHO05D040484 3.3e-39 164.5 76 100.0
C01p39600 Brassica napus HOM05D026661 ORTHO05D040484 4.1e-26 120.9 68 80.9
BolC1t03909H Brassica oleracea HOM05D026661 ORTHO05D040470 1.1e-18 96.3 54 81.5
C04p57400 Brassica napus HOM05D026661 ORTHO05D040470 4.6e-17 90.9 54 79.6
Sp2g30230 Schrenkiella parvula HOM05D000001 ORTHO05D010258 4.6e-09 64.3 41 68.3
Carub.0008s2803 Capsella rubella HOM05D000001 ORTHO05D010258 1.7e-08 62.4 41 65.9
CARHR281250 Cardamine hirsuta HOM05D000001 ORTHO05D010258 2.3e-08 62.0 41 65.9
AL8G45030 Arabidopsis lyrata HOM05D000001 ORTHO05D010258 6.6e-08 60.5 41 65.9
Thhalv10003984m.g Eutrema salsugineum HOM05D000001 ORTHO05D010258 1.5e-07 59.3 41 63.4
AT5G66500 Arabidopsis thaliana HOM05D000001 ORTHO05D010258 1.9e-07 58.9 41 63.4
BraA07t29468Z Brassica rapa HOM05D000001 ORTHO05D010258 2.8e-06 55.1 41 63.4
BcaC06g34709 Brassica carinata HOM05D000001 ORTHO05D010258 3.6e-06 54.7 41 63.4
C07p25410 Brassica napus HOM05D000001 ORTHO05D010258 3.6e-06 54.7 41 63.4
BolC7t43064H Brassica oleracea HOM05D000001 ORTHO05D010258 3.6e-06 54.7 41 63.4
Aa31LG1G15020 Aethionema arabicum HOM05D000001 ORTHO05D010258 4.7e-06 54.3 41 61.0
A07p17480 Brassica napus HOM05D000001 ORTHO05D010258 6.2e-06 53.9 41 61.0
BcaB02g10023 Brassica carinata HOM05D000001 ORTHO05D010258 8.1e-06 53.5 41 61.0


User provided reference genes

Program Settings