Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2541.1 1267 100.0
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2537.7 1267 99.8
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2518.0 1267 99.1
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2516.9 1267 99.1
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2476.4 1269 97.6
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2471.4 1267 96.8
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2460.6 1268 96.1
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2444.5 1267 95.4
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2436.8 1267 94.7
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2431.4 1267 94.7
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2425.6 1267 94.6
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2400.9 1270 93.1
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2344.7 1267 90.4
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2218.7 1266 84.8
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2213.7 1268 84.8
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2209.1 1266 84.7
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2209.1 1267 84.5
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2208.3 1270 84.3
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2207.9 1264 84.8
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2206.4 1266 84.6
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2203.7 1267 84.1
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2201.4 1260 85.5
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2198.7 1271 83.9
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2196.0 1260 85.0
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2195.6 1267 84.6
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2194.1 1268 84.1
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2193.3 1267 84.5
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2189.8 1266 83.6
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2188.3 1267 84.4
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2184.8 1267 83.8
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2184.5 1267 84.1
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2183.3 1270 83.5
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2182.9 1270 83.2
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2182.9 1267 83.8
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2182.1 1267 83.6
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2181.0 1268 82.6
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2175.2 1267 83.1
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2174.4 1267 82.6
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2173.7 1267 82.6
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2172.9 1268 82.5
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2168.3 1268 82.1
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2168.3 1265 83.7
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2166.7 1265 83.1
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2166.7 1267 82.4
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2164.8 1265 81.7
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2164.8 1266 83.2
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2163.7 1263 83.1
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2163.3 1266 82.9
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2163.3 1268 82.3
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2162.9 1267 83.0
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2162.1 1268 82.6
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1270 81.9
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1267 82.7
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2158.3 1266 82.8
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2156.7 1275 82.0
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2153.3 1267 82.6
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2153.3 1271 81.9
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2152.5 1267 82.9
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2151.7 1072 99.8
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2149.4 1265 82.7
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2149.0 1267 82.2
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2148.2 1267 82.2
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2145.9 1259 82.7
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2142.9 1271 81.3
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2140.9 1238 83.9
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2140.2 1267 81.1
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2137.8 1265 82.1
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2136.3 1268 81.9
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1272 81.1
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2134.4 1266 81.6
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2134.0 1266 82.5
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2130.1 1271 81.1
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2129.8 1267 81.8
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2127.4 1267 82.1
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2126.7 1263 81.7
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2125.5 1267 81.3
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2122.4 1265 81.6
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2120.9 1263 81.3
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2119.4 1246 82.7
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2115.5 1271 80.6
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2112.4 1271 80.3
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2111.6 1206 85.2
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2107.0 1267 80.7
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2103.6 1273 80.3
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2082.0 1274 81.2
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2079.7 1271 79.5
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2075.4 1264 79.9
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2074.3 1264 79.6
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2073.9 1271 79.1
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2072.0 1265 80.1
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2069.7 1259 80.5
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2049.2 1270 78.0
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2031.5 1264 78.7
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2018.4 1267 77.7
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 2001.5 1263 77.8
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1973.0 1159 83.2
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1947.9 1277 74.5
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1895.6 1278 72.7
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1893.2 1271 73.2
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1868.2 1251 74.3
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1840.9 1266 71.7
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1837.4 1191 76.0
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1801.6 1089 80.4
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1792.3 1130 79.5
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1784.2 1268 70.3
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1767.3 1267 70.5
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1618.6 966 80.0
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1570.4 1322 62.3
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1545.0 1047 72.7
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1361.3 1264 59.2
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1357.4 814 80.5
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1332.8 1330 53.5
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1321.6 1395 53.0
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1238.4 725 82.1
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1159.1 1084 58.5
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1125.2 808 71.2
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 2.3e-262 909.8 1241 42.1
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 3.9e-262 909.1 570 78.2
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.1e-256 891.0 502 86.3
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 4.1e-227 792.7 653 62.5
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 5.2e-214 749.2 527 71.7
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 7.5e-197 692.2 450 76.7
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 2.1e-183 647.5 389 83.0
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 3.3e-128 464.2 359 66.3
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 7.7e-117 426.4 313 71.2
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 5.5e-107 393.7 270 73.7
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 6.3e-79 300.4 477 41.5
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 2.4e-70 271.9 169 75.1
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 7.8e-69 266.9 169 74.6
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 6.6e-68 263.8 169 73.4
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-63 249.6 138 89.9
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 1.6e-58 232.6 234 54.7
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 2.0e-48 199.1 116 79.3
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 5.6e-43 181.0 155 66.5
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.3e-39 169.9 91 85.7
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 1.1e-38 166.8 192 52.6
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 3.2e-30 138.7 101 61.4
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 3.7e-26 125.2 104 61.5


User provided reference genes

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