Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 1.6e-170 603.2 457 100.0
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-67 259.6 356 61.0
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 3.9e-63 246.5 228 64.9
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 9.0e-60 235.3 286 54.9
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.5e-59 234.6 408 50.7
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 6.5e-58 229.2 317 59.0
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-56 224.2 203 63.5
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-55 221.1 292 59.9
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 8.8e-55 218.8 198 66.2
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 2.8e-53 213.8 195 65.6
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 4.8e-53 213.0 275 50.9
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 4.8e-53 213.0 260 53.5
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 6.9e-52 209.1 270 64.8
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-51 208.4 178 64.6
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-51 208.0 278 49.3
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 1.5e-51 208.0 214 59.3
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-51 207.6 181 64.6
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 7.7e-51 205.7 181 64.1
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 7.7e-51 205.7 181 64.1
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 2.9e-50 203.8 265 62.6
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 5.0e-50 203.0 190 62.1
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-49 201.4 279 53.8
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-49 201.1 260 61.9
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 6.7e-47 192.6 146 71.2
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 6.3e-45 186.0 181 58.0
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 6.3e-45 186.0 225 55.1
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-44 185.3 225 54.2
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 3.1e-44 183.7 256 53.1
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 9.1e-44 182.2 141 70.2
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 1.2e-43 181.8 181 56.9
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-43 181.4 148 66.2
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 4.5e-43 179.9 272 50.0
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 1.3e-42 178.3 272 49.6
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 1.3e-42 178.3 238 54.2
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-42 178.3 151 64.9
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 1.3e-42 178.3 238 54.2
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-42 177.9 151 64.2
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 8.5e-42 175.6 193 54.9
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 2.5e-41 174.1 268 51.5
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 5.5e-41 172.9 149 63.8
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 7.2e-41 172.6 272 49.6
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 1.6e-40 171.4 236 53.4
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 8.0e-40 169.1 170 59.4
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 1.7e-37 161.4 323 43.3
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 4.8e-37 159.8 166 57.2
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 6.3e-37 159.5 111 75.7
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 8.2e-37 159.1 200 53.0
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 1.4e-36 158.3 289 50.2
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 5.3e-36 156.4 250 45.2
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 5.3e-36 156.4 162 58.6
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 9.1e-36 155.6 234 46.6
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 3.5e-35 153.7 195 51.3
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 4.5e-35 153.3 181 54.7
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 1.5e-33 148.3 325 43.1
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.5e-33 148.3 325 43.1
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-31 141.7 203 51.2
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 1.2e-30 138.7 129 65.9
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-28 131.3 224 44.6
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 3.5e-27 127.1 149 55.7
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 2.9e-26 124.0 80 76.2
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.5e-25 121.7 171 42.1
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 3.2e-25 120.6 236 39.8
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 1.6e-24 118.2 74 77.0
C04p32440 Brassica napus HOM05D008735 ORTHO05D099532 1.4e-23 115.2 183 60.1
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 6.8e-23 112.8 146 51.4
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 3.4e-22 110.5 132 55.3
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 7.5e-22 109.4 200 38.5
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 1.7e-21 108.2 164 42.1
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 6.3e-21 106.3 232 40.1
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 6.3e-21 106.3 171 57.3
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 6.3e-21 106.3 185 41.1
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 8.3e-21 105.9 199 55.3
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 5.4e-20 103.2 105 54.3
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 4.5e-19 100.1 134 44.0
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 7.7e-19 99.4 210 35.2
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 3.8e-18 97.1 165 61.2
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 1.9e-17 94.7 105 51.4
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 2.5e-17 94.4 157 49.0
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 2.5e-17 94.4 157 49.0
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 4.2e-17 93.6 73 71.2
C03p46960 Brassica napus HOM05D008735 ORTHO05D099308 4.2e-17 93.6 155 58.1
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 7.2e-17 92.8 84 61.9
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 1.0e-15 89.0 191 52.4
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-15 89.0 84 60.7
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 1.4e-15 88.6 150 60.0
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 1.8e-15 88.2 121 44.6
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 3.0e-15 87.4 117 49.6
C03p79170 Brassica napus HOM05D008735 ORTHO05D098026 3.0e-15 87.4 152 59.2
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 3.0e-15 87.4 121 44.6
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 4.0e-15 87.0 122 43.4
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 4.0e-15 87.0 122 43.4
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 4.0e-15 87.0 150 58.0
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 5.2e-15 86.7 132 41.7
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 6.8e-15 86.3 117 44.4
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 1.2e-14 85.5 122 41.8
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 2.6e-14 84.3 102 55.9
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 2.6e-14 84.3 131 39.7
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 3.4e-14 84.0 232 36.2
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 4.4e-14 83.6 86 45.3
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 5.7e-14 83.2 74 62.2
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 1.7e-13 81.6 101 55.4
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 8.3e-13 79.3 76 61.8
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 1.1e-12 79.0 68 63.2
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-12 78.2 85 49.4
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 2.4e-12 77.8 85 49.4
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 3.1e-12 77.4 65 64.6
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 4.1e-12 77.0 79 58.2
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 4.1e-12 77.0 85 49.4
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 7.0e-12 76.3 187 51.3
BraA05t21895Z Brassica rapa HOM05D004128 ORTHO05D008395 7.0e-12 76.3 53 75.5
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 9.2e-12 75.9 85 48.2
BcaC01g00876 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-11 74.7 37 91.9
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 3.5e-11 73.9 95 46.3
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 4.5e-11 73.6 152 42.1
C04p39160 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-11 73.6 37 91.9
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 5.9e-11 73.2 74 58.1
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 1.3e-10 72.0 344 34.6
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-10 71.2 64 60.9
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 2.3e-10 71.2 170 52.4
C09p44260 Brassica napus HOM05D008735 ORTHO05D016012 2.3e-10 71.2 135 57.8
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 2.9e-10 70.9 68 60.3
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 2.9e-10 70.9 68 60.3
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 2.9e-10 70.9 68 60.3
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 3.8e-10 70.5 156 53.2
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 6.6e-10 69.7 171 32.7
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 8.6e-10 69.3 77 55.8
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 8.6e-10 69.3 127 41.7
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-09 68.6 68 58.8
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 1.5e-09 68.6 348 36.5
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 1.9e-09 68.2 345 33.6
BcaC02g10903 Brassica carinata HOM05D004128 ORTHO05D013239 3.3e-09 67.4 105 45.7
BolC5t32922H Brassica oleracea HOM05D004128 ORTHO05D033837 9.5e-09 65.9 80 51.2
C03p79100 Brassica napus HOM05D008735 ORTHO05D101655 2.1e-08 64.7 137 54.0
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 2.1e-08 64.7 57 63.2
Sp6g02630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 2.1e-08 64.7 108 38.9
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 4.7e-08 63.5 55 49.1
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 1.0e-07 62.4 230 31.7
C08p39080 Brassica napus HOM05D004128 ORTHO05D018561 1.4e-07 62.0 160 54.4
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 2.3e-07 61.2 128 37.5
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 2.3e-07 61.2 114 32.5
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 3.1e-07 60.8 328 34.1
C08p27820 Brassica napus HOM05D004128 ORTHO05D013239 4.0e-07 60.5 75 58.7
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 5.2e-07 60.1 62 51.6
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 6.8e-07 59.7 53 60.4
SpUn0012_0140 Schrenkiella parvula HOM05D000286 ORTHO05D008395 6.8e-07 59.7 98 39.8
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 8.9e-07 59.3 77 54.5
BcaC07g40907 Brassica carinata HOM05D004128 ORTHO05D008395 1.2e-06 58.9 79 59.5
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-06 58.9 56 58.9
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-06 58.9 56 58.9
Sp5g20180 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.2e-06 58.9 93 40.9
BcaC04g21799 Brassica carinata HOM05D004128 ORTHO05D018561 1.5e-06 58.5 160 54.4
C09p52710 Brassica napus HOM05D004128 ORTHO05D013239 1.5e-06 58.5 75 57.3
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 2.0e-06 58.2 128 36.7
BolC6t37270H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-06 58.2 39 69.2
SpUn0048_0020 Schrenkiella parvula HOM05D041219 ORTHO05D008395 3.4e-06 57.4 65 44.6
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 5.8e-06 56.6 149 51.7
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 7.5e-06 56.2 161 29.2
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 7.5e-06 56.2 59 59.3


User provided reference genes

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