Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 5.6e-89 330.9 161 100.0
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 5.6e-89 330.9 161 100.0
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 1.6e-88 329.3 161 99.4
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 3.4e-86 321.6 161 97.5
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 4.9e-85 317.8 161 96.3
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 2.4e-76 288.9 161 89.4
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 3.3e-65 251.9 161 78.9
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 3.3e-65 251.9 161 78.9
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 5.6e-65 251.1 167 77.8
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 1.6e-64 249.6 154 81.2
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 1.6e-64 249.6 154 81.2
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 6.9e-63 244.2 168 75.0
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 6.4e-61 237.7 165 73.3
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 1.1e-60 236.9 167 76.6
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 3.9e-58 228.4 163 73.6
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 1.1e-57 226.9 165 71.5
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 4.8e-56 221.5 161 72.0
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 2.7e-43 179.1 172 59.3
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 4.3e-41 171.8 168 57.7
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 1.3e-24 117.1 168 45.2
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 1.7e-24 116.7 171 46.8
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 3.7e-24 115.5 163 49.1
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 4.8e-24 115.2 169 44.4
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.1e-23 114.0 183 42.1
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 1.1e-23 114.0 181 42.5
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.4e-23 113.6 170 44.7
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.8e-23 113.2 172 41.3
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 1.8e-23 113.2 166 45.2
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 1.2e-22 110.5 177 41.8
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.5e-22 110.2 178 42.1
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 2.0e-22 109.8 183 41.0
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 2.0e-22 109.8 163 46.0
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 2.6e-22 109.4 153 45.1
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 2.6e-22 109.4 177 40.7
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 4.5e-22 108.6 169 43.2
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 5.9e-22 108.2 164 45.1
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 1.3e-21 107.1 179 41.3
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 2.9e-21 105.9 183 41.0
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 2.9e-21 105.9 175 41.7
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 5.0e-21 105.1 167 43.1
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 6.5e-21 104.8 164 43.9
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 6.5e-21 104.8 162 41.4
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 8.5e-21 104.4 157 41.4
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.4e-20 103.6 175 38.3
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 1.9e-20 103.2 146 45.2
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 3.2e-20 102.4 156 41.7
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 3.2e-20 102.4 192 39.1
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 3.2e-20 102.4 192 39.1
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 3.2e-20 102.4 169 41.4
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 4.2e-20 102.1 163 41.7
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 7.2e-20 101.3 153 43.8
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 9.4e-20 100.9 163 41.1
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 9.4e-20 100.9 170 40.6
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 3.6e-19 99.0 157 40.8
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 3.6e-19 99.0 174 43.1
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 3.6e-19 99.0 139 49.6
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 4.7e-19 98.6 147 43.5
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 4.7e-19 98.6 157 42.7
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 1.0e-18 97.4 149 41.6
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 1.0e-18 97.4 166 42.2
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 3.0e-18 95.9 155 40.6
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 5.1e-18 95.1 148 42.6
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 8.8e-18 94.4 150 42.7
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 8.8e-18 94.4 140 45.0
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 8.8e-18 94.4 174 37.9
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 1.5e-17 93.6 164 39.6
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 2.0e-17 93.2 175 40.0
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 2.0e-17 93.2 175 40.0
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 3.3e-17 92.4 153 42.5
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 3.3e-17 92.4 141 48.9
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 4.4e-17 92.0 150 43.3
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 5.7e-17 91.7 163 38.7
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 9.7e-17 90.9 155 41.3
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 9.7e-17 90.9 155 41.3
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 3.7e-16 89.0 140 38.6
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 3.7e-16 89.0 178 37.6
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 3.7e-16 89.0 149 40.9
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 3.7e-16 89.0 147 43.5
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 4.8e-16 88.6 155 37.4
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 8.2e-16 87.8 131 46.6
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 8.2e-16 87.8 154 36.4
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 4.1e-15 85.5 155 38.7
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 9.1e-15 84.3 175 38.9
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 5.9e-14 81.6 183 36.6
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 1.3e-13 80.5 64 64.1
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 2.2e-13 79.7 135 40.7
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 3.8e-13 79.0 164 36.0
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 3.8e-13 79.0 70 57.1
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 6.5e-13 78.2 127 39.4
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 8.5e-13 77.8 135 41.5
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 1.1e-12 77.4 138 38.4
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 2.5e-12 76.3 139 43.2
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 3.2e-12 75.9 162 37.0
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 4.2e-12 75.5 163 33.7
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 1.6e-11 73.6 164 37.2
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 3.6e-11 72.4 153 31.4
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 6.1e-11 71.6 123 35.0
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 1.8e-10 70.1 154 30.5
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 3.9e-10 68.9 163 35.0
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 6.7e-10 68.2 169 31.4
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 1.5e-09 67.0 150 35.3
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 9.7e-09 64.3 169 32.0
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 9.7e-09 64.3 169 32.0
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 1.3e-08 63.9 149 34.2
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.2e-08 63.2 107 36.4
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 6.3e-08 61.6 89 39.3
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 8.2e-08 61.2 165 32.7
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 8.2e-08 61.2 178 32.6
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 8.2e-08 61.2 138 33.3
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 1.1e-07 60.8 98 38.8
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 3.1e-07 59.3 149 32.2
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 1.2e-06 57.4 131 32.8
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 1.2e-06 57.4 132 35.6
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 7.7e-06 54.7 43 62.8


User provided reference genes

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