Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t36741H Brassica oleracea HOM05D001350 ORTHO05D001091 9.7e-32 139.4 66 100.0
BolC6t36742H Brassica oleracea HOM05D001350 ORTHO05D001091 9.7e-32 139.4 66 100.0
BraA05t21293Z Brassica rapa HOM05D001350 ORTHO05D001091 9.1e-30 132.9 66 93.9
BolC8t47706H Brassica oleracea HOM05D001350 ORTHO05D001091 2.2e-28 128.3 66 89.4
BolC4t24196H Brassica oleracea HOM05D001350 ORTHO05D001091 1.9e-27 125.2 66 86.4
BolC5t32119H Brassica oleracea HOM05D001350 ORTHO05D001091 1.9e-27 125.2 66 86.4
BolC2t10269H Brassica oleracea HOM05D001350 ORTHO05D001091 2.5e-27 124.8 66 89.4
BolC9t56728H Brassica oleracea HOM05D001350 ORTHO05D001091 3.2e-27 124.4 66 89.4
BraA08t32762Z Brassica rapa HOM05D001350 ORTHO05D001091 4.2e-27 124.0 66 84.8
BolC6t36365H Brassica oleracea HOM05D001350 ORTHO05D001091 5.5e-27 123.6 66 86.4
BolC8t47493H Brassica oleracea HOM05D001350 ORTHO05D001091 5.5e-27 123.6 66 84.8
BraA07t28271Z Brassica rapa HOM05D001350 ORTHO05D001091 5.5e-27 123.6 66 84.8
BolC6t37187H Brassica oleracea HOM05D001350 ORTHO05D001091 7.2e-27 123.2 66 84.8
BolC4t23016H Brassica oleracea HOM05D001350 ORTHO05D001091 1.6e-26 122.1 66 83.3
BolC9t56795H Brassica oleracea HOM05D001350 ORTHO05D001091 2.7e-26 121.3 66 83.3
BolC4t23606H Brassica oleracea HOM05D001350 ORTHO05D001091 4.7e-26 120.6 66 84.8
BolC7t40733H Brassica oleracea HOM05D001350 ORTHO05D001091 6.1e-26 120.2 66 86.4
BolC1t03874H Brassica oleracea HOM05D001350 ORTHO05D001091 2.3e-25 118.2 66 83.3
BolC2t08784H Brassica oleracea HOM05D001350 ORTHO05D001091 2.3e-25 118.2 66 81.8
BolC6t37767H Brassica oleracea HOM05D001350 ORTHO05D001091 2.3e-25 118.2 66 83.3
BolC2t10633H Brassica oleracea HOM05D001350 ORTHO05D001091 3.0e-25 117.9 66 80.3
BolC4t21940H Brassica oleracea HOM05D001350 ORTHO05D001091 3.0e-25 117.9 66 81.8
BolC5t32645H Brassica oleracea HOM05D001350 ORTHO05D001091 3.0e-25 117.9 66 83.3
BolC6t37482H Brassica oleracea HOM05D001350 ORTHO05D001091 3.0e-25 117.9 66 83.3
BolC2t11083H Brassica oleracea HOM05D001350 ORTHO05D001091 4.0e-25 117.5 66 83.3
BolC9t56659H Brassica oleracea HOM05D001350 ORTHO05D001091 6.8e-25 116.7 66 83.3
BolC3t17824H Brassica oleracea HOM05D001350 ORTHO05D001091 8.8e-25 116.3 66 83.3
BolC9t56796H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-24 115.9 66 81.8
BolC2t10087H Brassica oleracea HOM05D001350 ORTHO05D001091 1.5e-24 115.5 66 81.8
BolC8t47507H Brassica oleracea HOM05D001350 ORTHO05D001091 1.5e-24 115.5 66 81.8
BolC4t27355H Brassica oleracea HOM05D001350 ORTHO05D001091 2.0e-24 115.2 66 80.3
BolC5t32516H Brassica oleracea HOM05D001350 ORTHO05D001091 2.0e-24 115.2 65 83.1
BolC6t39905H Brassica oleracea HOM05D001350 ORTHO05D001091 2.0e-24 115.2 66 81.8
BolC1t03399H Brassica oleracea HOM05D001350 ORTHO05D001091 3.4e-24 114.4 66 83.3
BolC5t32565H Brassica oleracea HOM05D001350 ORTHO05D001091 3.4e-24 114.4 66 81.8
BolC4t24436H Brassica oleracea HOM05D001350 ORTHO05D001091 4.4e-24 114.0 65 80.0
BolC5t32144H Brassica oleracea HOM05D001350 ORTHO05D001091 4.4e-24 114.0 66 80.3
BolC7t41929H Brassica oleracea HOM05D001350 ORTHO05D001091 4.4e-24 114.0 66 80.3
BolC9t56773H Brassica oleracea HOM05D001350 ORTHO05D001091 4.4e-24 114.0 66 80.3
BolC2t07867H Brassica oleracea HOM05D001350 ORTHO05D001091 5.7e-24 113.6 66 77.3
BolC4t26041H Brassica oleracea HOM05D001350 ORTHO05D001091 5.7e-24 113.6 63 81.0
BolC2t09224H Brassica oleracea HOM05D001350 ORTHO05D001091 7.5e-24 113.2 66 80.3
BolC1t03291H Brassica oleracea HOM05D001350 ORTHO05D001091 9.8e-24 112.8 66 78.8
BolC1t00995H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-23 112.5 66 78.8
BolC3t17244H Brassica oleracea HOM05D001350 ORTHO05D001091 1.7e-23 112.1 64 81.2
BolC8t47610H Brassica oleracea HOM05D001350 ORTHO05D001091 1.7e-23 112.1 66 80.3
BolC5t32255H Brassica oleracea HOM05D001350 ORTHO05D001091 2.8e-23 111.3 66 77.3
BolC7t40853H Brassica oleracea HOM05D001350 ORTHO05D001091 2.8e-23 111.3 66 75.8
BolC6t35228H Brassica oleracea HOM05D001350 ORTHO05D001091 4.8e-23 110.5 66 78.8
BraA01t02869Z Brassica rapa HOM05D001350 ORTHO05D001091 4.8e-23 110.5 66 80.3
BolC5t32631H Brassica oleracea HOM05D001350 ORTHO05D001091 8.3e-23 109.8 66 75.8
C02p28310 Brassica napus HOM05D001350 ORTHO05D001091 1.1e-22 109.4 66 72.7
BcaC08g46308 Brassica carinata HOM05D001350 ORTHO05D001091 2.4e-22 108.2 66 81.8
BolC2t09253H Brassica oleracea HOM05D001350 ORTHO05D001091 2.4e-22 108.2 66 78.8
C01p31730 Brassica napus HOM05D001350 ORTHO05D001091 3.1e-22 107.8 66 72.7
BraA10t43821Z Brassica rapa HOM05D001350 ORTHO05D001091 4.1e-22 107.5 66 75.8
BolC8t48033H Brassica oleracea HOM05D001350 ORTHO05D001091 9.1e-22 106.3 66 69.7
BraA10t42930Z Brassica rapa HOM05D001350 ORTHO05D001091 9.1e-22 106.3 57 84.2
BolC1t03745H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-21 105.9 57 84.2
BolC1t03124H Brassica oleracea HOM05D001350 ORTHO05D001091 1.6e-21 105.5 66 75.8
BolC9t56667H Brassica oleracea HOM05D001350 ORTHO05D001091 1.6e-21 105.5 66 69.7
BolC1t03127H Brassica oleracea HOM05D001350 ORTHO05D001091 2.0e-21 105.1 66 71.2
BolC1t03108H Brassica oleracea HOM05D001350 ORTHO05D001091 2.7e-21 104.8 66 71.2
BolC6t36997H Brassica oleracea HOM05D001350 ORTHO05D001091 2.7e-21 104.8 63 73.0
BolC9t55569H Brassica oleracea HOM05D001350 ORTHO05D001091 2.7e-21 104.8 66 69.7
BolC8t47959H Brassica oleracea HOM05D001350 ORTHO05D001091 3.5e-21 104.4 66 68.2
BraA08t32587Z Brassica rapa HOM05D001350 ORTHO05D001091 3.5e-21 104.4 66 68.2
BolC4t25310H Brassica oleracea HOM05D001350 ORTHO05D001091 4.5e-21 104.0 66 69.7
BolC6t36393H Brassica oleracea HOM05D001350 ORTHO05D001091 4.5e-21 104.0 66 71.2
BolC6t35325H Brassica oleracea HOM05D001350 ORTHO05D001091 7.7e-21 103.2 61 73.8
BraA01t02816Z Brassica rapa HOM05D001350 ORTHO05D001091 1.0e-20 102.8 66 74.2
BolC2t06976H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-20 102.4 66 68.2
BolC3t20333H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-20 102.4 66 68.2
BraA01t02292Z Brassica rapa HOM05D001350 ORTHO05D001091 2.3e-20 101.7 66 69.7
BraA02t07543Z Brassica rapa HOM05D001350 ORTHO05D001091 2.3e-20 101.7 66 68.2
BolC4t24623H Brassica oleracea HOM05D001350 ORTHO05D001091 3.8e-20 100.9 52 88.5
BolC9t57512H Brassica oleracea HOM05D001350 ORTHO05D001091 3.8e-20 100.9 66 69.7
BolC5t32413H Brassica oleracea HOM05D001350 ORTHO05D001091 6.6e-20 100.1 61 70.5
BolC2t08480H Brassica oleracea HOM05D001350 ORTHO05D001091 8.6e-20 99.8 66 66.7
BolC2t09152H Brassica oleracea HOM05D001350 ORTHO05D001091 8.6e-20 99.8 66 66.7
BolC2t11992H Brassica oleracea HOM05D001350 ORTHO05D001091 8.6e-20 99.8 66 69.7
BolC7t41078H Brassica oleracea HOM05D001350 ORTHO05D001091 8.6e-20 99.8 66 68.2
BolC6t36987H Brassica oleracea HOM05D001350 ORTHO05D001091 1.1e-19 99.4 60 75.0
BraA05t20981Z Brassica rapa HOM05D001350 ORTHO05D001091 1.5e-19 99.0 57 78.9
BolC5t32644H Brassica oleracea HOM05D001350 ORTHO05D001091 5.5e-19 97.1 62 72.6
BolC2t08740H Brassica oleracea HOM05D001350 ORTHO05D001091 7.2e-19 96.7 60 73.3
BolC6t36993H Brassica oleracea HOM05D001350 ORTHO05D001091 1.6e-18 95.5 57 71.9
BolC7t42172H Brassica oleracea HOM05D001350 ORTHO05D001091 2.8e-18 94.7 59 71.2
BolC7t42920H Brassica oleracea HOM05D001350 ORTHO05D001091 1.0e-17 92.8 52 86.5
BolC2t09993H Brassica oleracea HOM05D001350 ORTHO05D001091 1.4e-17 92.4 59 67.8
BraA06t27647Z Brassica rapa HOM05D001350 ORTHO05D001091 1.8e-17 92.0 66 65.2
BraA07t27867Z Brassica rapa HOM05D001350 ORTHO05D001091 5.2e-17 90.5 66 63.6
BolC5t32013H Brassica oleracea HOM05D001350 ORTHO05D001091 3.4e-16 87.8 52 78.8
BraA09t38585Z Brassica rapa HOM05D001350 ORTHO05D001091 5.7e-16 87.0 43 88.4
BolC4t24131H Brassica oleracea HOM05D001350 ORTHO05D001091 7.5e-16 86.7 52 75.0
BolC2t10364H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-15 85.9 43 88.4
BolC2t10469H Brassica oleracea HOM05D001350 ORTHO05D001091 1.7e-15 85.5 52 76.9
BraA06t25260Z Brassica rapa HOM05D001350 ORTHO05D001091 2.8e-15 84.7 43 86.0
BolC6t36502H Brassica oleracea HOM05D001350 ORTHO05D001091 3.7e-15 84.3 43 86.0
BolC7t40854H Brassica oleracea HOM05D001350 ORTHO05D001091 4.9e-15 84.0 43 83.7
BolC9t57081H Brassica oleracea HOM05D001350 ORTHO05D001091 1.1e-14 82.8 43 88.4
BraA06t25712Z Brassica rapa HOM05D001350 ORTHO05D001091 2.4e-14 81.6 40 87.5
BraA10t43479Z Brassica rapa HOM05D001350 ORTHO05D001091 2.4e-14 81.6 43 81.4
BolC9t56863H Brassica oleracea HOM05D001350 ORTHO05D001091 4.1e-14 80.9 40 87.5
BraA08t33078Z Brassica rapa HOM05D001350 ORTHO05D001091 4.1e-14 80.9 43 81.4
BraA07t28546Z Brassica rapa HOM05D001350 ORTHO05D001091 7.0e-14 80.1 43 81.4
BolC1t03318H Brassica oleracea HOM05D001350 ORTHO05D001091 9.2e-14 79.7 40 87.5
BolC7t43614H Brassica oleracea HOM05D001350 ORTHO05D001091 9.2e-14 79.7 43 79.1
BolC5t32425H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-13 79.3 41 90.2
BolC2t08609H Brassica oleracea HOM05D001350 ORTHO05D001091 1.6e-13 79.0 43 81.4
BolC2t11237H Brassica oleracea HOM05D001350 ORTHO05D001091 1.6e-13 79.0 41 85.4
BolC2t10160H Brassica oleracea HOM05D001350 ORTHO05D001091 3.5e-13 77.8 47 78.7
BolC3t19954H Brassica oleracea HOM05D001350 ORTHO05D001091 3.5e-13 77.8 40 87.5
BolC2t07522H Brassica oleracea HOM05D001350 ORTHO05D001091 5.9e-13 77.0 43 76.7
BolC2t11867H Brassica oleracea HOM05D001350 ORTHO05D001091 5.9e-13 77.0 46 73.9
C07p05540 Brassica napus HOM05D001350 ORTHO05D001091 1.0e-12 76.3 40 85.0
BolC1t04391H Brassica oleracea HOM05D001350 ORTHO05D001091 1.0e-12 76.3 43 81.4
BolC2t07999H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-12 75.9 39 87.2
BolC8t51566H Brassica oleracea HOM05D001350 ORTHO05D001091 3.9e-12 74.3 43 74.4
BolC5t31454H Brassica oleracea HOM05D001350 ORTHO05D001091 6.6e-12 73.6 41 82.9
BraA02t07810Z Brassica rapa HOM05D001350 ORTHO05D001091 1.5e-11 72.4 53 62.3
BolC5t29935H Brassica oleracea HOM05D001350 ORTHO05D001091 2.5e-11 71.6 34 91.2
BraA09t38741Z Brassica rapa HOM05D001350 ORTHO05D001091 2.5e-11 71.6 43 69.8
BolC2t08525H Brassica oleracea HOM05D001350 ORTHO05D033797 4.3e-11 70.9 39 79.5
BolC3t19762H Brassica oleracea HOM05D001350 ORTHO05D001091 4.3e-11 70.9 40 77.5
BolC1t01554H Brassica oleracea HOM05D001350 ORTHO05D033797 5.6e-11 70.5 40 80.0
BolC7t40875H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-10 69.3 43 65.1
BolC7t42715H Brassica oleracea HOM05D001350 ORTHO05D011193 8.0e-10 66.6 69 49.3
BolC8t47822H Brassica oleracea HOM05D001350 ORTHO05D001091 8.0e-10 66.6 43 65.1
BolC1t04252H Brassica oleracea HOM05D001350 ORTHO05D001091 2.3e-09 65.1 36 80.6
BolC7t43993H Brassica oleracea HOM05D001350 ORTHO05D001091 2.3e-09 65.1 34 79.4
BolC6t38164H Brassica oleracea HOM05D001350 ORTHO05D001091 4.0e-09 64.3 39 71.8
BraA05t20574Z Brassica rapa HOM05D001350 ORTHO05D001091 5.2e-09 63.9 52 55.8
BraA08t32638Z Brassica rapa HOM05D001350 ORTHO05D001091 5.2e-09 63.9 43 67.4
BolC4t22981H Brassica oleracea HOM05D001350 ORTHO05D001091 1.2e-08 62.8 40 65.0
BraA05t21369Z Brassica rapa HOM05D001350 ORTHO05D033797 1.2e-08 62.8 38 73.7
BraA08t32803Z Brassica rapa HOM05D001350 ORTHO05D001091 1.2e-08 62.8 36 75.0
BolC5t32508H Brassica oleracea HOM05D001350 ORTHO05D001091 2.0e-08 62.0 40 62.5
BolC5t33249H Brassica oleracea HOM05D001350 ORTHO05D011193 2.0e-08 62.0 67 47.8
AL8G13400 Arabidopsis lyrata HOM05D001368 ORTHO05D001675 2.6e-08 61.6 62 45.2
BolC5t32428H Brassica oleracea HOM05D001350 ORTHO05D001091 4.4e-08 60.8 36 72.2
BolC5t32437H Brassica oleracea HOM05D001350 ORTHO05D001091 5.8e-08 60.5 36 72.2
BolC2t10274H Brassica oleracea HOM05D001350 ORTHO05D001091 7.5e-08 60.1 43 60.5
BolC2t10385H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-07 59.3 40 57.5
BolC4t24993H Brassica oleracea HOM05D001350 ORTHO05D001091 1.3e-07 59.3 36 69.4
Sp4g11850 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.7e-07 58.9 65 44.6
Sp5g17980 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.7e-07 58.9 65 41.5
BolC1t04083H Brassica oleracea HOM05D001350 ORTHO05D001091 2.2e-07 58.5 36 66.7
BolC2t09000H Brassica oleracea HOM05D001350 ORTHO05D011193 2.2e-07 58.5 67 44.8
BolC2t09023H Brassica oleracea HOM05D001350 ORTHO05D001091 2.2e-07 58.5 40 57.5
Sp3g23930 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.2e-07 58.5 56 50.0
Sp7g26700 Schrenkiella parvula HOM05D001350 ORTHO05D001091 2.2e-07 58.5 67 41.8
BcaC07g39133 Brassica carinata HOM05D001350 ORTHO05D001091 2.9e-07 58.2 67 41.8
BolC9t56311H Brassica oleracea HOM05D001350 ORTHO05D001091 2.9e-07 58.2 64 46.9
BolC1t04196H Brassica oleracea HOM05D001350 ORTHO05D001091 3.7e-07 57.8 35 71.4
BolC7t44101H Brassica oleracea HOM05D001350 ORTHO05D011193 3.7e-07 57.8 64 43.8
BolC9t55103H Brassica oleracea HOM05D001350 ORTHO05D001091 4.9e-07 57.4 31 87.1
CARHR102280 Cardamine hirsuta HOM05D001350 ORTHO05D001091 4.9e-07 57.4 67 40.3
BraA07t28455Z Brassica rapa HOM05D001350 ORTHO05D001091 8.3e-07 56.6 34 70.6
BolC6t36378H Brassica oleracea HOM05D001350 ORTHO05D001091 1.1e-06 56.2 40 57.5
BraA02t08055Z Brassica rapa HOM05D001350 ORTHO05D001091 1.4e-06 55.8 44 54.5
BolC7t42026H Brassica oleracea HOM05D001350 ORTHO05D011193 1.9e-06 55.5 67 43.3
Sp2g06040 Schrenkiella parvula HOM05D001350 ORTHO05D001091 1.9e-06 55.5 65 40.0
BraSC37t46148Z Brassica rapa HOM05D001350 ORTHO05D001091 2.4e-06 55.1 66 39.4
BolC5t33276H Brassica oleracea HOM05D001350 ORTHO05D001091 3.2e-06 54.7 31 77.4
BolC9t57247H Brassica oleracea HOM05D001350 ORTHO05D001091 3.2e-06 54.7 36 66.7
Thhalv10019496m.g Eutrema salsugineum HOM05D001350 ORTHO05D001091 3.2e-06 54.7 67 43.3
Sp3g24950 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.2e-06 54.7 62 43.5
Sp5g17770 Schrenkiella parvula HOM05D001350 ORTHO05D001091 3.2e-06 54.7 61 47.5
BolC4t24181H Brassica oleracea HOM05D001350 ORTHO05D001091 7.0e-06 53.5 40 57.5
BolC7t42922H Brassica oleracea HOM05D001350 ORTHO05D001091 7.0e-06 53.5 33 75.8


User provided reference genes

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