Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 9.1e-176 620.2 320 100.0
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.3e-174 616.3 320 99.7
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 1.5e-173 612.8 320 99.1
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 7.0e-168 594.0 321 96.9
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.6e-164 582.8 319 94.7
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.5e-154 549.7 325 88.0
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 1.1e-152 543.5 325 87.1
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 1.9e-152 542.7 324 86.4
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 2.3e-150 535.8 324 85.5
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 2.6e-146 522.3 324 83.6
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 7.5e-146 520.8 324 84.6
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 1.3e-145 520.0 277 96.8
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 5.4e-144 514.6 325 80.3
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 1.3e-134 483.4 325 76.6
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 2.1e-124 449.5 324 70.4
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 2.1e-124 449.5 328 71.3
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 1.5e-122 443.4 327 68.8
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 9.9e-122 440.7 323 72.1
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.2e-121 439.5 322 69.6
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.2e-120 435.3 326 69.9
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 4.2e-120 435.3 322 70.8
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 4.6e-119 431.8 327 69.1
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 1.8e-118 429.9 323 69.7
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 2.3e-118 429.5 320 68.4
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 5.1e-118 428.3 322 68.6
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 1.9e-117 426.4 324 68.2
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 7.4e-117 424.5 308 68.8
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 2.1e-116 422.9 314 67.8
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 2.1e-116 422.9 323 67.8
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 4.8e-116 421.8 314 67.8
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 4.8e-116 421.8 323 67.5
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 6.2e-116 421.4 331 68.3
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 8.1e-116 421.0 293 71.0
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 1.1e-115 420.6 325 68.3
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 1.8e-115 419.9 321 67.9
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.8e-115 419.9 326 67.8
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 4.0e-115 418.7 324 66.4
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 5.3e-115 418.3 322 67.4
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 1.2e-114 417.2 309 68.9
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 3.4e-114 415.6 254 79.5
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 3.4e-114 415.6 267 76.4
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 7.6e-114 414.5 325 66.5
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 1.3e-113 413.7 334 63.5
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 1.3e-113 413.7 269 75.5
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 1.7e-113 413.3 254 79.1
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 1.7e-113 413.3 283 72.8
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 2.2e-113 412.9 321 66.7
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 2.4e-112 409.5 280 72.1
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 3.2e-112 409.1 309 65.4
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 4.2e-112 408.7 340 65.0
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 4.2e-112 408.7 270 76.3
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 7.1e-112 407.9 288 70.5
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 1.2e-111 407.1 291 70.8
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 1.2e-111 407.1 278 72.7
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 1.2e-111 407.1 307 66.8
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 1.2e-111 407.1 329 62.3
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 1.2e-111 407.1 279 69.9
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 2.1e-111 406.4 328 64.9
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 2.7e-111 406.0 320 62.8
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 3.5e-111 405.6 327 63.9
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 4.6e-111 405.2 322 64.3
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 1.0e-110 404.1 316 64.6
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 1.0e-110 404.1 322 66.1
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 2.3e-110 402.9 278 71.2
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 8.7e-110 401.0 278 70.9
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 3.3e-109 399.1 325 65.5
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 5.6e-109 398.3 341 61.3
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 7.4e-109 397.9 322 63.7
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 7.4e-109 397.9 323 63.8
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 9.6e-109 397.5 270 74.8
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 1.3e-108 397.1 335 63.6
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 8.1e-108 394.4 278 69.4
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 4.5e-106 388.7 237 78.9
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 7.6e-106 387.9 336 60.7
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 2.9e-105 386.0 303 64.7
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.6e-103 380.2 257 72.4
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 1.6e-103 380.2 310 64.2
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 2.1e-103 379.8 260 71.5
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.8e-102 376.7 298 65.4
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 3.0e-102 375.9 270 68.9
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 6.7e-102 374.8 298 65.4
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.5e-101 373.6 234 76.5
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 2.5e-101 372.9 269 68.0
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 1.6e-100 370.2 272 69.5
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 2.8e-100 369.4 236 75.0
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 1.4e-99 367.1 306 61.8
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 5.9e-98 361.7 251 69.3
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 3.6e-95 352.4 246 67.9
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 5.1e-94 348.6 237 71.7
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 1.5e-93 347.1 256 68.0
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 6.3e-92 341.7 210 78.6
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 3.1e-91 339.3 318 56.6
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 3.1e-91 339.3 259 66.0
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 5.3e-91 338.6 267 67.4
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 5.0e-89 332.0 209 75.6
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 5.0e-89 332.0 257 66.1
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 2.3e-86 323.2 215 74.0
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 3.1e-83 312.8 340 51.2
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 2.5e-80 303.1 295 54.6
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 2.4e-75 286.6 278 51.8
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 6.1e-71 271.9 289 50.5
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 8.8e-70 268.1 243 54.7
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 6.3e-68 261.9 223 63.2
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 1.3e-65 254.2 226 57.1
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 2.1e-63 246.9 148 79.7
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 2.7e-63 246.5 251 51.4
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 3.0e-54 216.5 292 43.5
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.7e-49 200.7 129 75.2
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 4.3e-40 169.5 105 77.1
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.0e-33 146.7 88 81.8
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 8.6e-33 145.2 88 81.8
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 7.5e-29 132.1 81 80.2
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 6.6e-25 119.0 76 80.3
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 3.2e-19 100.1 261 31.4
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 9.2e-19 98.6 65 72.3
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.5e-18 96.7 64 73.4
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 2.4e-11 73.9 36 100.0
Aa31LG8G11430 Aethionema arabicum HOM05D002105 ORTHO05D001271 7.8e-10 68.9 75 52.0
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 8.7e-09 65.5 51 62.7
C05p47850 Brassica napus HOM05D022203 ORTHO05D024331 1.8e-06 57.8 28 96.4
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 9.0e-06 55.5 95 41.1


User provided reference genes

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