Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 1.8e-207 725.7 367 100.0
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 1.8e-207 725.7 367 100.0
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 2.0e-203 712.2 367 97.8
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 2.5e-201 705.3 367 97.0
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 2.5e-201 705.3 367 97.0
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 3.7e-189 664.8 368 93.5
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 1.1e-172 610.1 373 84.2
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 1.1e-172 610.1 370 85.4
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 3.2e-172 608.6 372 83.9
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 5.9e-171 604.4 374 83.7
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 7.8e-171 604.0 373 83.6
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 4.6e-163 578.2 372 80.1
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 1.0e-162 577.0 368 79.9
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 1.2e-160 570.1 375 79.5
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 2.5e-153 545.8 384 75.5
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 6.2e-152 541.2 419 70.2
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 6.2e-144 514.6 370 70.5
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 2.4e-140 502.7 320 82.8
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 7.6e-134 481.1 375 64.0
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 1.0e-130 470.7 340 70.6
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 3.9e-130 468.8 346 68.2
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 6.2e-128 461.5 354 66.1
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 4.0e-127 458.8 329 69.3
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 6.9e-127 458.0 331 68.9
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 3.4e-126 455.7 336 68.8
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 4.5e-126 455.3 326 69.0
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.7e-125 453.4 326 68.7
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 1.7e-125 453.4 335 67.8
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.2e-125 453.0 337 67.4
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 2.9e-125 452.6 355 64.5
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 2.9e-125 452.6 340 66.8
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 2.9e-125 452.6 365 63.6
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 3.8e-125 452.2 337 67.7
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 3.8e-125 452.2 337 67.7
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 4.9e-125 451.8 339 67.3
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 8.4e-125 451.1 369 63.4
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 8.4e-125 451.1 360 65.0
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 1.9e-124 449.9 326 68.4
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 3.2e-124 449.1 336 67.6
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 3.2e-124 449.1 325 68.6
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 7.1e-124 448.0 357 63.6
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 7.1e-124 448.0 323 69.0
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 7.1e-124 448.0 333 67.0
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 1.2e-123 447.2 337 66.2
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 2.1e-123 446.4 333 66.4
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 2.1e-123 446.4 367 62.7
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.7e-123 446.0 338 66.6
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 3.5e-123 445.7 320 68.8
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 3.5e-123 445.7 354 63.8
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 3.5e-123 445.7 331 67.4
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 3.5e-123 445.7 350 66.3
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 4.6e-123 445.3 334 66.5
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 4.6e-123 445.3 328 67.4
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 4.6e-123 445.3 344 65.7
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 4.6e-123 445.3 366 62.6
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 6.0e-123 444.9 321 68.8
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 6.0e-123 444.9 336 65.5
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 6.0e-123 444.9 338 65.4
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 1.0e-122 444.1 328 67.4
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 1.3e-122 443.7 324 67.3
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 3.9e-122 442.2 351 63.8
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 3.9e-122 442.2 338 65.4
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 5.1e-122 441.8 364 61.5
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 5.1e-122 441.8 340 65.0
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 5.1e-122 441.8 338 65.4
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 1.5e-121 440.3 327 67.3
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 4.3e-121 438.7 339 65.2
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 8.2e-120 434.5 335 65.1
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 8.2e-120 434.5 335 65.1
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 1.4e-119 433.7 324 66.7
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 1.8e-119 433.3 358 62.3
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 2.4e-119 433.0 334 64.7
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 5.3e-119 431.8 379 59.9
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 1.2e-118 430.6 340 62.9
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 1.5e-118 430.3 365 61.9
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 3.4e-118 429.1 355 62.5
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 5.8e-118 428.3 385 59.7
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 1.0e-117 427.6 278 74.1
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 2.5e-116 422.9 353 60.1
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 4.2e-116 422.2 342 63.7
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 7.1e-116 421.4 380 56.8
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 9.3e-116 421.0 324 64.5
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 2.7e-115 419.5 333 63.7
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 3.5e-115 419.1 313 65.8
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 1.1e-113 414.1 344 62.8
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 6.3e-112 408.3 364 58.0
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 6.3e-112 408.3 364 58.0
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.4e-111 406.4 364 57.7
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 1.5e-110 403.7 313 62.9
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 2.0e-110 403.3 384 56.5
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 5.9e-110 401.7 460 49.8
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 6.5e-109 398.3 321 62.3
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 1.1e-108 397.5 396 56.6
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 1.9e-108 396.7 324 61.4
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 7.2e-108 394.8 452 48.9
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 9.3e-108 394.4 373 57.1
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 1.0e-106 391.0 281 68.3
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 6.3e-104 381.7 331 59.5
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 1.4e-103 380.6 331 59.5
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 2.0e-102 376.7 323 60.1
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 2.6e-102 376.3 326 58.0
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.7e-101 373.6 334 58.1
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 7.9e-99 364.8 271 66.1
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.3e-96 357.5 297 61.6
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 2.6e-94 349.7 264 66.7
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 8.5e-93 344.7 258 64.0
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 1.2e-91 340.9 273 64.1
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 2.7e-91 339.7 283 62.2
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 1.0e-90 337.8 215 75.3
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 3.9e-90 335.9 218 73.9
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 8.8e-90 334.7 213 73.7
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 1.5e-84 317.4 299 56.5
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 4.8e-80 302.4 232 69.0
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 2.9e-77 293.1 547 36.2
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 5.0e-77 292.4 196 69.9
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 7.2e-76 288.5 219 67.1
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 1.2e-75 287.7 219 67.6
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.7e-75 286.6 283 52.7
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 6.8e-74 282.0 214 64.5
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 5.7e-73 278.9 213 64.3
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 2.0e-70 270.4 239 58.2
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 3.1e-63 246.5 329 45.9
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 1.6e-59 234.2 211 60.2
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 4.0e-42 176.4 257 40.5
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 8.6e-37 158.7 264 35.6
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 1.6e-30 137.9 290 34.5
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 3.4e-25 120.2 252 33.3
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 1.9e-23 114.4 83 73.5
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 2.1e-22 110.9 121 51.2
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 3.3e-20 103.6 100 59.0
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 7.3e-20 102.4 102 55.9
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 1.6e-19 101.3 129 45.0
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.6e-19 100.1 64 78.1
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.6e-19 100.1 64 76.6
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.6e-19 100.1 64 78.1
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 5.3e-18 96.3 94 55.3
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 9.0e-18 95.5 94 55.3
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.2e-17 95.1 64 71.9
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.2e-17 95.1 64 71.9
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.2e-17 95.1 64 71.9
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.5e-17 93.2 64 70.3
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 5.6e-12 76.3 167 32.3
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 4.8e-11 73.2 48 72.9
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 4.8e-11 73.2 233 27.5
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 4.8e-11 73.2 156 35.9
CARHR054100 Cardamine hirsuta HOM05D004930 ORTHO05D006531 8.1e-11 72.4 57 64.9
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 9.9e-09 65.5 170 30.6
Cre10.g431350 Chlamydomonas reinhardtii HOM05D039848 ORTHO05D028745 8.4e-08 62.4 161 29.8
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 9.3e-07 58.9 186 30.6


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