Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t36277H Brassica oleracea HOM05D009173 ORTHO05D027589 2.4e-213 745.3 402 100.0
C06p11380 Brassica napus HOM05D009173 ORTHO05D027589 1.5e-159 566.6 344 91.6
BcaC08g43766 Brassica carinata HOM05D009173 ORTHO05D027589 1.9e-82 310.5 150 100.0
BcaC08g43767 Brassica carinata HOM05D009173 ORTHO05D000309 4.0e-43 179.9 142 65.5
C06p04030 Brassica napus HOM05D012943 ORTHO05D039056 8.8e-35 152.1 76 88.2
BcaB07g33163 Brassica carinata HOM05D012943 ORTHO05D027589 1.8e-32 144.4 93 74.2
BcaC01g02038 Brassica carinata HOM05D009173 ORTHO05D000309 1.8e-32 144.4 84 76.2
BolC3t19182H Brassica oleracea HOM05D009173 ORTHO05D000309 1.8e-32 144.4 84 76.2
BolC7t41302H Brassica oleracea HOM05D009173 ORTHO05D000309 1.2e-31 141.7 141 54.6
BcaC08g43129 Brassica carinata HOM05D012943 ORTHO05D039056 8.9e-27 125.6 69 79.7
C03p68610 Brassica napus HOM05D000675 ORTHO05D000395 2.6e-26 124.0 105 61.9
BcaB01g01569 Brassica carinata HOM05D009173 ORTHO05D000309 1.1e-24 118.6 87 59.8
BcaC08g43001 Brassica carinata HOM05D009173 ORTHO05D000309 7.0e-24 115.9 141 48.2
C03p64920 Brassica napus HOM05D000675 ORTHO05D000395 1.6e-23 114.8 68 82.4
BcaC08g43768 Brassica carinata HOM05D001498 ORTHO05D008559 5.9e-23 112.8 59 100.0
BolC3t19120H Brassica oleracea HOM05D000675 ORTHO05D000395 2.8e-20 104.0 91 60.4
BcaC01g02366 Brassica carinata HOM05D009173 ORTHO05D000309 6.2e-20 102.8 145 42.1
BolC3t18879H Brassica oleracea HOM05D009173 ORTHO05D000309 6.2e-20 102.8 145 42.1
BraA09t38926Z Brassica rapa HOM05D009173 ORTHO05D000309 1.3e-17 95.1 139 38.8
BcaC07g38082 Brassica carinata HOM05D009173 ORTHO05D000309 4.9e-17 93.2 81 45.7
BcaC04g23317 Brassica carinata HOM05D009173 ORTHO05D000309 6.4e-17 92.8 91 46.2
Sp5g12640 Schrenkiella parvula HOM05D009173 ORTHO05D000309 1.4e-16 91.7 145 39.3
Sp5g10600 Schrenkiella parvula HOM05D009173 ORTHO05D000309 7.8e-15 85.9 145 37.9
Sp5g18110 Schrenkiella parvula HOM05D009173 ORTHO05D000309 7.8e-15 85.9 145 38.6
BolC6t35536H Brassica oleracea HOM05D000675 ORTHO05D000395 6.6e-14 82.8 48 85.4
BcaC01g02494 Brassica carinata HOM05D009173 ORTHO05D000309 1.1e-13 82.0 135 34.8
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 1.2e-12 78.6 85 43.5
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 1.2e-12 78.6 85 43.5
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 1.2e-12 78.6 85 43.5
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 8.1e-12 75.9 79 44.3
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 8.1e-12 75.9 79 44.3
AL4G18060 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 3.1e-11 73.9 145 38.6
BcaB03g15391 Brassica carinata HOM05D009173 ORTHO05D000309 3.1e-11 73.9 146 35.6
BcaC07g37924 Brassica carinata HOM05D001498 ORTHO05D008559 3.1e-11 73.9 54 68.5
AL1G56990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 4.0e-11 73.6 145 38.6
BcaB02g10767 Brassica carinata HOM05D001498 ORTHO05D008559 5.2e-11 73.2 58 67.2
AL6G38890 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 1.2e-10 72.0 142 33.1
BcaC04g20542 Brassica carinata HOM05D002776 ORTHO05D012331 1.2e-10 72.0 55 69.1
BcaC05g27664 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-10 72.0 59 66.1
BcaC06g35066 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-10 72.0 55 69.1
BolC9t57109H Brassica oleracea HOM05D001498 ORTHO05D008559 1.2e-10 72.0 55 69.1
BcaC06g35526 Brassica carinata HOM05D002776 ORTHO05D012331 2.0e-10 71.2 56 67.9
BcaC06g36228 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-10 71.2 67 59.7
BcaB03g16072 Brassica carinata HOM05D009173 ORTHO05D000309 3.4e-10 70.5 40 70.0
AL5G24470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 4.4e-10 70.1 124 37.1
BolC1t03832H Brassica oleracea HOM05D001498 ORTHO05D008559 5.8e-10 69.7 55 67.3
AL3G40990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 7.5e-10 69.3 133 35.3
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-09 68.6 79 41.8
C07p11390 Brassica napus HOM05D001498 ORTHO05D008559 1.3e-09 68.6 53 66.0
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-09 68.2 84 39.3
AL6G49470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.2e-09 67.8 133 35.3
BolC7t40933H Brassica oleracea HOM05D001498 ORTHO05D008559 2.2e-09 67.8 55 65.5
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 2.9e-09 67.4 79 40.5
BcaC04g19842 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-09 67.4 61 57.4
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 3.7e-09 67.0 62 48.4
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 4.9e-09 66.6 73 42.5
AL2G19320 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 8.3e-09 65.9 75 45.3
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 8.3e-09 65.9 79 38.0
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-08 65.5 79 39.2
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-08 65.5 79 39.2
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-08 65.5 79 39.2
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-08 65.5 79 39.2
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-08 65.5 79 39.2
BcaB01g00830 Brassica carinata HOM05D008073 ORTHO05D000309 2.4e-08 64.3 134 35.1
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-08 64.3 73 41.1
BcaC01g01872 Brassica carinata HOM05D001498 ORTHO05D008559 3.2e-08 63.9 65 55.4
BcaC05g25280 Brassica carinata HOM05D008073 ORTHO05D000309 3.2e-08 63.9 89 42.7
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 3.2e-08 63.9 84 36.9
BcaC04g20283 Brassica carinata HOM05D001498 ORTHO05D008559 4.1e-08 63.5 50 66.0
BolC9t57419H Brassica oleracea HOM05D001498 ORTHO05D008559 4.1e-08 63.5 50 66.0
BcaB01g02983 Brassica carinata HOM05D007774 ORTHO05D000309 7.1e-08 62.8 67 43.3
BolC7t41880H Brassica oleracea HOM05D008073 ORTHO05D000309 7.1e-08 62.8 67 41.8
BcaB03g13887 Brassica carinata HOM05D002776 ORTHO05D000038 9.2e-08 62.4 71 53.5
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-07 61.2 96 39.6
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-07 61.2 96 39.6
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-07 61.2 96 39.6
CARHR102990 Cardamine hirsuta HOM05D009173 ORTHO05D000309 2.1e-07 61.2 84 36.9
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-07 60.5 82 41.5
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-07 60.5 85 40.0
BcaC01g02040 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-07 60.5 40 70.0
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 4.6e-07 60.1 79 38.0
BcaB05g25086 Brassica carinata HOM05D008073 ORTHO05D000309 6.0e-07 59.7 73 41.1
BcaB06g26728 Brassica carinata HOM05D001498 ORTHO05D008559 6.0e-07 59.7 55 58.2
BcaB06g26984 Brassica carinata HOM05D008073 ORTHO05D000309 6.0e-07 59.7 73 41.1
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 6.0e-07 59.7 122 32.8
BcaB03g15638 Brassica carinata HOM05D008073 ORTHO05D000309 7.8e-07 59.3 131 29.8
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 7.8e-07 59.3 88 38.6
BcaB04g18490 Brassica carinata HOM05D001498 ORTHO05D008559 7.8e-07 59.3 66 51.5
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 7.8e-07 59.3 73 39.7
BcaC06g35618 Brassica carinata HOM05D001498 ORTHO05D095565 1.0e-06 58.9 54 59.3
BcaB04g19293 Brassica carinata HOM05D008073 ORTHO05D000309 1.3e-06 58.5 134 34.3
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-06 58.5 88 38.6
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-06 58.5 73 37.0
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 1.3e-06 58.5 89 37.1
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-06 58.2 98 34.7
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-06 58.2 90 36.7
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-06 58.2 71 39.4
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 2.3e-06 57.8 73 41.1
AT1G67235 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 3.0e-06 57.4 74 40.5
BcaB01g03186 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-06 57.4 55 56.4
BcaB03g16805 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-06 57.4 55 56.4
BcaB05g23076 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-06 57.4 55 56.4
BcaB05g23121 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-06 57.4 55 56.4
BcaB07g33755 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-06 57.4 55 56.4
BcaC07g37763 Brassica carinata HOM05D008073 ORTHO05D000309 3.0e-06 57.4 84 39.3
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 3.0e-06 57.4 86 32.6
BolC8t48149H Brassica oleracea HOM05D008073 ORTHO05D000309 3.0e-06 57.4 84 39.3
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 3.0e-06 57.4 73 39.7
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 3.9e-06 57.0 66 45.5
BcaC06g36328 Brassica carinata HOM05D001498 ORTHO05D039709 3.9e-06 57.0 45 64.4
EL10As8g23853 Beta vulgaris HOM05D008388 ORTHO05D000309 5.1e-06 56.6 76 35.5
BcaB04g17975 Brassica carinata HOM05D001498 ORTHO05D008559 5.1e-06 56.6 55 56.4
BcaB06g26316 Brassica carinata HOM05D001498 ORTHO05D008559 5.1e-06 56.6 55 56.4
BcaB06g26679 Brassica carinata HOM05D001498 ORTHO05D008559 5.1e-06 56.6 55 56.4
BcaC05g26788 Brassica carinata HOM05D001498 ORTHO05D008559 5.1e-06 56.6 55 56.4
CARHR292260 Cardamine hirsuta HOM05D008073 ORTHO05D000309 5.1e-06 56.6 88 38.6
EL10Ac7g16399 Beta vulgaris HOM05D008388 ORTHO05D000309 6.6e-06 56.2 76 35.5
BcaB02g11208 Brassica carinata HOM05D007774 ORTHO05D000309 6.6e-06 56.2 79 35.4
BcaB07g33942 Brassica carinata HOM05D001498 ORTHO05D008559 6.6e-06 56.2 55 54.5
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 6.6e-06 56.2 86 33.7
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 6.6e-06 56.2 66 43.9
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 6.6e-06 56.2 86 33.7
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 8.6e-06 55.8 76 36.8
EL10Ac2g03965 Beta vulgaris HOM05D008388 ORTHO05D000309 8.6e-06 55.8 77 36.4
BcaB06g26482 Brassica carinata HOM05D001498 ORTHO05D008559 8.6e-06 55.8 55 54.5
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 8.6e-06 55.8 73 38.4
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 8.6e-06 55.8 42 59.5
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 8.6e-06 55.8 42 59.5
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 8.6e-06 55.8 42 59.5
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 8.6e-06 55.8 42 59.5
C07p05330 Brassica napus HOM05D001498 ORTHO05D039709 8.6e-06 55.8 45 64.4
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 8.6e-06 55.8 42 59.5
BolC7t41165H Brassica oleracea HOM05D007774 ORTHO05D000309 8.6e-06 55.8 86 31.4


User provided reference genes

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