Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t36083H Brassica oleracea HOM05D013042 ORTHO05D016769 1.4e-69 266.2 132 100.0
BolC6t35805H Brassica oleracea HOM05D013042 ORTHO05D016769 1.9e-47 192.6 114 87.7
BolC8t52414H Brassica oleracea HOM05D013042 ORTHO05D016769 9.0e-45 183.7 132 76.5
C06p10090 Brassica napus HOM05D013042 ORTHO05D016769 7.6e-44 180.6 132 73.5
C06p07150 Brassica napus HOM05D013042 ORTHO05D016769 1.9e-31 139.4 77 92.2
BcaC08g44421 Brassica carinata HOM05D013042 ORTHO05D016769 9.4e-26 120.6 80 73.8
A09p59010 Brassica napus HOM05D013042 ORTHO05D016769 5.1e-24 114.8 63 88.9
A09p55120 Brassica napus HOM05D013042 ORTHO05D016769 6.9e-21 104.4 66 81.8
BraA09t36011Z Brassica rapa HOM05D013042 ORTHO05D016769 6.9e-21 104.4 66 81.8
BraA09t40919Z Brassica rapa HOM05D013042 ORTHO05D016769 3.8e-19 98.6 54 90.7
Carub.0003s1889 Capsella rubella HOM05D000003 ORTHO05D000283 2.6e-15 85.9 98 42.9
AT1G60720 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 7.4e-15 84.3 98 42.9
BraA10t42619Z Brassica rapa HOM05D000003 ORTHO05D000283 1.7e-14 83.2 98 42.9
BcaC07g39463 Brassica carinata HOM05D000003 ORTHO05D000283 1.8e-13 79.7 90 42.2
Carub.0007s2613 Capsella rubella HOM05D013042 ORTHO05D000283 5.3e-13 78.2 79 43.0
BolC3t21045H Brassica oleracea HOM05D000003 ORTHO05D000283 1.2e-12 77.0 89 39.3
BolC2t11113H Brassica oleracea HOM05D000003 ORTHO05D000283 2.2e-11 72.8 89 36.0
BraA05t21426Z Brassica rapa HOM05D000003 ORTHO05D000283 2.2e-11 72.8 82 42.7
BraA09t39368Z Brassica rapa HOM05D000003 ORTHO05D000283 2.2e-11 72.8 97 37.1
C02p50310 Brassica napus HOM05D000003 ORTHO05D000283 3.8e-11 72.0 89 36.0
BolC1t04817H Brassica oleracea HOM05D000003 ORTHO05D000283 3.8e-11 72.0 84 40.5
Carub.0004s0983 Capsella rubella HOM05D000003 ORTHO05D000283 3.8e-11 72.0 86 39.5
BraA01t03611Z Brassica rapa HOM05D000003 ORTHO05D000283 5.0e-11 71.6 95 35.8
BolC5t32455H Brassica oleracea HOM05D000003 ORTHO05D000283 6.5e-11 71.2 84 38.1
BolC8t49686H Brassica oleracea HOM05D000003 ORTHO05D000283 6.5e-11 71.2 94 37.2
BcaB03g14515 Brassica carinata HOM05D000003 ORTHO05D000283 1.9e-10 69.7 92 34.8
BraA03t14881Z Brassica rapa HOM05D000003 ORTHO05D000283 2.5e-10 69.3 90 33.3
BraA09t39919Z Brassica rapa HOM05D000003 ORTHO05D000283 2.5e-10 69.3 89 37.1
BolC5t31110H Brassica oleracea HOM05D000003 ORTHO05D000283 3.2e-10 68.9 90 34.4
BraA04t15908Z Brassica rapa HOM05D000003 ORTHO05D000283 3.2e-10 68.9 90 35.6
BraA06t24482Z Brassica rapa HOM05D000003 ORTHO05D000283 3.2e-10 68.9 89 36.0
BraA07t28678Z Brassica rapa HOM05D000003 ORTHO05D000283 3.2e-10 68.9 100 36.0
BolC1t05746H Brassica oleracea HOM05D000003 ORTHO05D000283 4.2e-10 68.6 90 36.7
A09p35340 Brassica napus HOM05D000003 ORTHO05D000283 5.5e-10 68.2 89 34.8
BolC1t01934H Brassica oleracea HOM05D000003 ORTHO05D000283 5.5e-10 68.2 97 36.1
BraA01t02789Z Brassica rapa HOM05D000003 ORTHO05D000283 5.5e-10 68.2 98 32.7
BraA08t32451Z Brassica rapa HOM05D000003 ORTHO05D000283 7.2e-10 67.8 89 37.1
BcaC03g16041 Brassica carinata HOM05D000003 ORTHO05D000283 9.4e-10 67.4 66 42.4
BolC6t37189H Brassica oleracea HOM05D000003 ORTHO05D000283 9.4e-10 67.4 90 38.9
BcaC05g27538 Brassica carinata HOM05D000003 ORTHO05D000283 2.1e-09 66.2 92 34.8
BolC9t55991H Brassica oleracea HOM05D000003 ORTHO05D000283 2.1e-09 66.2 94 36.2
BolC3t17965H Brassica oleracea HOM05D000003 ORTHO05D000283 2.7e-09 65.9 98 33.7
BolC5t30600H Brassica oleracea HOM05D000003 ORTHO05D000283 3.6e-09 65.5 90 32.2
BolC5t31117H Brassica oleracea HOM05D000003 ORTHO05D000283 3.6e-09 65.5 92 34.8
BolC5t33234H Brassica oleracea HOM05D000003 ORTHO05D000283 4.7e-09 65.1 84 35.7
BcaC03g15259 Brassica carinata HOM05D000003 ORTHO05D000283 6.1e-09 64.7 74 40.5
BolC1t04682H Brassica oleracea HOM05D000003 ORTHO05D000283 6.1e-09 64.7 87 33.3
BcaB04g19379 Brassica carinata HOM05D000003 ORTHO05D000283 8.0e-09 64.3 93 34.4
BolC1t01479H Brassica oleracea HOM05D000003 ORTHO05D000283 1.0e-08 63.9 89 36.0
AT4G10613 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 1.4e-08 63.5 94 34.0
BraA05t19597Z Brassica rapa HOM05D000003 ORTHO05D000283 1.8e-08 63.2 87 32.2
Carub.0002s0384 Capsella rubella HOM05D000003 ORTHO05D000283 1.8e-08 63.2 108 30.6
Carub.0005s0878 Capsella rubella HOM05D000003 ORTHO05D000283 1.8e-08 63.2 71 43.7
BcaB04g17131 Brassica carinata HOM05D000003 ORTHO05D000283 3.0e-08 62.4 66 40.9
BcaC08g42995 Brassica carinata HOM05D000003 ORTHO05D000283 3.0e-08 62.4 92 29.3
BcaNung02576 Brassica carinata HOM05D000003 ORTHO05D000283 4.0e-08 62.0 74 39.2
BraA09t41156Z Brassica rapa HOM05D000003 ORTHO05D000283 5.2e-08 61.6 89 31.5
BcaC05g28427 Brassica carinata HOM05D000003 ORTHO05D000283 6.7e-08 61.2 84 34.5
BcaC01g04931 Brassica carinata HOM05D000003 ORTHO05D000283 8.8e-08 60.8 92 31.5
BolC3t15540H Brassica oleracea HOM05D000003 ORTHO05D000283 8.8e-08 60.8 92 31.5
BolC9t58165H Brassica oleracea HOM05D000003 ORTHO05D000283 8.8e-08 60.8 97 28.9
BraA05t20748Z Brassica rapa HOM05D000003 ORTHO05D000283 1.2e-07 60.5 74 39.2
AT1G33710 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 1.5e-07 60.1 98 28.6
AT2G19146 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 2.0e-07 59.7 73 41.1
BolC1t02421H Brassica oleracea HOM05D000003 ORTHO05D000283 2.6e-07 59.3 79 30.4
A02p35830 Brassica napus HOM05D002495 ORTHO05D002704 4.4e-07 58.5 69 40.6
BraA02t08584Z Brassica rapa HOM05D002495 ORTHO05D002704 4.4e-07 58.5 69 40.6
BolC2t10393H Brassica oleracea HOM05D000003 ORTHO05D000283 5.7e-07 58.2 97 32.0
BcaC07g40370 Brassica carinata HOM05D000003 ORTHO05D000283 7.5e-07 57.8 66 33.3
BraA01t01070Z Brassica rapa HOM05D000003 ORTHO05D000283 9.7e-07 57.4 90 32.2
AL364U10020 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 1.3e-06 57.0 65 35.4
BolC6t37916H Brassica oleracea HOM05D000003 ORTHO05D000283 1.7e-06 56.6 82 31.7
BolC8t50980H Brassica oleracea HOM05D000003 ORTHO05D000283 2.2e-06 56.2 79 32.9
BcaB08g35764 Brassica carinata HOM05D000003 ORTHO05D000283 2.8e-06 55.8 89 29.2
BolC3t19601H Brassica oleracea HOM05D000003 ORTHO05D000283 4.8e-06 55.1 97 30.9
BolC7t42241H Brassica oleracea HOM05D000003 ORTHO05D000283 4.8e-06 55.1 48 52.1
BcaB08g36266 Brassica carinata HOM05D000003 ORTHO05D000283 6.3e-06 54.7 89 31.5
BolC8t46826H Brassica oleracea HOM05D000003 ORTHO05D000283 6.3e-06 54.7 90 31.1
BolC8t51615H Brassica oleracea HOM05D000003 ORTHO05D000283 6.3e-06 54.7 90 31.1
BraA08t33931Z Brassica rapa HOM05D000003 ORTHO05D000283 6.3e-06 54.7 89 30.3


User provided reference genes

Program Settings