Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p09890 Brassica napus HOM05D000198 ORTHO05D032538 4.9e-111 404.4 200 100.0
BolC6t36060H Brassica oleracea HOM05D000198 ORTHO05D032538 4.9e-111 404.4 200 100.0
BcaB04g17029 Brassica carinata HOM05D000198 ORTHO05D005959 9.2e-41 171.0 111 81.1
BcaC08g43591 Brassica carinata HOM05D000198 ORTHO05D032538 1.2e-40 170.6 85 100.0
Sp1g40550 Schrenkiella parvula HOM05D000198 ORTHO05D005959 1.2e-40 170.6 111 80.2
A08p01230 Brassica napus HOM05D000198 ORTHO05D005959 3.5e-40 169.1 116 77.6
BraA08t32174Z Brassica rapa HOM05D000198 ORTHO05D005959 3.5e-40 169.1 116 77.6
CARHR044440 Cardamine hirsuta HOM05D000198 ORTHO05D005959 7.8e-40 167.9 111 80.2
Thhalv10011405m.g Eutrema salsugineum HOM05D000198 ORTHO05D005959 7.8e-40 167.9 111 79.3
AT1G54100 Arabidopsis thaliana HOM05D000198 ORTHO05D005959 1.0e-39 167.5 111 78.4
BcaC01g01433 Brassica carinata HOM05D000198 ORTHO05D005959 1.3e-39 167.2 111 78.4
Carub.0001s4334 Capsella rubella HOM05D000198 ORTHO05D005959 2.3e-39 166.4 111 78.4
AL1G62810 Arabidopsis lyrata HOM05D000198 ORTHO05D005959 2.9e-39 166.0 111 77.5
C03p91970 Brassica napus HOM05D000198 ORTHO05D005959 1.2e-37 160.6 113 76.1
BolC3t21517H Brassica oleracea HOM05D000198 ORTHO05D005959 1.2e-37 160.6 113 76.1
THA.LOC104815620 Tarenaya hassleriana HOM05D000198 ORTHO05D005959 4.4e-35 152.1 111 72.1
TWI14G1137 Tripterygium wilfordii HOM05D000198 ORTHO05D005959 3.7e-34 149.1 111 70.3
EL10Ac7g16425 Beta vulgaris HOM05D000198 ORTHO05D005959 3.2e-33 146.0 111 71.2
Manes.11G017800 Manihot esculenta HOM05D000198 ORTHO05D005959 3.2e-33 146.0 111 68.5
Manes.11G017900 Manihot esculenta HOM05D000198 ORTHO05D005959 3.2e-33 146.0 111 68.5
Manes.11G018400 Manihot esculenta HOM05D000198 ORTHO05D005959 3.2e-33 146.0 111 68.5
Ciclev10025411m.g Citrus clementina HOM05D000198 ORTHO05D005959 4.1e-33 145.6 111 69.4
Eucgr.F04402 Eucalyptus grandis HOM05D000198 ORTHO05D005959 4.1e-33 145.6 111 70.3
Aa31LG8G1290 Aethionema arabicum HOM05D000198 ORTHO05D005959 5.4e-33 145.2 106 72.6
Ah.08g216940 Amaranthus hybridus HOM05D000198 ORTHO05D005959 7.0e-33 144.8 111 70.3
Nn8g38614 Nelumbo nucifera HOM05D000198 ORTHO05D005959 9.2e-33 144.4 111 70.3
A06p00550 Brassica napus HOM05D000198 ORTHO05D005959 1.6e-32 143.7 114 68.4
BraA06t23269Z Brassica rapa HOM05D000198 ORTHO05D005959 1.6e-32 143.7 114 68.4
Manes.04G146300 Manihot esculenta HOM05D000198 ORTHO05D005959 1.6e-32 143.7 111 68.5
AUR62009904 Chenopodium quinoa HOM05D000198 ORTHO05D005959 2.0e-32 143.3 111 69.4
Potri.003G067700 Populus trichocarpa HOM05D000198 ORTHO05D005959 2.0e-32 143.3 111 68.5
Solyc03g122310.4 Solanum lycopersicum HOM05D000198 ORTHO05D005959 2.0e-32 143.3 111 68.5
CsaV3_7G034360 Cucumis sativus L. HOM05D000198 ORTHO05D005959 2.7e-32 142.9 111 68.5
AUR62001464 Chenopodium quinoa HOM05D000198 ORTHO05D005959 3.5e-32 142.5 111 68.5
Gohir.D06G149800 Gossypium hirsutum HOM05D000198 ORTHO05D005959 6.0e-32 141.7 111 69.4
Gorai.010G174800 Gossypium raimondii HOM05D000198 ORTHO05D005959 6.0e-32 141.7 111 69.4
Sopen03g041040 Solanum pennellii HOM05D000198 ORTHO05D005959 6.0e-32 141.7 111 67.6
Atru.chr1.4039 Acer truncatum HOM05D000198 ORTHO05D005959 7.8e-32 141.4 111 67.6
PGSC0003DMG400022885 Solanum tuberosum HOM05D000198 ORTHO05D005959 7.8e-32 141.4 111 67.6
Cc00_g19070 Coffea canephora HOM05D000198 ORTHO05D005959 1.0e-31 141.0 111 68.5
Duzib235G0296 Durio zibethinus HOM05D000198 ORTHO05D005959 1.0e-31 141.0 111 68.5
Hma1.2p1_0291F.1_g114920 Hydrangea macrophylla HOM05D000198 ORTHO05D005959 1.0e-31 141.0 111 66.7
Sc12g0010670 Simmondsia chinensis HOM05D000198 ORTHO05D005959 1.0e-31 141.0 111 67.6
CSS0046920 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D005959 1.3e-31 140.6 111 68.5
Duzib192G0568 Durio zibethinus HOM05D000198 ORTHO05D005959 1.3e-31 140.6 111 69.4
Thecc.06G122600 Theobroma cacao HOM05D000198 ORTHO05D005959 1.3e-31 140.6 111 67.6
MBI13_g35420_MAGBIO Magnolia biondii HOM05D000198 ORTHO05D005959 1.7e-31 140.2 106 67.9
Peaxi162Scf00038g02031 Petunia axillaris HOM05D000198 ORTHO05D005959 1.7e-31 140.2 111 66.7
Prupe.7G196700 Prunus persica HOM05D000198 ORTHO05D005959 1.7e-31 140.2 111 65.8
ECA234G3205 Erigeron canadensis HOM05D000198 ORTHO05D005959 2.3e-31 139.8 111 65.8
COL.COLO4_30736 Corchorus olitorius HOM05D000198 ORTHO05D005959 3.0e-31 139.4 111 67.6
CAN.G862.50 Capsicum annuum HOM05D000198 ORTHO05D005959 3.9e-31 139.0 111 66.7
HanXRQChr10g0312481 Helianthus annuus HOM05D000198 ORTHO05D005959 5.0e-31 138.7 111 65.8
Ca_02187_v3 Cicer arietinum L. HOM05D000198 ORTHO05D005959 6.6e-31 138.3 112 65.2
Lalb_Chr11g0074241 Lupinus albus HOM05D000198 ORTHO05D005959 6.6e-31 138.3 112 64.3
Nitab4.5_0005225g0020 Nicotiana tabacum HOM05D000198 ORTHO05D005959 6.6e-31 138.3 111 66.7
Cpa.g.sc25.134 Carica papaya HOM05D000198 ORTHO05D005959 8.6e-31 137.9 111 64.9
Lalb_Chr11g0074221 Lupinus albus HOM05D000198 ORTHO05D005959 8.6e-31 137.9 112 64.3
Hund18683 Selenicereus undatus HOM05D000198 ORTHO05D005959 8.6e-31 137.9 111 66.7
Cfa002976 Carpinus fangiana HOM05D000198 ORTHO05D005959 1.1e-30 137.5 117 62.4
SalBow6G2826 Salvia bowleyana HOM05D000198 ORTHO05D005959 1.1e-30 137.5 111 65.8
SalBow6G5793 Salvia bowleyana HOM05D000198 ORTHO05D005959 1.1e-30 137.5 111 65.8
DCAR_022687 Daucus carota HOM05D000198 ORTHO05D005959 1.5e-30 137.1 118 63.6
MD02G1094300 Malus domestica HOM05D000198 ORTHO05D005959 1.5e-30 137.1 112 62.5
Oeu057874.2 Olea europaea HOM05D000198 ORTHO05D005959 1.5e-30 137.1 111 66.7
Lsat_1_v5_gn_5_136600 Lactuca sativa HOM05D000198 ORTHO05D005959 1.9e-30 136.7 111 64.0
Nitab4.5_0002898g0050 Nicotiana tabacum HOM05D000198 ORTHO05D005959 1.9e-30 136.7 111 66.7
Potri.001G167100 Populus trichocarpa HOM05D000198 ORTHO05D005959 1.9e-30 136.7 111 65.8
PGR119G2520 Punica granatum HOM05D000198 ORTHO05D005959 1.9e-30 136.7 111 65.8
CANSAT56G2536 Cannabis sativa HOM05D000198 ORTHO05D005959 4.3e-30 135.6 111 64.0
CDE11G1141 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 5.6e-30 135.2 111 65.8
COL.COLO4_18083 Corchorus olitorius HOM05D000198 ORTHO05D005959 5.6e-30 135.2 111 61.3
Haze_26026 Corylus avellana HOM05D000198 ORTHO05D005959 5.6e-30 135.2 117 61.5
Rhsim12G0210700 Rhododendron simsii HOM05D000198 ORTHO05D005959 5.6e-30 135.2 111 65.8
Rhsim12G0211100 Rhododendron simsii HOM05D000198 ORTHO05D005959 5.6e-30 135.2 111 65.8
TAR626G0433 Trochodendron aralioides HOM05D000198 ORTHO05D005959 5.6e-30 135.2 111 66.7
QL11p001049 Quercus lobata HOM05D000198 ORTHO05D005959 7.3e-30 134.8 117 59.8
Sed0020538 Sechium edule HOM05D000198 ORTHO05D005959 7.3e-30 134.8 111 63.1
vmacro22030 Vaccinium macrocarpon HOM05D000198 ORTHO05D005959 9.5e-30 134.4 111 64.0
HPP92_011368 Vanilla planifolia HOM05D000198 ORTHO05D005959 9.5e-30 134.4 111 64.9
Medtr2g042330 Medicago truncatula HOM05D000198 ORTHO05D005959 1.2e-29 134.0 112 62.5
CDE05G2779 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 1.6e-29 133.7 111 63.1
ClCG09G001060 Citrullus lanatus HOM05D000198 ORTHO05D005959 1.6e-29 133.7 138 55.1
Dinv20419 Davidia involucrata HOM05D000198 ORTHO05D005959 1.6e-29 133.7 111 65.8
PSO104G0161 Papaver somniferum HOM05D000198 ORTHO05D005959 1.6e-29 133.7 111 64.0
Phvul.009G226700 Phaseolus vulgaris HOM05D000198 ORTHO05D005959 1.6e-29 133.7 111 64.0
Aqoxy7G01026 Aquilegia oxysepala HOM05D000198 ORTHO05D005959 2.1e-29 133.3 111 64.0
MD15G1219200 Malus domestica HOM05D000198 ORTHO05D005959 2.1e-29 133.3 112 60.7
PSO421G0556 Papaver somniferum HOM05D000198 ORTHO05D005959 2.1e-29 133.3 111 64.0
Glyma.15G178400 Glycine max HOM05D000198 ORTHO05D005959 2.8e-29 132.9 111 63.1
ATR0598G121 Amborella trichopoda HOM05D000198 ORTHO05D005959 3.6e-29 132.5 111 63.1
CiPaw.03G204900 Carya illinoinensis HOM05D000198 ORTHO05D005959 3.6e-29 132.5 111 63.1
VMungo1309G2902 Vigna mungo HOM05D000198 ORTHO05D005959 4.7e-29 132.1 111 63.1
Psat1g134760 Pisum sativum HOM05D000198 ORTHO05D005959 8.0e-29 131.3 112 61.6
SEGI_07673 Sequoiadendron giganteum HOM05D000198 ORTHO05D005959 1.1e-28 131.0 111 62.2
Sabra01G0126300 Salix brachista HOM05D000198 ORTHO05D005959 1.4e-28 130.6 111 64.9
GSVIVG01015062001 Vitis vinifera HOM05D000198 ORTHO05D005959 1.4e-28 130.6 111 61.3
Migut.D00933 Erythranthe guttata HOM05D000198 ORTHO05D005959 3.1e-28 129.4 143 53.8
FvH4_1g08890 Fragaria vesca HOM05D000198 ORTHO05D005959 5.2e-28 128.6 112 58.9
Glyma.09G070300 Glycine max HOM05D000198 ORTHO05D005959 8.9e-28 127.9 111 61.3
Os09g0440300 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D005959 8.9e-28 127.9 111 62.2
Dinv37857 Davidia involucrata HOM05D000198 ORTHO05D005959 1.2e-27 127.5 171 49.1
Migut.I01090 Erythranthe guttata HOM05D000198 ORTHO05D005959 1.5e-27 127.1 111 59.5
Lj6g0012993 Lotus japonicus HOM05D000198 ORTHO05D005959 1.5e-27 127.1 111 60.4
MSTRG.9524 Avicennia marina HOM05D000198 ORTHO05D005959 2.0e-27 126.7 111 62.2
unitig_748.g7471 Utricularia gibba HOM05D000198 ORTHO05D005959 2.6e-27 126.3 111 60.4
Gohir.A06G144000 Gossypium hirsutum HOM05D000198 ORTHO05D005959 3.4e-27 125.9 90 73.3
RcHm_v2.0_Chr2g0095351 Rosa chinensis HOM05D000198 ORTHO05D005959 3.4e-27 125.9 111 58.6
Zm00001eb100180 Zea mays HOM05D000198 ORTHO05D005959 2.9e-26 122.9 107 61.7
HanXRQChr12g0360421 Helianthus annuus HOM05D000198 ORTHO05D005959 1.1e-25 120.9 110 60.9
FAN19G1784 Fragaria x ananassa HOM05D000198 ORTHO05D005959 6.0e-24 115.2 133 48.9
arahy.Tifrunner.gnm1.ann1.159H25 Arachis hypogaea HOM05D000198 ORTHO05D005959 1.3e-23 114.0 106 58.5
arahy.Tifrunner.gnm1.ann1.XD58IC Arachis hypogaea HOM05D000198 ORTHO05D005959 1.3e-23 114.0 106 58.5
Mapoly0118s0026 Marchantia polymorpha HOM05D000198 ORTHO05D005959 2.3e-23 113.2 111 55.0
Pp3c2_8090 Physcomitrium patens HOM05D000198 ORTHO05D005959 3.9e-23 112.5 111 53.2
Pp3c2_8099 Physcomitrium patens HOM05D000198 ORTHO05D005959 3.9e-23 112.5 111 53.2
SMO367G0849 Selaginella moellendorffii HOM05D000198 ORTHO05D005959 2.0e-19 100.1 114 50.0
TAR667G0005 Trochodendron aralioides HOM05D000198 ORTHO05D005959 2.1e-16 90.1 67 70.1
EL10Ac8g20167 Beta vulgaris HOM05D000198 ORTHO05D005959 3.5e-16 89.4 67 68.7
EL10Ac6g14251 Beta vulgaris HOM05D009807 ORTHO05D005959 1.0e-15 87.8 91 54.9
EL10Ac2g02629 Beta vulgaris HOM05D000198 ORTHO05D005959 1.1e-14 84.3 69 66.7
Haze_26480 Corylus avellana HOM05D000198 ORTHO05D005959 9.5e-14 81.3 116 43.1
GSVIVG01016734001 Vitis vinifera HOM05D000198 ORTHO05D005959 4.7e-13 79.0 122 42.6
MELO3C024345.2 Cucumis melo HOM05D000198 ORTHO05D005959 1.4e-12 77.4 106 46.2
Actinidia24721 Actinidia chinensis HOM05D000198 ORTHO05D005959 1.3e-10 70.9 190 33.2
AagrBONN_evm.TU.Sc2ySwM_344.2316 Anthoceros agrestis HOM05D000198 ORTHO05D005959 2.9e-10 69.7 67 52.2
BcaB07g33439 Brassica carinata HOM05D005801 ORTHO05D016715 4.9e-10 68.9 43 81.4
Ca_28801_v3 Cicer arietinum L. HOM05D000198 ORTHO05D148589 2.4e-09 66.6 109 33.0
Zm00001eb085560 Zea mays HOM05D000198 ORTHO05D005959 2.4e-09 66.6 102 38.2
Mapoly0062s0076 Marchantia polymorpha HOM05D002508 ORTHO05D011308 2.1e-08 63.5 105 37.1
Peaxi162Scf00546g00224 Petunia axillaris HOM05D000198 ORTHO05D022257 2.3e-07 60.1 92 38.0
Pp3c1_42020 Physcomitrium patens HOM05D000198 ORTHO05D011308 3.0e-07 59.7 105 35.2
Sabra03G0039600 Salix brachista HOM05D000198 ORTHO05D005959 3.9e-07 59.3 101 41.6
Pp3s32_470 Physcomitrium patens HOM05D000198 ORTHO05D013560 8.7e-07 58.2 110 33.6
Carub.0003s2482 Capsella rubella HOM05D000198 ORTHO05D000763 1.1e-06 57.8 92 37.0
CARHR100620 Cardamine hirsuta HOM05D000198 ORTHO05D000763 1.1e-06 57.8 92 37.0
CDE06G1493 Ceratophyllum demersum HOM05D000198 ORTHO05D000763 1.5e-06 57.4 134 31.3
FAN13G0689 Fragaria x ananassa HOM05D000198 ORTHO05D003365 1.5e-06 57.4 134 32.8
Peaxi162Scf00560g00223 Petunia axillaris HOM05D000198 ORTHO05D000763 1.5e-06 57.4 92 34.8
Aa31sc29G120 Aethionema arabicum HOM05D000198 ORTHO05D000763 1.9e-06 57.0 105 33.3
Cpa.g.sc23.113 Carica papaya HOM05D000198 ORTHO05D000763 1.9e-06 57.0 122 28.7
FAN04G2709 Fragaria x ananassa HOM05D000198 ORTHO05D003365 1.9e-06 57.0 134 33.6
Psat7g013880 Pisum sativum HOM05D000198 ORTHO05D000763 1.9e-06 57.0 92 37.0
CAN.G1710.2 Capsicum annuum HOM05D000198 ORTHO05D000763 2.5e-06 56.6 92 34.8
CiPaw.04G165900 Carya illinoinensis HOM05D000198 ORTHO05D000763 2.5e-06 56.6 111 29.7
Lj4g0004071 Lotus japonicus HOM05D000198 ORTHO05D003365 2.5e-06 56.6 112 33.9
Carub.0002s2171 Capsella rubella HOM05D000198 ORTHO05D003365 3.3e-06 56.2 115 33.0
Ca_21880_v3 Cicer arietinum L. HOM05D000198 ORTHO05D003365 3.3e-06 56.2 112 34.8
FvH4_5g16350 Fragaria vesca HOM05D000198 ORTHO05D003365 3.3e-06 56.2 134 32.8
FAN18G3532 Fragaria x ananassa HOM05D000198 ORTHO05D003365 3.3e-06 56.2 134 32.8
Lj5C35T2 Lonicera japonica HOM05D000198 ORTHO05D005959 3.3e-06 56.2 38 71.1
Migut.K00457 Erythranthe guttata HOM05D000198 ORTHO05D000763 4.3e-06 55.8 89 36.0
AT3G24503 Arabidopsis thaliana HOM05D000198 ORTHO05D000763 5.6e-06 55.5 92 34.8
BcaB03g14581 Brassica carinata HOM05D000198 ORTHO05D000763 5.6e-06 55.5 92 34.8
CANSAT80G1940 Cannabis sativa HOM05D000198 ORTHO05D003365 5.6e-06 55.5 115 34.8
FAN03G0818 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.6e-06 55.5 39 64.1
FAN23G1242 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.6e-06 55.5 39 66.7
FAN26G1556 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.6e-06 55.5 39 64.1
FAN26G2953 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.6e-06 55.5 39 64.1
FAN28G1454 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.6e-06 55.5 39 64.1
Nn4g22927 Nelumbo nucifera HOM05D000198 ORTHO05D003365 5.6e-06 55.5 131 31.3
SEGI_39471 Sequoiadendron giganteum HOM05D000198 ORTHO05D011308 5.6e-06 55.5 106 32.1
AL3G39980 Arabidopsis lyrata HOM05D000198 ORTHO05D000763 7.3e-06 55.1 92 34.8
CiPaw.04G165800 Carya illinoinensis HOM05D000198 ORTHO05D000763 7.3e-06 55.1 111 28.8
Hund20245 Selenicereus undatus HOM05D000198 ORTHO05D003365 7.3e-06 55.1 115 33.9
VMungo1215G3368 Vigna mungo HOM05D000198 ORTHO05D003365 7.3e-06 55.1 112 33.0
Thhalv10002492m.g Eutrema salsugineum HOM05D000198 ORTHO05D000763 9.6e-06 54.7 92 34.8
Glyma.05G033500 Glycine max HOM05D000198 ORTHO05D003365 9.6e-06 54.7 112 33.0
MD06G1181500 Malus domestica HOM05D000198 ORTHO05D003365 9.6e-06 54.7 112 33.0
Medtr4g106510 Medicago truncatula HOM05D000198 ORTHO05D003365 9.6e-06 54.7 115 33.9


User provided reference genes

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