Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t36015H Brassica oleracea HOM05D004482 ORTHO05D005212 1.4e-48 196.1 104 100.0
BolC4t26969H Brassica oleracea HOM05D004482 ORTHO05D005212 2.1e-44 182.2 98 96.9
C04p54180 Brassica napus HOM05D004482 ORTHO05D005212 3.9e-43 177.9 98 93.9
C08p00860 Brassica napus HOM05D004482 ORTHO05D005212 2.5e-42 175.3 99 94.9
BcaC08g43547 Brassica carinata HOM05D004482 ORTHO05D005212 4.5e-31 137.9 98 78.6
BcaC02g08439 Brassica carinata HOM05D004482 ORTHO05D005212 1.4e-29 132.9 98 75.5
AT2G32760 Arabidopsis thaliana HOM05D004482 ORTHO05D005212 3.1e-08 62.0 41 78.0
Sp4g15100 Schrenkiella parvula HOM05D004482 ORTHO05D005212 3.1e-08 62.0 41 78.0
A03p18310 Brassica napus HOM05D004482 ORTHO05D005212 4.1e-08 61.6 45 71.1
BolC3t14519H Brassica oleracea HOM05D004482 ORTHO05D005212 4.1e-08 61.6 45 71.1
Carub.0004s1412 Capsella rubella HOM05D004482 ORTHO05D005212 4.1e-08 61.6 41 75.6
Thhalv10016939m.g Eutrema salsugineum HOM05D004482 ORTHO05D005212 5.3e-08 61.2 38 81.6
CARHR126650 Cardamine hirsuta HOM05D004482 ORTHO05D005212 6.9e-08 60.8 38 81.6
BcaNung06790 Brassica carinata HOM05D004482 ORTHO05D005212 1.5e-07 59.7 45 68.9
C03p21360 Brassica napus HOM05D004482 ORTHO05D005212 1.5e-07 59.7 45 68.9
AL4G28200 Arabidopsis lyrata HOM05D004482 ORTHO05D005212 2.0e-07 59.3 41 73.2
BraA03t11091Z Brassica rapa HOM05D004482 ORTHO05D005212 2.0e-07 59.3 41 75.6
A04p25280 Brassica napus HOM05D004482 ORTHO05D005212 3.4e-07 58.5 41 70.7
C04p62340 Brassica napus HOM05D000474 ORTHO05D005212 3.4e-07 58.5 41 70.7
BraA04t18031Z Brassica rapa HOM05D004482 ORTHO05D005212 7.7e-07 57.4 41 68.3
BcaB06g28632 Brassica carinata HOM05D004482 ORTHO05D005212 1.3e-06 56.6 41 68.3
BcaC02g07886 Brassica carinata HOM05D004482 ORTHO05D005212 2.9e-06 55.5 41 68.3
BolC4t27707H Brassica oleracea HOM05D004482 ORTHO05D005212 2.9e-06 55.5 41 68.3
Aa31LG5G4410 Aethionema arabicum HOM05D004482 ORTHO05D005212 8.5e-06 53.9 41 65.9


User provided reference genes

Program Settings