Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 2.5e-268 928.3 512 100.0
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 1.3e-264 916.0 512 99.0
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 7.9e-246 853.6 512 94.3
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 8.7e-221 770.4 550 78.2
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.8e-218 762.7 550 77.8
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 7.5e-71 272.3 316 66.5
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 3.0e-64 250.4 330 55.2
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 3.0e-64 250.4 290 58.6
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 7.0e-61 239.2 296 56.1
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 7.0e-61 239.2 296 56.1
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 8.0e-57 225.7 260 55.4
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 8.9e-56 222.2 287 55.7
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 7.0e-53 212.6 151 74.8
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 6.6e-51 206.1 264 59.1
BcaB03g13247 Brassica carinata HOM05D007694 ORTHO05D007622 2.4e-45 187.6 299 53.2
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 3.0e-43 180.6 133 72.9
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 1.9e-42 177.9 387 42.6
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 5.6e-42 176.4 387 42.4
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 5.6e-42 176.4 387 42.4
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 4.7e-41 173.3 387 42.1
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 3.5e-36 157.1 434 34.1
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 4.6e-36 156.8 466 36.3
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 7.8e-36 156.0 153 59.5
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 6.6e-35 152.9 150 56.7
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 6.6e-35 152.9 153 58.8
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 8.6e-35 152.5 151 58.9
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 8.6e-35 152.5 151 58.9
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 8.6e-35 152.5 151 58.9
C07p27460 Brassica napus HOM05D007694 ORTHO05D019969 1.1e-34 152.1 100 77.0
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 1.5e-34 151.8 142 61.3
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 1.9e-34 151.4 150 56.0
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 1.9e-34 151.4 150 56.0
BolC7t43276H Brassica oleracea HOM05D007694 ORTHO05D019969 9.5e-34 149.1 100 76.0
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 1.6e-33 148.3 434 33.2
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 2.8e-33 147.5 151 58.3
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 6.2e-33 146.4 150 55.3
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 8.1e-33 146.0 150 54.7
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 1.1e-32 145.6 153 54.9
C03p13860 Brassica napus HOM05D007694 ORTHO05D019969 3.1e-32 144.1 100 74.0
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 4.0e-32 143.7 118 67.8
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 1.2e-31 142.1 153 53.6
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 9.9e-31 139.0 140 57.9
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 1.3e-30 138.7 142 57.0
BraA09t39372Z Brassica rapa HOM05D007694 ORTHO05D018628 5.4e-29 133.3 130 57.7
A01p18710 Brassica napus HOM05D007694 ORTHO05D018628 1.2e-28 132.1 135 59.3
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 1.6e-28 131.7 148 52.0
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.6e-28 131.7 148 52.0
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 1.2e-25 122.1 148 52.7
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 1.2e-25 122.1 148 52.7
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 1.2e-23 115.5 150 47.3
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 5.8e-23 113.2 452 30.1
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 3.3e-18 97.4 195 47.2
BcaC02g10860 Brassica carinata HOM05D009681 ORTHO05D013235 9.6e-18 95.9 150 43.3
BcaC01g04122 Brassica carinata HOM05D009681 ORTHO05D013235 3.6e-17 94.0 148 43.9
C01p52730 Brassica napus HOM05D009681 ORTHO05D013235 3.6e-17 94.0 157 41.4
BcaC01g03734 Brassica carinata HOM05D009681 ORTHO05D013235 1.4e-16 92.0 152 42.1
BcaB01g05936 Brassica carinata HOM05D009681 ORTHO05D013235 1.8e-16 91.7 147 42.9
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 5.3e-16 90.1 58 75.9
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 5.3e-16 90.1 58 75.9
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 5.8e-15 86.7 354 38.1
BcaB03g15520 Brassica carinata HOM05D009681 ORTHO05D013235 9.9e-15 85.9 150 43.3
A02p13980 Brassica napus HOM05D007694 ORTHO05D098099 9.9e-15 85.9 54 79.6
C03p14360 Brassica napus HOM05D009681 ORTHO05D013235 2.2e-14 84.7 148 40.5
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 1.1e-13 82.4 220 37.7
BcaC04g22727 Brassica carinata HOM05D009681 ORTHO05D013235 1.1e-13 82.4 160 38.8
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 1.8e-11 75.1 178 48.3
A09p45490 Brassica napus HOM05D009681 ORTHO05D013235 3.9e-11 73.9 137 40.9
C04p72940 Brassica napus HOM05D007694 ORTHO05D040685 3.9e-11 73.9 52 71.2
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 5.1e-11 73.6 134 44.8
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 1.1e-10 72.4 244 34.4
C03p44900 Brassica napus HOM05D009681 ORTHO05D013235 1.1e-10 72.4 124 40.3
BolC4t28328H Brassica oleracea HOM05D007694 ORTHO05D040685 1.1e-10 72.4 52 71.2
BraA09t40010Z Brassica rapa HOM05D009681 ORTHO05D013235 1.1e-10 72.4 137 40.1
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 1.5e-10 72.0 150 39.3
BraA07t28487Z Brassica rapa HOM05D006896 ORTHO05D007622 3.3e-10 70.9 71 60.6
BcaC04g22211 Brassica carinata HOM05D040530 ORTHO05D032573 4.3e-10 70.5 54 66.7
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 5.6e-10 70.1 108 45.4
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 5.6e-10 70.1 108 45.4
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 1.3e-09 68.9 152 40.1
C07p37270 Brassica napus HOM05D008960 ORTHO05D041838 2.8e-09 67.8 166 38.6
BolC7t44237H Brassica oleracea HOM05D008960 ORTHO05D041838 2.8e-09 67.8 166 38.6
BcaB03g13690 Brassica carinata HOM05D007694 ORTHO05D094466 3.7e-09 67.4 76 56.6
BcaC05g27972 Brassica carinata HOM05D007694 ORTHO05D039545 3.7e-09 67.4 70 57.1
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 1.1e-08 65.9 167 38.9
BcaNung03237 Brassica carinata HOM05D007694 ORTHO05D092031 2.4e-08 64.7 136 38.2
BcaB05g23971 Brassica carinata HOM05D007694 ORTHO05D092126 4.0e-08 63.9 55 63.6
C09p46020 Brassica napus HOM05D007694 ORTHO05D099111 4.0e-08 63.9 49 67.3
BcaC03g13094 Brassica carinata HOM05D012955 ORTHO05D013233 5.3e-08 63.5 94 42.6
A07p28910 Brassica napus HOM05D008960 ORTHO05D021621 6.9e-08 63.2 167 38.3
C06p25450 Brassica napus HOM05D009661 ORTHO05D020160 6.9e-08 63.2 210 34.8
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 6.9e-08 63.2 129 41.1
BraA07t30533Z Brassica rapa HOM05D008960 ORTHO05D021621 6.9e-08 63.2 167 38.3
BraA01t00165Z Brassica rapa HOM05D009832 ORTHO05D012823 1.2e-07 62.4 42 73.8
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 1.5e-07 62.0 123 41.5
BolC6t36831H Brassica oleracea HOM05D009832 ORTHO05D106286 2.6e-07 61.2 55 58.2
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 3.4e-07 60.8 123 40.7
C05p39740 Brassica napus HOM05D007694 ORTHO05D039545 3.4e-07 60.8 78 50.0
BcaC06g31833 Brassica carinata HOM05D007694 ORTHO05D012823 4.5e-07 60.5 54 59.3
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 4.5e-07 60.5 72 50.0
C07p10600 Brassica napus HOM05D006896 ORTHO05D007622 4.5e-07 60.5 150 34.0
BolC7t45494H Brassica oleracea HOM05D009832 ORTHO05D012823 5.8e-07 60.1 49 65.3
A09p41260 Brassica napus HOM05D016611 ORTHO05D099774 7.6e-07 59.7 53 64.2
C01p13390 Brassica napus HOM05D009832 ORTHO05D012823 7.6e-07 59.7 49 59.2
C06p16310 Brassica napus HOM05D009832 ORTHO05D032737 9.9e-07 59.3 55 56.4
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 1.3e-06 58.9 150 37.3
A10p16920 Brassica napus HOM05D000041 ORTHO05D000061 2.2e-06 58.2 44 72.7
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 2.9e-06 57.8 120 40.0
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 2.9e-06 57.8 120 40.0
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 4.9e-06 57.0 252 34.5
A09p60520 Brassica napus HOM05D010036 ORTHO05D102689 8.4e-06 56.2 173 34.7


User provided reference genes

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