Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p07460 Brassica napus HOM05D003870 ORTHO05D004567 8.4e-76 287.0 146 100.0
BolC6t35835H Brassica oleracea HOM05D003870 ORTHO05D004567 8.4e-76 287.0 146 100.0
A06p01960 Brassica napus HOM05D003870 ORTHO05D004567 9.2e-75 283.5 146 98.6
BraA06t23412Z Brassica rapa HOM05D003870 ORTHO05D004567 9.2e-75 283.5 146 98.6
Carub.0001s4120 Capsella rubella HOM05D003870 ORTHO05D004567 9.2e-75 283.5 146 97.9
BcaC01g01311 Brassica carinata HOM05D003870 ORTHO05D004567 3.9e-73 278.1 146 95.9
BcaC01g01313 Brassica carinata HOM05D003870 ORTHO05D004567 3.9e-73 278.1 146 95.9
Thhalv10011814m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 5.1e-73 277.7 146 96.6
C03p90500 Brassica napus HOM05D003870 ORTHO05D004567 6.6e-73 277.3 146 95.9
BolC3t21374H Brassica oleracea HOM05D003870 ORTHO05D004567 6.6e-73 277.3 146 95.9
AT1G52230 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 8.7e-73 276.9 146 95.9
A08p02270 Brassica napus HOM05D003870 ORTHO05D004567 8.7e-73 276.9 146 95.2
Sp1g38770 Schrenkiella parvula HOM05D003870 ORTHO05D004567 8.7e-73 276.9 146 95.2
BraA08t32272Z Brassica rapa HOM05D003870 ORTHO05D004567 1.5e-72 276.2 146 95.2
Aa31LG10G2680 Aethionema arabicum HOM05D003870 ORTHO05D004567 4.3e-72 274.6 146 95.2
CARHR042360 Cardamine hirsuta HOM05D003870 ORTHO05D004567 5.6e-72 274.2 146 95.2
Thhalv10021715m.g Eutrema salsugineum HOM05D003870 ORTHO05D004567 2.8e-71 271.9 146 93.8
BcaB04g17164 Brassica carinata HOM05D003870 ORTHO05D004567 4.0e-70 268.1 144 93.8
Sp3g14500 Schrenkiella parvula HOM05D003870 ORTHO05D004567 6.9e-70 267.3 146 91.8
BcaB04g18888 Brassica carinata HOM05D003870 ORTHO05D004567 9.0e-70 266.9 146 92.5
AL3G28820 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 4.4e-69 264.6 146 90.4
BcaC05g28907 Brassica carinata HOM05D003870 ORTHO05D004567 4.4e-69 264.6 146 91.8
C05p50360 Brassica napus HOM05D003870 ORTHO05D004567 4.4e-69 264.6 146 91.8
BolC5t33784H Brassica oleracea HOM05D003870 ORTHO05D004567 4.4e-69 264.6 146 91.8
Carub.0003s1588 Capsella rubella HOM05D003870 ORTHO05D004567 5.8e-69 264.2 146 90.4
BraA01t03856Z Brassica rapa HOM05D003870 ORTHO05D004567 9.9e-69 263.5 146 91.1
AT3G16140 Arabidopsis thaliana HOM05D003870 ORTHO05D004567 2.9e-68 261.9 146 89.7
A05p33360 Brassica napus HOM05D003870 ORTHO05D004567 3.8e-68 261.5 146 91.1
BraA05t22161Z Brassica rapa HOM05D003870 ORTHO05D004567 3.8e-68 261.5 146 91.1
A01p37960 Brassica napus HOM05D003870 ORTHO05D004567 6.4e-68 260.8 146 90.4
BcaB06g25707 Brassica carinata HOM05D003870 ORTHO05D004567 2.4e-67 258.8 146 90.4
CARHR091300 Cardamine hirsuta HOM05D003870 ORTHO05D004567 2.4e-67 258.8 146 88.4
THA.LOC104817982 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 7.8e-66 253.8 146 86.3
THA.LOC104810527 Tarenaya hassleriana HOM05D003870 ORTHO05D004567 1.7e-65 252.7 147 87.1
TWI12G1021 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 1.9e-64 249.2 146 84.9
Potri.003G052500 Populus trichocarpa HOM05D003870 ORTHO05D004567 4.8e-63 244.6 146 83.6
Cpa.g.sc1182.1 Carica papaya HOM05D003870 ORTHO05D004567 1.4e-62 243.0 146 82.2
Manes.11G038100 Manihot esculenta HOM05D003870 ORTHO05D004567 1.4e-62 243.0 146 82.2
COL.COLO4_30434 Corchorus olitorius HOM05D003870 ORTHO05D004567 3.1e-62 241.9 146 83.6
Manes.04G129900 Manihot esculenta HOM05D003870 ORTHO05D004567 1.5e-61 239.6 146 81.5
Thecc.06G092200 Theobroma cacao HOM05D003870 ORTHO05D004567 2.0e-61 239.2 146 82.2
Ciclev10026722m.g Citrus clementina HOM05D003870 ORTHO05D004567 3.4e-61 238.4 146 81.5
VMungo0331G0764 Vigna mungo HOM05D003870 ORTHO05D004567 3.4e-61 238.4 146 82.2
Dinv38024 Davidia involucrata HOM05D003870 ORTHO05D004567 4.5e-61 238.0 146 81.5
Eucgr.F03038 Eucalyptus grandis HOM05D003870 ORTHO05D004567 5.8e-61 237.7 145 80.0
PGR102G1204 Punica granatum HOM05D003870 ORTHO05D004567 5.8e-61 237.7 146 80.8
Sabra03G0026800 Salix brachista HOM05D003870 ORTHO05D004567 5.8e-61 237.7 146 81.5
CANSAT56G1465 Cannabis sativa HOM05D003870 ORTHO05D004567 7.6e-61 237.3 146 80.8
ClCG07G013150 Citrullus lanatus HOM05D003870 ORTHO05D004567 7.6e-61 237.3 146 81.5
MELO3C012971.2 Cucumis melo HOM05D003870 ORTHO05D004567 9.9e-61 236.9 146 81.5
CiPaw.01G235900 Carya illinoinensis HOM05D003870 ORTHO05D004567 1.7e-60 236.1 146 80.8
Gohir.A05G131700 Gossypium hirsutum HOM05D003870 ORTHO05D004567 1.7e-60 236.1 146 80.8
Nitab4.5_0000351g0060 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.2e-60 235.7 146 78.1
Cfa002093 Carpinus fangiana HOM05D003870 ORTHO05D004567 3.8e-60 235.0 146 80.1
Haze_16364 Corylus avellana HOM05D003870 ORTHO05D004567 3.8e-60 235.0 146 80.1
Nn2g11696 Nelumbo nucifera HOM05D003870 ORTHO05D004567 3.8e-60 235.0 146 80.8
CsaV3_3G025000 Cucumis sativus L. HOM05D003870 ORTHO05D004567 4.9e-60 234.6 146 80.8
Glyma.07G019700 Glycine max HOM05D003870 ORTHO05D004567 4.9e-60 234.6 146 80.8
Gohir.D05G131200 Gossypium hirsutum HOM05D003870 ORTHO05D004567 4.9e-60 234.6 146 79.5
Gorai.009G134900 Gossypium raimondii HOM05D003870 ORTHO05D004567 4.9e-60 234.6 146 79.5
Duzib235G0817 Durio zibethinus HOM05D003870 ORTHO05D004567 6.4e-60 234.2 146 80.1
Migut.D01017 Erythranthe guttata HOM05D003870 ORTHO05D004567 6.4e-60 234.2 146 80.1
Duzib160G0587 Durio zibethinus HOM05D003870 ORTHO05D004567 8.4e-60 233.8 146 80.1
Glyma.08G204800 Glycine max HOM05D003870 ORTHO05D004567 8.4e-60 233.8 146 80.8
AUR62011659 Chenopodium quinoa HOM05D003870 ORTHO05D004567 1.1e-59 233.4 146 80.1
DCAR_023061 Daucus carota HOM05D003870 ORTHO05D004567 1.1e-59 233.4 146 80.8
RcHm_v2.0_Chr2g0138931 Rosa chinensis HOM05D003870 ORTHO05D004567 1.1e-59 233.4 146 78.1
TWI75G1362 Tripterygium wilfordii HOM05D003870 ORTHO05D004567 1.1e-59 233.4 147 80.3
Migut.I00942 Erythranthe guttata HOM05D003870 ORTHO05D004567 1.9e-59 232.6 146 79.5
FAN05G2130 Fragaria x ananassa HOM05D003870 ORTHO05D004567 1.9e-59 232.6 146 78.1
Nitab4.5_0001315g0130 Nicotiana tabacum HOM05D003870 ORTHO05D004567 1.9e-59 232.6 146 77.4
QL05p021780 Quercus lobata HOM05D003870 ORTHO05D004567 1.9e-59 232.6 145 80.7
Sed0024359 Sechium edule HOM05D003870 ORTHO05D004567 1.9e-59 232.6 146 80.8
FAN14G2389 Fragaria x ananassa HOM05D003870 ORTHO05D004567 2.4e-59 232.3 146 78.1
Nitab4.5_0002859g0140 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.4e-59 232.3 146 78.1
Phvul.010G148800 Phaseolus vulgaris HOM05D003870 ORTHO05D004567 2.4e-59 232.3 146 80.1
MD09G1209500 Malus domestica HOM05D003870 ORTHO05D004567 3.2e-59 231.9 146 78.1
Nitab4.5_0018837g0020 Nicotiana tabacum HOM05D003870 ORTHO05D004567 3.2e-59 231.9 146 76.7
FAN02G0928 Fragaria x ananassa HOM05D003870 ORTHO05D004567 4.2e-59 231.5 146 78.1
Nn3g18073 Nelumbo nucifera HOM05D003870 ORTHO05D004567 4.2e-59 231.5 147 80.3
Ah.01g021620 Amaranthus hybridus HOM05D003870 ORTHO05D004567 5.4e-59 231.1 146 78.1
CAN.G1152.5 Capsicum annuum HOM05D003870 ORTHO05D004567 5.4e-59 231.1 146 76.7
Lsat_1_v5_gn_1_35241 Lactuca sativa HOM05D003870 ORTHO05D004567 5.4e-59 231.1 146 79.5
Sed0005638 Sechium edule HOM05D003870 ORTHO05D004567 5.4e-59 231.1 146 80.1
HanXRQChr12g0360771 Helianthus annuus HOM05D003870 ORTHO05D004567 7.1e-59 230.7 146 78.1
Aqoxy7G01609 Aquilegia oxysepala HOM05D003870 ORTHO05D004567 9.3e-59 230.3 146 78.1
CSS0035581 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 9.3e-59 230.3 146 80.1
PGSC0003DMG400016504 Solanum tuberosum HOM05D003870 ORTHO05D004567 9.3e-59 230.3 146 77.4
arahy.Tifrunner.gnm1.ann1.71HCYD Arachis hypogaea HOM05D003870 ORTHO05D004567 1.2e-58 229.9 146 79.5
arahy.Tifrunner.gnm1.ann1.YBSA05 Arachis hypogaea HOM05D003870 ORTHO05D004567 1.2e-58 229.9 146 79.5
EL10Ac9g22029 Beta vulgaris HOM05D003870 ORTHO05D004567 1.2e-58 229.9 146 78.1
Sopen06g024910 Solanum pennellii HOM05D003870 ORTHO05D004567 1.2e-58 229.9 146 77.4
Solyc06g066640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 1.6e-58 229.6 146 77.4
TAR383G0495 Trochodendron aralioides HOM05D003870 ORTHO05D004567 1.6e-58 229.6 146 80.1
ECA234G4669 Erigeron canadensis HOM05D003870 ORTHO05D004567 2.1e-58 229.2 146 78.8
FvH4_6g31740 Fragaria vesca HOM05D003870 ORTHO05D004567 2.1e-58 229.2 146 77.4
Hma1.2p1_1195F.1_g265780 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 2.1e-58 229.2 147 79.6
Hma1.2p1_3147F.1_g333153 Hydrangea macrophylla HOM05D003870 ORTHO05D004567 2.1e-58 229.2 147 79.6
Nitab4.5_0003418g0030 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.1e-58 229.2 146 77.4
PGSC0003DMG400002626 Solanum tuberosum HOM05D003870 ORTHO05D004567 2.1e-58 229.2 146 76.7
SGA_v2.0_scaffold5G02558 Striga asiatica HOM05D003870 ORTHO05D004567 2.1e-58 229.2 146 78.8
CSS0004601 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 2.7e-58 228.8 146 78.8
CSS0022866 Camellia sinensis var. sinensis HOM05D003870 ORTHO05D004567 2.7e-58 228.8 146 78.8
FAN09G1730 Fragaria x ananassa HOM05D003870 ORTHO05D004567 2.7e-58 228.8 146 76.7
Psat5g298080 Pisum sativum HOM05D003870 ORTHO05D004567 2.7e-58 228.8 147 78.2
Prupe.3G067400 Prunus persica HOM05D003870 ORTHO05D004567 2.7e-58 228.8 146 76.0
Peaxi162Scf00015g00032 Petunia axillaris HOM05D003870 ORTHO05D004567 6.0e-58 227.6 146 76.0
Cc04_g03050 Coffea canephora HOM05D003870 ORTHO05D004567 1.0e-57 226.9 146 79.5
Medtr2g101820 Medicago truncatula HOM05D003870 ORTHO05D004567 1.0e-57 226.9 148 77.7
TAR626G1423 Trochodendron aralioides HOM05D003870 ORTHO05D004567 1.3e-57 226.5 146 78.1
CAN.G438.27 Capsicum annuum HOM05D003870 ORTHO05D004567 1.8e-57 226.1 146 76.7
Lsat_1_v5_gn_5_130901 Lactuca sativa HOM05D003870 ORTHO05D004567 1.8e-57 226.1 146 79.5
Glyma.15G016300 Glycine max HOM05D003870 ORTHO05D004567 2.3e-57 225.7 146 78.1
GSVIVG01017071001 Vitis vinifera HOM05D003870 ORTHO05D004567 2.3e-57 225.7 146 76.7
Lalb_Chr25g0279971 Lupinus albus HOM05D003870 ORTHO05D004567 3.0e-57 225.3 147 78.9
Solyc03g120640.3 Solanum lycopersicum HOM05D003870 ORTHO05D004567 5.1e-57 224.6 146 76.0
Lalb_Chr14g0373231 Lupinus albus HOM05D003870 ORTHO05D004567 6.7e-57 224.2 146 78.1
TAR636G2531 Trochodendron aralioides HOM05D003870 ORTHO05D004567 6.7e-57 224.2 146 77.4
Lj3g0012525 Lotus japonicus HOM05D003870 ORTHO05D004567 1.1e-56 223.4 150 77.3
MSTRG.11054 Avicennia marina HOM05D003870 ORTHO05D004567 1.9e-56 222.6 146 77.4
PGSC0003DMG400007571 Solanum tuberosum HOM05D003870 ORTHO05D004567 2.5e-56 222.2 147 78.2
VMungo1080G1700 Vigna mungo HOM05D003870 ORTHO05D004567 2.5e-56 222.2 139 79.9
PSO782G2129 Papaver somniferum HOM05D003870 ORTHO05D004567 3.3e-56 221.9 147 75.5
Actinidia21679 Actinidia chinensis HOM05D003870 ORTHO05D004567 4.3e-56 221.5 146 77.4
MBI01_g07179_MAGBIO Magnolia biondii HOM05D003870 ORTHO05D004567 4.3e-56 221.5 146 74.7
PSO832G3918 Papaver somniferum HOM05D003870 ORTHO05D004567 4.3e-56 221.5 147 75.5
unitig_0.g2124 Utricularia gibba HOM05D003870 ORTHO05D004567 7.4e-56 220.7 146 76.7
Oeu029644.1 Olea europaea HOM05D003870 ORTHO05D004567 1.3e-55 219.9 146 77.4
Peaxi162Scf00034g00513 Petunia axillaris HOM05D003870 ORTHO05D004567 1.3e-55 219.9 143 75.5
Eucgr.J02958 Eucalyptus grandis HOM05D003870 ORTHO05D004567 1.6e-55 219.5 147 75.5
Solyc12g044280.2 Solanum lycopersicum HOM05D003870 ORTHO05D004567 2.1e-55 219.2 146 75.3
Sopen12g022520 Solanum pennellii HOM05D003870 ORTHO05D004567 2.1e-55 219.2 146 75.3
CiPaw.02G148900 Carya illinoinensis HOM05D003870 ORTHO05D004567 3.7e-55 218.4 146 76.7
Glyma.13G357300 Glycine max HOM05D003870 ORTHO05D004567 4.0e-54 214.9 138 79.0
SGA_v2.0_scaffold69G23361 Striga asiatica HOM05D003870 ORTHO05D004567 4.0e-54 214.9 147 75.5
vmacro18888 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 5.3e-54 214.5 147 76.9
Hund00643 Selenicereus undatus HOM05D003870 ORTHO05D004567 2.6e-53 212.2 147 71.4
Rhsim08G0223300 Rhododendron simsii HOM05D003870 ORTHO05D004567 3.4e-53 211.8 147 75.5
Oeu024071.1 Olea europaea HOM05D003870 ORTHO05D004567 4.5e-53 211.5 137 77.4
vmacro16969 Vaccinium macrocarpon HOM05D003870 ORTHO05D004567 1.7e-52 209.5 146 74.0
CDE02G4568 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 8.4e-52 207.2 146 67.8
Zm00001eb295610 Zea mays HOM05D003870 ORTHO05D004567 8.4e-52 207.2 147 74.1
BcaC08g43379 Brassica carinata HOM05D003870 ORTHO05D004567 1.4e-51 206.5 102 99.0
Rhsim12G0200100 Rhododendron simsii HOM05D003870 ORTHO05D004567 1.4e-51 206.5 146 74.0
AL1G60400 Arabidopsis lyrata HOM05D003870 ORTHO05D004567 1.9e-51 206.1 103 97.1
Os05g0560000 Oryza sativa ssp. japonica HOM05D003870 ORTHO05D004567 2.1e-50 202.6 143 72.7
Sc15g0001350 Simmondsia chinensis HOM05D003870 ORTHO05D004567 2.7e-50 202.2 145 69.0
CDE04G3706 Ceratophyllum demersum HOM05D003870 ORTHO05D004567 1.0e-49 200.3 146 66.4
Nitab4.5_0001968g0090 Nicotiana tabacum HOM05D003870 ORTHO05D004567 2.3e-49 199.1 146 71.2
ATR0315G019 Amborella trichopoda HOM05D003870 ORTHO05D004567 5.1e-49 198.0 146 68.5
Actinidia32731 Actinidia chinensis HOM05D003870 ORTHO05D004567 1.1e-48 196.8 130 74.6
AUR62016482 Chenopodium quinoa HOM05D003870 ORTHO05D004567 4.3e-48 194.9 146 70.5
TPR.G37200 Trifolium pratense HOM05D003870 ORTHO05D004567 1.8e-46 189.5 147 70.7
Sopen00g011820 Solanum pennellii HOM05D003870 ORTHO05D004567 5.3e-46 188.0 103 86.4
SEGI_14279 Sequoiadendron giganteum HOM05D003870 ORTHO05D004567 9.0e-46 187.2 143 67.1
HPP92_021482 Vanilla planifolia HOM05D003870 ORTHO05D004567 6.7e-41 171.0 137 70.1
C01p48190 Brassica napus HOM05D003870 ORTHO05D004567 7.4e-40 167.5 146 67.8
BolC1t04783H Brassica oleracea HOM05D003870 ORTHO05D004567 1.6e-39 166.4 146 67.8
Duzib192G0641 Durio zibethinus HOM05D003870 ORTHO05D004567 1.8e-38 162.9 99 82.8
Pp3c15_19390 Physcomitrium patens HOM05D003870 ORTHO05D004567 6.9e-38 161.0 138 55.1
Pp3c9_19520 Physcomitrium patens HOM05D003870 ORTHO05D004567 2.0e-37 159.5 137 56.2
Mapoly0009s0008 Marchantia polymorpha HOM05D003870 ORTHO05D004567 5.5e-35 151.4 144 58.3
Dinv30483 Davidia involucrata HOM05D003870 ORTHO05D004567 5.7e-32 141.4 86 82.6
CBR_g31512 Chara braunii HOM05D003870 ORTHO05D004567 2.2e-31 139.4 146 52.1
MD17G1191200 Malus domestica HOM05D003870 ORTHO05D004567 4.8e-31 138.3 86 77.9
HanXRQChr10g0313451 Helianthus annuus HOM05D003870 ORTHO05D004567 1.9e-27 126.3 86 72.1
ECA247G2331 Erigeron canadensis HOM05D003870 ORTHO05D004567 2.5e-27 125.9 80 73.8
Peaxi162Scf00207g00951 Petunia axillaris HOM05D003870 ORTHO05D004567 8.8e-25 117.5 146 51.4
MD17G1191400 Malus domestica HOM05D003870 ORTHO05D004567 7.2e-19 97.8 60 76.7
MD10G1187500 Malus domestica HOM05D003870 ORTHO05D004567 1.0e-17 94.0 65 69.2
MCO07G351 Micromonas commoda HOM05D003870 ORTHO05D004567 3.9e-17 92.0 126 42.1
MD14G1193300 Malus domestica HOM05D003870 ORTHO05D004567 1.3e-15 87.0 65 67.7
Zm00001eb343540 Zea mays HOM05D003870 ORTHO05D004567 2.2e-12 76.3 131 45.0
unitig_747.g21485 Utricularia gibba HOM05D003870 ORTHO05D004567 3.8e-12 75.5 137 36.5
Cre07.g330250 Chlamydomonas reinhardtii HOM05D003870 ORTHO05D004567 4.2e-11 72.0 103 38.8
MD02G1178900 Malus domestica HOM05D003870 ORTHO05D004567 8.0e-10 67.8 33 90.9
C06p13720 Brassica napus HOM05D003870 ORTHO05D042184 1.5e-08 63.5 44 79.5
BolC6t36544H Brassica oleracea HOM05D003870 ORTHO05D042184 1.5e-08 63.5 44 79.5


User provided reference genes

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