Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t35665H Brassica oleracea HOM05D009214 ORTHO05D013521 1.2e-197 693.0 352 100.0
C06p05580 Brassica napus HOM05D009214 ORTHO05D013521 4.1e-169 598.2 307 98.7
BcaC03g17805 Brassica carinata HOM05D009214 ORTHO05D013521 6.1e-72 275.4 318 52.8
BolC2t11019H Brassica oleracea HOM05D009214 ORTHO05D013521 4.8e-53 212.6 233 54.9
BcaB02g11325 Brassica carinata HOM05D009214 ORTHO05D013521 1.1e-52 211.5 310 43.9
A02p15120 Brassica napus HOM05D009214 ORTHO05D013521 5.5e-49 199.1 342 41.5
C02p20270 Brassica napus HOM05D009214 ORTHO05D000411 2.3e-47 193.7 347 40.6
BolC7t42162H Brassica oleracea HOM05D009214 ORTHO05D013521 4.4e-46 189.5 239 48.1
BolC5t34388H Brassica oleracea HOM05D009214 ORTHO05D000411 8.3e-45 185.3 328 40.2
C02p52220 Brassica napus HOM05D009214 ORTHO05D013521 2.0e-38 164.1 213 45.1
BolC1t01721H Brassica oleracea HOM05D000496 ORTHO05D000411 1.4e-36 157.9 278 41.4
A05p25540 Brassica napus HOM05D009214 ORTHO05D013521 4.1e-36 156.4 198 48.5
A06p43710 Brassica napus HOM05D000496 ORTHO05D000411 9.2e-36 155.2 259 42.1
C02p51670 Brassica napus HOM05D009214 ORTHO05D000411 4.5e-35 152.9 182 51.1
BcaC07g37122 Brassica carinata HOM05D009214 ORTHO05D027576 1.7e-34 151.0 255 42.7
C06p28390 Brassica napus HOM05D000496 ORTHO05D000411 2.9e-34 150.2 121 59.5
BcaC01g00333 Brassica carinata HOM05D010764 ORTHO05D003091 3.3e-33 146.7 249 39.0
BolC9t59648H Brassica oleracea HOM05D000759 ORTHO05D000574 3.3e-33 146.7 99 66.7
C05p04150 Brassica napus HOM05D000496 ORTHO05D000411 5.6e-33 146.0 119 59.7
BraA03t09650Z Brassica rapa HOM05D000496 ORTHO05D000411 5.6e-33 146.0 114 63.2
C03p32630 Brassica napus HOM05D000496 ORTHO05D000411 2.8e-32 143.7 105 64.8
BolC3t21595H Brassica oleracea HOM05D000496 ORTHO05D000411 2.8e-32 143.7 105 64.8
A03p57130 Brassica napus HOM05D009214 ORTHO05D000411 8.0e-32 142.1 266 40.6
BolC7t42883H Brassica oleracea HOM05D000496 ORTHO05D000411 1.4e-31 141.4 313 32.6
BcaC07g38676 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-31 141.0 363 32.5
BcaC08g42936 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-31 140.2 352 33.5
C02p47150 Brassica napus HOM05D010764 ORTHO05D016724 3.0e-31 140.2 235 44.3
C06p17800 Brassica napus HOM05D010764 ORTHO05D016724 2.0e-30 137.5 234 41.9
BolC7t45625H Brassica oleracea HOM05D010764 ORTHO05D016724 5.7e-30 136.0 235 41.3
BolC9t58221H Brassica oleracea HOM05D009214 ORTHO05D013521 4.1e-28 129.8 83 71.1
BolC9t57397H Brassica oleracea HOM05D009214 ORTHO05D013521 1.0e-26 125.2 100 57.0
BcaC03g17398 Brassica carinata HOM05D000003 ORTHO05D000006 1.3e-26 124.8 80 68.8
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 2.3e-26 124.0 328 32.9
BraA08t33995Z Brassica rapa HOM05D010764 ORTHO05D013521 2.3e-26 124.0 193 45.6
BcaB05g24571 Brassica carinata HOM05D000003 ORTHO05D000006 8.6e-26 122.1 207 39.6
BcaB02g10222 Brassica carinata HOM05D000106 ORTHO05D000160 1.8e-23 114.4 213 39.0
BolC5t33965H Brassica oleracea HOM05D010764 ORTHO05D016724 1.8e-23 114.4 231 37.7
BcaB07g30348 Brassica carinata HOM05D010764 ORTHO05D016724 7.5e-22 109.0 335 32.8
BcaC06g36207 Brassica carinata HOM05D000003 ORTHO05D015459 1.7e-21 107.8 261 36.8
BolC6t35268H Brassica oleracea HOM05D009521 ORTHO05D013247 1.7e-21 107.8 310 33.2
C07p06470 Brassica napus HOM05D010185 ORTHO05D015459 2.2e-21 107.5 258 36.8
BolC9t58563H Brassica oleracea HOM05D009521 ORTHO05D000411 2.2e-21 107.5 309 33.0
BolC5t29151H Brassica oleracea HOM05D000496 ORTHO05D016098 6.4e-21 105.9 320 34.7
A04p11750 Brassica napus HOM05D009214 ORTHO05D024265 8.3e-21 105.5 244 39.3
C06p01420 Brassica napus HOM05D000003 ORTHO05D000006 8.3e-21 105.5 70 65.7
C05p16970 Brassica napus HOM05D009214 ORTHO05D024265 1.4e-20 104.8 242 39.7
BraA07t28028Z Brassica rapa HOM05D010185 ORTHO05D015459 4.1e-20 103.2 239 33.1
A02p27000 Brassica napus HOM05D009214 ORTHO05D016098 5.4e-20 102.8 221 36.2
BolC5t34093H Brassica oleracea HOM05D010185 ORTHO05D000411 5.4e-20 102.8 153 41.2
BcaC02g07975 Brassica carinata HOM05D010764 ORTHO05D016724 1.2e-19 101.7 319 35.1
BolC5t31358H Brassica oleracea HOM05D010185 ORTHO05D015459 2.7e-19 100.5 152 39.5
BcaC08g47582 Brassica carinata HOM05D010764 ORTHO05D016724 6.0e-19 99.4 320 33.4
BraA04t15790Z Brassica rapa HOM05D009214 ORTHO05D027438 6.0e-19 99.4 245 32.2
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-19 99.0 238 32.8
BraA04t16683Z Brassica rapa HOM05D000496 ORTHO05D000411 7.8e-19 99.0 242 36.8
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-18 98.6 265 33.2
BcaB05g25017 Brassica carinata HOM05D011474 ORTHO05D000006 2.3e-18 97.4 289 30.1
A03p15520 Brassica napus HOM05D010185 ORTHO05D015459 2.3e-18 97.4 255 33.7
BraA02t07715Z Brassica rapa HOM05D010185 ORTHO05D016098 2.5e-17 94.0 288 33.0
BcaB06g28004 Brassica carinata HOM05D000003 ORTHO05D000006 4.3e-17 93.2 172 38.4
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-17 92.4 241 31.5
A09p12700 Brassica napus HOM05D011474 ORTHO05D016098 7.3e-17 92.4 305 32.8
BolC9t57308H Brassica oleracea HOM05D010185 ORTHO05D015459 7.3e-17 92.4 257 33.1
BcaC04g20372 Brassica carinata HOM05D010185 ORTHO05D015459 1.2e-16 91.7 257 32.7
C05p39170 Brassica napus HOM05D000496 ORTHO05D000411 1.2e-16 91.7 225 32.0
BraA08t32635Z Brassica rapa HOM05D010185 ORTHO05D015459 1.6e-16 91.3 251 32.3
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 6.2e-16 89.4 233 37.8
BolC4t25083H Brassica oleracea HOM05D009214 ORTHO05D024265 6.2e-16 89.4 216 35.6
BcaC04g23888 Brassica carinata HOM05D011474 ORTHO05D027115 1.8e-15 87.8 269 30.9
A01p35560 Brassica napus HOM05D010185 ORTHO05D015459 1.8e-15 87.8 238 33.2
BraA06t26209Z Brassica rapa HOM05D010185 ORTHO05D015459 1.8e-15 87.8 251 29.9
C05p29730 Brassica napus HOM05D009521 ORTHO05D013247 2.3e-15 87.4 229 34.5
BcaC08g42860 Brassica carinata HOM05D011474 ORTHO05D027115 3.1e-15 87.0 269 30.9
Sp7g02720 Schrenkiella parvula HOM05D009214 ORTHO05D000411 3.1e-15 87.0 337 29.1
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-15 86.7 244 32.0
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 6.8e-15 85.9 171 36.8
BolC2t11809H Brassica oleracea HOM05D000496 ORTHO05D000411 8.9e-15 85.5 272 29.8
BcaB01g05566 Brassica carinata HOM05D009214 ORTHO05D000411 2.0e-14 84.3 68 60.3
C07p52790 Brassica napus HOM05D009214 ORTHO05D013521 2.0e-14 84.3 85 62.4
BolC9t57656H Brassica oleracea HOM05D000496 ORTHO05D000411 2.0e-14 84.3 59 57.6
BolC7t43207H Brassica oleracea HOM05D000496 ORTHO05D000411 3.4e-14 83.6 215 31.6
BcaB04g17684 Brassica carinata HOM05D000003 ORTHO05D021670 5.8e-14 82.8 91 47.3
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-13 81.6 91 44.0
A04p28190 Brassica napus HOM05D010185 ORTHO05D016098 1.7e-13 81.3 237 29.1
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 4.9e-13 79.7 353 27.8
BcaC03g17105 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-12 78.6 263 31.2
C02p49320 Brassica napus HOM05D000003 ORTHO05D013521 1.4e-12 78.2 54 77.8
BolC7t44560H Brassica oleracea HOM05D000496 ORTHO05D000411 3.2e-12 77.0 193 34.2
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 4.1e-12 76.6 223 30.9
BcaC08g43151 Brassica carinata HOM05D009214 ORTHO05D000411 3.5e-11 73.6 49 63.3
BcaB04g17984 Brassica carinata HOM05D009214 ORTHO05D013521 4.6e-11 73.2 84 52.4
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-11 73.2 257 30.4
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-10 72.0 237 31.6
BcaB01g00821 Brassica carinata HOM05D010185 ORTHO05D015459 1.3e-10 71.6 222 32.9
BolC8t49529H Brassica oleracea HOM05D000496 ORTHO05D000411 1.7e-10 71.2 55 56.4
BcaNung04087 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-10 70.9 260 30.8
Thhalv10002806m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.3e-10 70.9 154 31.8
BraA02t05709Z Brassica rapa HOM05D011474 ORTHO05D016098 3.9e-10 70.1 311 30.9
BcaC08g43243 Brassica carinata HOM05D000003 ORTHO05D013247 1.1e-09 68.6 244 29.9
BcaC05g29079 Brassica carinata HOM05D010764 ORTHO05D016724 1.5e-09 68.2 334 28.4
BcaC09g48986 Brassica carinata HOM05D019368 ORTHO05D024471 1.5e-09 68.2 263 30.0
BcaB01g06142 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-09 67.8 140 34.3
Thhalv10029191m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.3e-09 66.6 142 32.4
AL1G24220 Arabidopsis lyrata HOM05D010764 ORTHO05D000411 5.6e-09 66.2 173 33.5
BolC3t20253H Brassica oleracea HOM05D010185 ORTHO05D016098 5.6e-09 66.2 81 45.7
BcaB07g34202 Brassica carinata HOM05D009214 ORTHO05D013521 7.3e-09 65.9 70 52.9
C06p38500 Brassica napus HOM05D009214 ORTHO05D000411 7.3e-09 65.9 185 32.4
BcaC03g15116 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-08 65.1 248 28.6
BolC6t35884H Brassica oleracea HOM05D000496 ORTHO05D013247 1.2e-08 65.1 263 31.9
C03p90150 Brassica napus HOM05D009521 ORTHO05D000411 1.6e-08 64.7 249 28.9
BcaC02g11021 Brassica carinata HOM05D000003 ORTHO05D000925 2.8e-08 63.9 235 29.8
BcaB08g34738 Brassica carinata HOM05D010185 ORTHO05D016098 4.7e-08 63.2 115 37.4
Thhalv10003487m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.7e-08 63.2 105 39.0
BcaC04g21213 Brassica carinata HOM05D000496 ORTHO05D000411 8.1e-08 62.4 241 28.2
Thhalv10027498m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.1e-07 62.0 73 39.7
C03p80010 Brassica napus HOM05D010185 ORTHO05D016098 1.4e-07 61.6 99 39.4
BcaB07g32765 Brassica carinata HOM05D009214 ORTHO05D096011 1.8e-07 61.2 125 44.0
BolC8t47004H Brassica oleracea HOM05D009521 ORTHO05D013247 2.3e-07 60.8 127 34.6
BcaB04g17578 Brassica carinata HOM05D009521 ORTHO05D021670 5.2e-07 59.7 243 29.2
Sp7g04460 Schrenkiella parvula HOM05D017415 ORTHO05D014887 1.2e-06 58.5 68 44.1
Sp3g27490 Schrenkiella parvula HOM05D000496 ORTHO05D014887 1.5e-06 58.2 151 29.8
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-06 57.8 63 44.4
BolC8t50915H Brassica oleracea HOM05D009521 ORTHO05D013247 2.0e-06 57.8 247 29.1
BraA01t04229Z Brassica rapa HOM05D000003 ORTHO05D000006 2.6e-06 57.4 67 41.8
BraA03t15653Z Brassica rapa HOM05D010593 ORTHO05D016054 3.4e-06 57.0 287 27.2
Thhalv10027079m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.4e-06 56.6 83 39.8
BcaC05g29414 Brassica carinata HOM05D020256 ORTHO05D000411 5.8e-06 56.2 146 33.6
BcaC09g48140 Brassica carinata HOM05D020256 ORTHO05D000411 5.8e-06 56.2 146 33.6


User provided reference genes

Program Settings