Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t35497H Brassica oleracea HOM05D000335 ORTHO05D021979 4.6e-28 127.1 60 100.0
C06p03620 Brassica napus HOM05D000335 ORTHO05D021979 5.4e-21 103.6 60 86.7
C06p03560 Brassica napus HOM05D000335 ORTHO05D021979 3.0e-19 97.8 58 84.5
BcaB07g33708 Brassica carinata HOM05D000335 ORTHO05D001251 4.9e-14 80.5 61 67.2
Sp1g35820 Schrenkiella parvula HOM05D000335 ORTHO05D001251 4.9e-14 80.5 61 68.9
BraA06t23618Z Brassica rapa HOM05D000335 ORTHO05D001251 1.4e-13 79.0 57 68.4
BcaC08g43089 Brassica carinata HOM05D000335 ORTHO05D001251 2.4e-13 78.2 57 66.7
C06p03480 Brassica napus HOM05D000335 ORTHO05D001251 2.4e-13 78.2 57 66.7
BolC6t35488H Brassica oleracea HOM05D000335 ORTHO05D001251 2.4e-13 78.2 57 66.7
Carub.0001s3805 Capsella rubella HOM05D000335 ORTHO05D001251 3.2e-13 77.8 58 63.8
Thhalv10012211m.g Eutrema salsugineum HOM05D000335 ORTHO05D001251 5.4e-13 77.0 61 63.9
AL1G55732 Arabidopsis lyrata HOM05D000335 ORTHO05D001251 7.1e-13 76.6 57 64.9
AT1G48910 Arabidopsis thaliana HOM05D000335 ORTHO05D001251 2.1e-12 75.1 57 63.2
CARHR038900 Cardamine hirsuta HOM05D000335 ORTHO05D001251 1.3e-11 72.4 55 61.8
Aa31LG10G5010 Aethionema arabicum HOM05D000335 ORTHO05D001251 4.3e-10 67.4 53 56.6
Os11g0207700 Oryza sativa ssp. japonica HOM05D000335 ORTHO05D001251 2.0e-07 58.5 49 51.0
THA.LOC104820418 Tarenaya hassleriana HOM05D000335 ORTHO05D001251 2.0e-07 58.5 43 55.8
Eucgr.L00638 Eucalyptus grandis HOM05D000335 ORTHO05D001251 1.7e-06 55.5 53 50.9
Psat3g024760 Pisum sativum HOM05D000335 ORTHO05D001251 2.9e-06 54.7 52 48.1
AUR62035621 Chenopodium quinoa HOM05D000335 ORTHO05D001251 3.7e-06 54.3 55 43.6
Os11g0207900 Oryza sativa ssp. japonica HOM05D000335 ORTHO05D001251 3.7e-06 54.3 52 46.2
TPR.G25622 Trifolium pratense HOM05D000335 ORTHO05D001251 3.7e-06 54.3 55 43.6
AUR62022873 Chenopodium quinoa HOM05D000335 ORTHO05D001251 4.9e-06 53.9 58 41.4
Hma1.2p1_0399F.1_g144190 Hydrangea macrophylla HOM05D000335 ORTHO05D001251 4.9e-06 53.9 55 43.6
EL10Ac2g04821 Beta vulgaris HOM05D000335 ORTHO05D001251 6.4e-06 53.5 55 41.8
TPR.G25623 Trifolium pratense HOM05D000335 ORTHO05D021979 6.4e-06 53.5 55 43.6
CiPaw.03G122800 Carya illinoinensis HOM05D000335 ORTHO05D001251 8.4e-06 53.1 58 39.7


User provided reference genes

Program Settings