Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t35428H Brassica oleracea HOM05D007117 ORTHO05D000038 2.0e-75 285.8 158 100.0
C06p03090 Brassica napus HOM05D007117 ORTHO05D000038 4.2e-73 278.1 158 93.7
BcaC08g43046 Brassica carinata HOM05D007117 ORTHO05D000038 3.9e-63 245.0 119 99.2
BraA06t23645Z Brassica rapa HOM05D007117 ORTHO05D000038 1.2e-59 233.4 119 95.0
A06p04400 Brassica napus HOM05D007117 ORTHO05D000038 6.5e-58 227.6 119 93.3
A06p04470 Brassica napus HOM05D007117 ORTHO05D000038 1.1e-57 226.9 119 94.1
BcaB07g33747 Brassica carinata HOM05D007117 ORTHO05D000038 1.9e-41 172.9 120 73.3
A06p04390 Brassica napus HOM05D007117 ORTHO05D000038 7.0e-28 127.9 119 62.2
C06p03130 Brassica napus HOM05D007117 ORTHO05D000038 1.2e-27 127.1 119 61.3
BolC6t35431H Brassica oleracea HOM05D007117 ORTHO05D000038 1.2e-27 127.1 119 61.3
BraA06t23644Z Brassica rapa HOM05D007117 ORTHO05D000038 3.5e-27 125.6 118 61.9
BcaC08g43053 Brassica carinata HOM05D007117 ORTHO05D000038 1.7e-26 123.2 119 60.5
BcaB03g12961 Brassica carinata HOM05D007117 ORTHO05D000038 5.4e-20 101.7 121 49.6
BcaB03g12957 Brassica carinata HOM05D007117 ORTHO05D000038 3.5e-19 99.0 119 50.4
BcaB03g12959 Brassica carinata HOM05D007117 ORTHO05D000038 3.5e-19 99.0 119 50.4
BcaC07g38947 Brassica carinata HOM05D007117 ORTHO05D000038 3.5e-19 99.0 119 50.4
A08p30200 Brassica napus HOM05D007117 ORTHO05D000038 7.8e-19 97.8 118 51.7
Thhalv10009703m.g Eutrema salsugineum HOM05D007117 ORTHO05D000038 7.8e-19 97.8 119 47.1
BraA08t34955Z Brassica rapa HOM05D007117 ORTHO05D000038 1.3e-18 97.1 118 51.7
A08p30220 Brassica napus HOM05D007117 ORTHO05D000038 1.7e-18 96.7 118 51.7
BolC8t49516H Brassica oleracea HOM05D007117 ORTHO05D000038 1.9e-17 93.2 119 49.6
C08p18920 Brassica napus HOM05D007117 ORTHO05D000038 3.3e-17 92.4 119 49.6
BcaC07g38945 Brassica carinata HOM05D007117 ORTHO05D000038 4.3e-17 92.0 119 49.6
BcaC05g25777 Brassica carinata HOM05D007117 ORTHO05D000038 1.6e-16 90.1 119 45.4
C05p17090 Brassica napus HOM05D007117 ORTHO05D000038 3.6e-16 89.0 119 44.5
BolC5t30415H Brassica oleracea HOM05D007117 ORTHO05D000038 3.6e-16 89.0 119 44.5
BolC5t30419H Brassica oleracea HOM05D007117 ORTHO05D000038 3.6e-16 89.0 119 44.5
BraA06t24610Z Brassica rapa HOM05D007117 ORTHO05D000038 3.6e-16 89.0 119 44.5
A06p14910 Brassica napus HOM05D007117 ORTHO05D000038 6.2e-16 88.2 119 44.5
A06p14900 Brassica napus HOM05D007117 ORTHO05D000038 8.1e-16 87.8 119 44.5
A06p14950 Brassica napus HOM05D007117 ORTHO05D000038 8.1e-16 87.8 119 44.5
BraA06t24613Z Brassica rapa HOM05D007117 ORTHO05D000038 8.1e-16 87.8 119 44.5
BcaB07g32215 Brassica carinata HOM05D007117 ORTHO05D000038 4.0e-15 85.5 122 40.2
A06p14930 Brassica napus HOM05D007117 ORTHO05D000038 2.0e-14 83.2 119 42.0
BcaC05g25776 Brassica carinata HOM05D007117 ORTHO05D000038 9.8e-14 80.9 119 41.2
BolC5t30413H Brassica oleracea HOM05D007117 ORTHO05D000038 9.8e-14 80.9 119 41.2
BolC5t30417H Brassica oleracea HOM05D007117 ORTHO05D000038 9.8e-14 80.9 119 41.2
Thhalv10010983m.g Eutrema salsugineum HOM05D007117 ORTHO05D000038 1.3e-13 80.5 119 42.9
C05p17070 Brassica napus HOM05D007117 ORTHO05D000038 2.2e-13 79.7 119 41.2
BcaB07g31893 Brassica carinata HOM05D007117 ORTHO05D000038 7.1e-12 74.7 116 43.1
BraA06t24611Z Brassica rapa HOM05D007117 ORTHO05D000038 7.1e-12 74.7 111 41.4
BraA06t24616Z Brassica rapa HOM05D007117 ORTHO05D000038 7.1e-12 74.7 109 43.1
BcaB07g31894 Brassica carinata HOM05D007117 ORTHO05D000038 3.5e-11 72.4 107 42.1
C05p17150 Brassica napus HOM05D007117 ORTHO05D000038 6.0e-11 71.6 112 41.1
A06p14970 Brassica napus HOM05D007117 ORTHO05D000038 7.8e-11 71.2 111 42.3
CARHR019430 Cardamine hirsuta HOM05D007117 ORTHO05D000038 1.0e-10 70.9 117 41.0
BcaB07g32220 Brassica carinata HOM05D007117 ORTHO05D000038 8.6e-10 67.8 119 38.7
Carub.0001s1841 Capsella rubella HOM05D007117 ORTHO05D000038 1.1e-09 67.4 120 44.2
CARHR019400 Cardamine hirsuta HOM05D007117 ORTHO05D000038 6.8e-07 58.2 111 34.2
CARHR189080 Cardamine hirsuta HOM05D007117 ORTHO05D000038 8.9e-07 57.8 106 34.9
AL1G31290 Arabidopsis lyrata HOM05D007117 ORTHO05D000038 9.9e-06 54.3 118 37.3


User provided reference genes

Program Settings