Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC6t35166H Brassica oleracea HOM05D000353 ORTHO05D032815 7.8e-25 116.3 58 100.0
C06p00360 Brassica napus HOM05D000353 ORTHO05D032815 4.3e-23 110.5 58 94.8
BcaB08g35178 Brassica carinata HOM05D000353 ORTHO05D032815 8.3e-19 96.3 56 83.9
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 1.4e-18 95.5 56 87.5
BcaB04g17355 Brassica carinata HOM05D000353 ORTHO05D005681 1.7e-16 88.6 54 83.3
C05p37600 Brassica napus HOM05D000353 ORTHO05D040703 1.8e-13 78.6 56 67.9
BolC5t32499H Brassica oleracea HOM05D000353 ORTHO05D040703 1.8e-13 78.6 54 70.4
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 6.8e-13 76.6 56 69.6
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 1.5e-12 75.5 57 63.2
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 1.5e-12 75.5 55 67.3
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 7.5e-12 73.2 54 63.0
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 2.9e-11 71.2 36 88.9
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 2.9e-11 71.2 54 61.1
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 6.4e-11 70.1 57 59.6
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 1.6e-09 65.5 57 56.1
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 1.6e-09 65.5 56 55.4
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 2.1e-09 65.1 56 55.4
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 2.1e-09 65.1 56 55.4
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 2.1e-09 65.1 56 55.4
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 2.1e-09 65.1 56 55.4
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 3.5e-09 64.3 56 57.1
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 3.5e-09 64.3 56 55.4
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 3.5e-09 64.3 56 55.4
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 3.5e-09 64.3 56 57.1
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 3.5e-09 64.3 56 55.4
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 4.6e-09 63.9 56 55.4
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 6.0e-09 63.5 56 57.1
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 6.0e-09 63.5 56 53.6
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 6.0e-09 63.5 56 57.1
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 1.3e-08 62.4 56 55.4
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 1.3e-08 62.4 56 53.6
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 3.9e-08 60.8 53 54.7
A05p21310 Brassica napus HOM05D000353 ORTHO05D042653 6.6e-08 60.1 53 54.7
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 1.5e-07 58.9 53 50.9
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 1.5e-07 58.9 51 56.9
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 1.5e-07 58.9 51 56.9
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 1.9e-07 58.5 53 49.1
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 1.9e-07 58.5 54 57.4
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 2.5e-07 58.2 56 46.4
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 2.5e-07 58.2 56 46.4
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 2.5e-07 58.2 56 53.6
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 2.5e-07 58.2 56 46.4
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 3.3e-07 57.8 56 46.4
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 3.3e-07 57.8 56 46.4
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 3.3e-07 57.8 56 46.4
BcaC05g29110 Brassica carinata HOM05D000353 ORTHO05D039625 5.6e-07 57.0 53 49.1
BcaB06g26120 Brassica carinata HOM05D000353 ORTHO05D013242 7.3e-07 56.6 53 49.1
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 7.3e-07 56.6 56 44.6
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 7.3e-07 56.6 56 46.4
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 7.3e-07 56.6 56 46.4
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-06 55.8 56 44.6
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 1.2e-06 55.8 54 44.4
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 1.2e-06 55.8 54 44.4
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 1.6e-06 55.5 56 44.6
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 1.6e-06 55.5 56 44.6
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 1.6e-06 55.5 54 42.6
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 1.6e-06 55.5 54 55.6
BolC9t55252H Brassica oleracea HOM05D000353 ORTHO05D042653 1.6e-06 55.5 41 61.0
C09p64180 Brassica napus HOM05D000353 ORTHO05D039625 2.1e-06 55.1 54 44.4
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 2.8e-06 54.7 56 44.6
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 3.6e-06 54.3 56 42.9
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 4.7e-06 53.9 56 50.0
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 4.7e-06 53.9 56 50.0
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 8.1e-06 53.1 54 40.7
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 8.1e-06 53.1 54 42.6
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 8.1e-06 53.1 56 42.9
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 8.1e-06 53.1 54 42.6


User provided reference genes

Program Settings