Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p75330 Brassica napus HOM05D000183 ORTHO05D000100 1.1e-46 189.9 116 100.0
BolC5t35132H Brassica oleracea HOM05D000183 ORTHO05D000100 1.1e-46 189.9 116 100.0
BolC5t35126H Brassica oleracea HOM05D000183 ORTHO05D000100 1.8e-44 182.6 116 99.1
BcaC05g30396 Brassica carinata HOM05D000183 ORTHO05D000100 3.3e-43 178.3 116 91.4
BraA05t23182Z Brassica rapa HOM05D000183 ORTHO05D000100 3.1e-41 171.8 116 83.6
BcaC05g30481 Brassica carinata HOM05D000183 ORTHO05D000100 9.1e-41 170.2 116 78.4
Thhalv10021334m.g Eutrema salsugineum HOM05D000183 ORTHO05D000100 2.0e-35 152.5 116 69.0
AL3G11020 Arabidopsis lyrata HOM05D000183 ORTHO05D000100 4.4e-35 151.4 116 69.0
CARHR075820 Cardamine hirsuta HOM05D000183 ORTHO05D000100 2.8e-34 148.7 116 68.1
BcaC09g47638 Brassica carinata HOM05D000183 ORTHO05D000100 1.4e-33 146.4 116 69.0
BolC1t05942H Brassica oleracea HOM05D000183 ORTHO05D000100 1.4e-33 146.4 116 69.0
AT3G01220 Arabidopsis thaliana HOM05D000183 ORTHO05D000100 5.3e-33 144.4 116 65.5
BcaB04g21427 Brassica carinata HOM05D000183 ORTHO05D000100 9.1e-33 143.7 116 68.1
Carub.0003s0092 Capsella rubella HOM05D000183 ORTHO05D000100 4.5e-32 141.4 117 66.7
BNapus_Darmor_BZH_scaffold_119p00230 Brassica napus HOM05D000183 ORTHO05D000100 5.9e-32 141.0 116 67.2
BNapus_Darmor_BZH_scaffold_97p00200 Brassica napus HOM05D000183 ORTHO05D000100 5.9e-32 141.0 116 67.2
BraA01t04646Z Brassica rapa HOM05D000183 ORTHO05D000100 5.9e-32 141.0 116 67.2
Sp3g00880 Schrenkiella parvula HOM05D000183 ORTHO05D000100 3.8e-31 138.3 116 73.3
Aa31LG5G12390 Aethionema arabicum HOM05D000183 ORTHO05D000100 1.2e-21 106.7 125 68.0
BcaNung03328 Brassica carinata HOM05D000183 ORTHO05D000100 1.6e-16 89.7 118 48.3
A02p02910 Brassica napus HOM05D000183 ORTHO05D000100 2.0e-16 89.4 122 48.4
BraA02t05264Z Brassica rapa HOM05D000183 ORTHO05D000100 2.0e-16 89.4 122 48.4
Carub.0006s1332 Capsella rubella HOM05D000183 ORTHO05D000100 7.7e-16 87.4 120 48.3
CARHR198160 Cardamine hirsuta HOM05D000183 ORTHO05D000100 1.0e-15 87.0 119 45.4
Thhalv10014157m.g Eutrema salsugineum HOM05D000183 ORTHO05D000100 1.0e-15 87.0 122 49.2
AT5G15150 Arabidopsis thaliana HOM05D000183 ORTHO05D000100 5.0e-15 84.7 120 45.8
THA.LOC104821039 Tarenaya hassleriana HOM05D000183 ORTHO05D000100 6.5e-15 84.3 116 47.4
AL6G25970 Arabidopsis lyrata HOM05D000183 ORTHO05D000100 3.2e-14 82.0 135 44.4
BcaC03g13426 Brassica carinata HOM05D000183 ORTHO05D000100 3.2e-14 82.0 120 46.7
C02p07550 Brassica napus HOM05D000183 ORTHO05D000100 3.2e-14 82.0 120 46.7
BolC2t06685H Brassica oleracea HOM05D000183 ORTHO05D000100 3.2e-14 82.0 120 46.7
BcaB08g36921 Brassica carinata HOM05D000183 ORTHO05D000100 1.8e-12 76.3 105 43.8
A03p07000 Brassica napus HOM05D000183 ORTHO05D000100 1.2e-11 73.6 106 45.3
BcaC04g18980 Brassica carinata HOM05D000183 ORTHO05D000100 1.5e-11 73.2 108 44.4
A10p23700 Brassica napus HOM05D000183 ORTHO05D000100 1.5e-11 73.2 108 44.4
C09p61980 Brassica napus HOM05D000183 ORTHO05D000100 1.5e-11 73.2 108 44.4
BolC9t59037H Brassica oleracea HOM05D000183 ORTHO05D000100 1.5e-11 73.2 108 44.4
BraA10t44433Z Brassica rapa HOM05D000183 ORTHO05D000100 1.5e-11 73.2 108 44.4
Gohir.A09G019350 Gossypium hirsutum HOM05D000183 ORTHO05D000100 1.6e-08 63.2 111 36.9
Gohir.D09G018800 Gossypium hirsutum HOM05D000183 ORTHO05D000100 2.7e-08 62.4 111 36.0
Gorai.006G022100 Gossypium raimondii HOM05D000183 ORTHO05D000100 2.7e-08 62.4 111 36.0
Atru.chr8.125 Acer truncatum HOM05D000183 ORTHO05D000100 4.5e-08 61.6 123 34.1
BcaB01g05077 Brassica carinata HOM05D000183 ORTHO05D000100 5.9e-08 61.2 117 35.9
Sp6g28920 Schrenkiella parvula HOM05D000183 ORTHO05D000100 5.9e-08 61.2 45 62.2
C03p07980 Brassica napus HOM05D000183 ORTHO05D000100 2.3e-07 59.3 32 71.9
BolC3t13295H Brassica oleracea HOM05D000183 ORTHO05D000100 2.3e-07 59.3 32 71.9
BraA03t10021Z Brassica rapa HOM05D000183 ORTHO05D000100 2.3e-07 59.3 32 71.9
Thecc.04G078400 Theobroma cacao HOM05D000183 ORTHO05D000100 8.6e-07 57.4 118 33.9
Duzib264G0982 Durio zibethinus HOM05D000183 ORTHO05D000100 1.9e-06 56.2 118 33.9
Duzib147G1144 Durio zibethinus HOM05D000183 ORTHO05D000100 2.5e-06 55.8 118 33.9
PGR142G2326 Punica granatum HOM05D000183 ORTHO05D000100 2.5e-06 55.8 124 33.1
Duzib264G0260 Durio zibethinus HOM05D000183 ORTHO05D000100 9.5e-06 53.9 118 33.1


User provided reference genes

Program Settings