Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t34931H Brassica oleracea HOM05D000171 ORTHO05D000101 2.7e-36 154.8 79 100.0
A05p43020 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-31 137.5 79 92.4
C05p62780 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-29 132.9 68 98.5
BraA05t23046Z Brassica rapa HOM05D000171 ORTHO05D000101 3.5e-28 127.9 78 87.2
A05p43010 Brassica napus HOM05D000171 ORTHO05D000101 7.8e-20 100.1 62 80.6
BcaC05g30223 Brassica carinata HOM05D000171 ORTHO05D000101 3.9e-19 97.8 68 76.5
BraA05t23045Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-18 96.3 62 79.0
A04p34160 Brassica napus HOM05D000171 ORTHO05D000101 2.2e-14 82.0 69 63.8
BolC4t28693H Brassica oleracea HOM05D000171 ORTHO05D000101 2.2e-14 82.0 70 67.1
A04p34150 Brassica napus HOM05D000171 ORTHO05D000101 9.3e-13 76.6 67 64.2
C04p61700 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-10 68.9 58 56.9
A04p24790 Brassica napus HOM05D000171 ORTHO05D000101 3.3e-10 68.2 78 47.4
Thhalv10025406m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.3e-10 67.8 61 52.5
BraA01t02191Z Brassica rapa HOM05D000171 ORTHO05D000101 5.6e-10 67.4 46 67.4
A01p22790 Brassica napus HOM05D000171 ORTHO05D000101 9.6e-10 66.6 71 52.1
BraA04t17996Z Brassica rapa HOM05D000171 ORTHO05D000101 9.6e-10 66.6 78 46.2
C04p61720 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-09 66.2 48 60.4
C01p28350 Brassica napus HOM05D000171 ORTHO05D000101 2.8e-09 65.1 44 68.2
BraA04t18877Z Brassica rapa HOM05D000171 ORTHO05D000101 4.8e-09 64.3 39 74.4
Thhalv10027150m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.8e-09 64.3 62 50.0
A05p14170 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-08 62.8 56 60.7
C04p17900 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-08 62.8 68 51.5
BolC4t23338H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-08 62.8 68 51.5
BolC4t23403H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-08 62.8 72 52.8
BraA05t20344Z Brassica rapa HOM05D000171 ORTHO05D000101 1.4e-08 62.8 56 60.7
AL4G27770 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.4e-08 62.0 58 48.3
C05p61040 Brassica napus HOM05D000171 ORTHO05D000101 2.4e-08 62.0 69 52.2
BolC5t34761H Brassica oleracea HOM05D000171 ORTHO05D000101 2.4e-08 62.0 69 52.2
BraA01t02190Z Brassica rapa HOM05D000171 ORTHO05D000101 3.1e-08 61.6 59 54.2
BolC4t23404H Brassica oleracea HOM05D000171 ORTHO05D000101 6.9e-08 60.5 56 58.9
C04p18540 Brassica napus HOM05D000171 ORTHO05D000101 9.0e-08 60.1 57 57.9
Carub.0004s0542 Capsella rubella HOM05D000171 ORTHO05D000101 9.0e-08 60.1 69 46.4
BcaB01g03998 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-07 59.3 78 46.2
Carub.0005s1559 Capsella rubella HOM05D000171 ORTHO05D000101 3.4e-07 58.2 44 59.1
AL5G26270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.5e-07 57.8 66 45.5
A01p22770 Brassica napus HOM05D000171 ORTHO05D000101 4.5e-07 57.8 59 50.8
Thhalv10027194m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.5e-07 57.8 41 68.3
C01p28340 Brassica napus HOM05D000171 ORTHO05D000101 5.8e-07 57.4 44 61.4
BolC1t02763H Brassica oleracea HOM05D000171 ORTHO05D000101 5.8e-07 57.4 44 61.4
BcaB02g10924 Brassica carinata HOM05D000171 ORTHO05D000101 7.6e-07 57.0 54 53.7
C04p17930 Brassica napus HOM05D000171 ORTHO05D000101 7.6e-07 57.0 58 58.6
C04p18500 Brassica napus HOM05D000171 ORTHO05D000101 7.6e-07 57.0 72 50.0
BolC4t23340H Brassica oleracea HOM05D000171 ORTHO05D000101 7.6e-07 57.0 58 58.6
BolC4t23399H Brassica oleracea HOM05D000171 ORTHO05D000101 7.6e-07 57.0 42 64.3
BcaB06g28544 Brassica carinata HOM05D000171 ORTHO05D000101 9.9e-07 56.6 42 66.7
A05p24920 Brassica napus HOM05D000171 ORTHO05D000101 9.9e-07 56.6 40 62.5
Carub.0005s1576 Capsella rubella HOM05D000171 ORTHO05D000101 9.9e-07 56.6 44 56.8
Carub.0005s1578 Capsella rubella HOM05D000171 ORTHO05D000101 9.9e-07 56.6 44 56.8
AL5G29232 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-06 56.2 40 65.0
AT1G46912 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.3e-06 56.2 62 51.6
BcaB06g28593 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-06 56.2 57 47.4
Carub.0001s3582 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-06 56.2 58 44.8
AT2G19630 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.7e-06 55.8 54 53.7
C06p14080 Brassica napus HOM05D000171 ORTHO05D000101 1.7e-06 55.8 65 47.7
BolC6t36586H Brassica oleracea HOM05D000171 ORTHO05D000101 1.7e-06 55.8 65 47.7
BraA05t21376Z Brassica rapa HOM05D000171 ORTHO05D000101 1.7e-06 55.8 40 60.0
Thhalv10012153m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-06 55.8 63 47.6
CARHR288800 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.2e-06 55.5 44 56.8
AL8G43560 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.9e-06 55.1 68 39.7
AL1G45350 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.8e-06 54.7 40 62.5
C05p38740 Brassica napus HOM05D000171 ORTHO05D000101 3.8e-06 54.7 40 60.0
BolC5t32614H Brassica oleracea HOM05D000171 ORTHO05D000101 3.8e-06 54.7 40 60.0
Carub.0001s2932 Capsella rubella HOM05D000171 ORTHO05D000101 3.8e-06 54.7 41 61.0
Carub.0004s1336 Capsella rubella HOM05D000171 ORTHO05D000101 3.8e-06 54.7 75 38.7
CARHR219450 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.8e-06 54.7 47 53.2
CARHR261700 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.8e-06 54.7 45 60.0
Aa31LG6G10520 Aethionema arabicum HOM05D000171 ORTHO05D000101 4.9e-06 54.3 40 65.0
AL1G45470 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.9e-06 54.3 40 62.5
AL1G45480 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.9e-06 54.3 40 60.0
AT1G53550 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.9e-06 54.3 61 44.3
BcaC02g07989 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-06 54.3 68 50.0
BcaC08g42944 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-06 54.3 40 65.0
A04p24910 Brassica napus HOM05D000171 ORTHO05D000101 4.9e-06 54.3 49 49.0
C04p18520 Brassica napus HOM05D000171 ORTHO05D000101 4.9e-06 54.3 58 55.2
C04p61010 Brassica napus HOM05D000171 ORTHO05D000101 4.9e-06 54.3 68 50.0
C05p53440 Brassica napus HOM05D000171 ORTHO05D000101 4.9e-06 54.3 62 46.8
C06p01870 Brassica napus HOM05D000171 ORTHO05D000101 4.9e-06 54.3 40 65.0
BolC4t27589H Brassica oleracea HOM05D000171 ORTHO05D000101 4.9e-06 54.3 68 50.0
BolC5t34021H Brassica oleracea HOM05D000171 ORTHO05D000101 4.9e-06 54.3 62 46.8
BolC6t35315H Brassica oleracea HOM05D000171 ORTHO05D000101 4.9e-06 54.3 40 65.0
AL1G45300 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.4e-06 53.9 40 60.0
AT3G23960 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.4e-06 53.9 60 46.7
BolC3t13623H Brassica oleracea HOM05D000171 ORTHO05D000101 6.4e-06 53.9 56 50.0
Carub.0006s2882 Capsella rubella HOM05D000171 ORTHO05D000101 6.4e-06 53.9 44 59.1
AL1G46270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.4e-06 53.5 41 58.5
AT5G65850 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.4e-06 53.5 63 41.3
A04p24850 Brassica napus HOM05D000171 ORTHO05D000101 8.4e-06 53.5 63 44.4
Carub.0004s0543 Capsella rubella HOM05D000171 ORTHO05D000101 8.4e-06 53.5 46 52.2


User provided reference genes

Program Settings