Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t34464H Brassica oleracea HOM05D005095 ORTHO05D006156 1.7e-182 642.5 310 100.0
C05p58070 Brassica napus HOM05D005095 ORTHO05D006156 3.8e-179 631.3 310 97.7
A05p39050 Brassica napus HOM05D005095 ORTHO05D006156 2.5e-178 628.6 310 96.8
BraA05t22697Z Brassica rapa HOM05D005095 ORTHO05D006156 2.5e-178 628.6 310 96.8
Thhalv10021191m.g Eutrema salsugineum HOM05D005095 ORTHO05D006156 1.4e-165 586.3 310 87.7
AT3G09970 Arabidopsis thaliana HOM05D005095 ORTHO05D006156 4.1e-165 584.7 310 88.7
AL3G21250 Arabidopsis lyrata HOM05D005095 ORTHO05D006156 9.2e-165 583.6 310 88.1
Sp3g08310 Schrenkiella parvula HOM05D005095 ORTHO05D006156 9.2e-165 583.6 310 89.4
CARHR084480 Cardamine hirsuta HOM05D005095 ORTHO05D006156 7.8e-164 580.5 310 87.1
BcaC05g29724 Brassica carinata HOM05D005095 ORTHO05D006156 9.5e-162 573.5 310 88.4
Aa31LG3G2470 Aethionema arabicum HOM05D005095 ORTHO05D006156 3.6e-153 545.0 308 82.5
THA.LOC104816365 Tarenaya hassleriana HOM05D005095 ORTHO05D006156 1.4e-149 533.1 309 79.9
AT3G09960 Arabidopsis thaliana HOM05D005095 ORTHO05D006156 3.0e-147 525.4 311 80.7
CARHR084470 Cardamine hirsuta HOM05D005095 ORTHO05D006156 3.0e-147 525.4 306 80.1
Carub.0003s0907 Capsella rubella HOM05D005095 ORTHO05D006156 3.8e-142 508.4 291 84.2
C05p58080 Brassica napus HOM05D005095 ORTHO05D006156 2.4e-141 505.8 310 77.1
Atru.chr8.1610 Acer truncatum HOM05D005095 ORTHO05D006156 5.1e-139 498.0 303 74.3
Cpa.g.sc5.61 Carica papaya HOM05D005095 ORTHO05D006156 1.1e-136 490.3 309 72.2
Peaxi162Scf00820g00056 Petunia axillaris HOM05D005095 ORTHO05D006156 3.1e-136 488.8 304 72.0
CSS0041742 Camellia sinensis var. sinensis HOM05D005095 ORTHO05D006156 5.2e-136 488.0 302 73.2
Nitab4.5_0009950g0030 Nicotiana tabacum HOM05D005095 ORTHO05D006156 8.9e-136 487.3 304 72.0
CANSAT51G0008 Cannabis sativa HOM05D005095 ORTHO05D006156 2.6e-135 485.7 303 72.6
CANSAT51G0010 Cannabis sativa HOM05D005095 ORTHO05D006156 2.6e-135 485.7 303 72.6
CANSAT51G0015 Cannabis sativa HOM05D005095 ORTHO05D006156 2.6e-135 485.7 303 72.6
Sopen09g003900 Solanum pennellii HOM05D005095 ORTHO05D006156 4.4e-135 485.0 304 71.7
Sed0002679 Sechium edule HOM05D005095 ORTHO05D006156 7.6e-135 484.2 307 71.7
Medtr1g060860 Medicago truncatula HOM05D005095 ORTHO05D006156 9.9e-135 483.8 304 72.0
Lj2A132T56 Lonicera japonica HOM05D005095 ORTHO05D006156 1.7e-134 483.0 305 71.8
TWI74G0549 Tripterygium wilfordii HOM05D005095 ORTHO05D006156 3.8e-134 481.9 307 71.3
Manes.08G022501 Manihot esculenta HOM05D005095 ORTHO05D006156 4.9e-134 481.5 309 70.2
PGSC0003DMG400002713 Solanum tuberosum HOM05D005095 ORTHO05D006156 1.1e-133 480.3 304 71.7
Dinv21237 Davidia involucrata HOM05D005095 ORTHO05D006156 2.4e-133 479.2 302 71.9
QL07p039953 Quercus lobata HOM05D005095 ORTHO05D006156 7.1e-133 477.6 302 72.2
Potri.002G156500 Populus trichocarpa HOM05D005095 ORTHO05D006156 9.3e-133 477.2 307 69.1
Thecc.05G083800 Theobroma cacao HOM05D005095 ORTHO05D006156 1.2e-132 476.9 307 70.7
Nn6g35006 Nelumbo nucifera HOM05D005095 ORTHO05D006156 2.1e-132 476.1 300 72.7
MD12G1020700 Malus domestica HOM05D005095 ORTHO05D006156 3.5e-132 475.3 307 70.0
TPR.G5702 Trifolium pratense HOM05D005095 ORTHO05D006156 3.0e-131 472.2 308 69.5
AUR62033539 Chenopodium quinoa HOM05D005095 ORTHO05D006156 3.9e-131 471.9 304 69.7
CAN.G824.21 Capsicum annuum HOM05D005095 ORTHO05D006156 1.1e-130 470.3 304 69.7
CsaV3_3G036990 Cucumis sativus L. HOM05D005095 ORTHO05D006156 1.9e-130 469.5 307 68.7
PGR004G0044 Punica granatum HOM05D005095 ORTHO05D006156 1.9e-130 469.5 304 69.7
Aqoxy4G02848 Aquilegia oxysepala HOM05D005095 ORTHO05D006156 2.5e-130 469.2 305 70.5
Glyma.U031320 Glycine max HOM05D005095 ORTHO05D006156 2.5e-130 469.2 312 69.2
HanXRQChr14g0432521 Helianthus annuus HOM05D005095 ORTHO05D006156 2.5e-130 469.2 300 70.3
Ca_11632_v3 Cicer arietinum L. HOM05D005095 ORTHO05D006156 4.3e-130 468.4 302 69.9
Actinidia05448 Actinidia chinensis HOM05D005095 ORTHO05D006156 5.6e-130 468.0 302 70.5
MELO3C009446.2 Cucumis melo HOM05D005095 ORTHO05D006156 5.6e-130 468.0 307 68.7
Lsat_1_v5_gn_2_22640 Lactuca sativa HOM05D005095 ORTHO05D006156 5.6e-130 468.0 300 71.3
Sabra02G0124100 Salix brachista HOM05D005095 ORTHO05D006156 5.6e-130 468.0 332 64.8
Potri.002G156200 Populus trichocarpa HOM05D005095 ORTHO05D006156 1.6e-129 466.5 307 67.1
Gorai.009G406100 Gossypium raimondii HOM05D005095 ORTHO05D006156 2.1e-129 466.1 305 71.8
Ciclev10012289m.g Citrus clementina HOM05D005095 ORTHO05D006156 3.6e-129 465.3 304 68.8
arahy.Tifrunner.gnm1.ann1.133YU3 Arachis hypogaea HOM05D005095 ORTHO05D006156 4.8e-129 464.9 298 71.1
arahy.Tifrunner.gnm1.ann1.ARK388 Arachis hypogaea HOM05D005095 ORTHO05D006156 4.8e-129 464.9 298 71.1
COL.COLO4_29793 Corchorus olitorius HOM05D005095 ORTHO05D006156 4.8e-129 464.9 309 71.2
Rhsim03G0078800 Rhododendron simsii HOM05D005095 ORTHO05D006156 4.8e-129 464.9 303 70.3
MSTRG.19241 Avicennia marina HOM05D005095 ORTHO05D006156 6.2e-129 464.5 307 69.1
Gohir.D04G102800 Gossypium hirsutum HOM05D005095 ORTHO05D006156 8.1e-129 464.2 305 71.5
CiPaw.10G006700 Carya illinoinensis HOM05D005095 ORTHO05D006156 1.1e-128 463.8 307 69.1
Lalb_Chr21g0315581 Lupinus albus HOM05D005095 ORTHO05D006156 1.4e-128 463.4 307 68.4
Cfa016561 Carpinus fangiana HOM05D005095 ORTHO05D006156 1.8e-128 463.0 307 69.7
Gohir.A04G065328 Gossypium hirsutum HOM05D005095 ORTHO05D006156 1.8e-128 463.0 305 70.5
Prupe.7G115300 Prunus persica HOM05D005095 ORTHO05D006156 1.8e-128 463.0 307 67.4
Thecc.05G084100 Theobroma cacao HOM05D005095 ORTHO05D006156 4.0e-128 461.8 307 68.4
Lj5g0003292 Lotus japonicus HOM05D005095 ORTHO05D006156 5.3e-128 461.5 300 70.7
Psat6g080360 Pisum sativum HOM05D005095 ORTHO05D006156 1.2e-127 460.3 307 68.4
VMungo0720G2061 Vigna mungo HOM05D005095 ORTHO05D006156 1.2e-127 460.3 302 69.2
ClCG10G019200 Citrullus lanatus HOM05D005095 ORTHO05D006156 1.5e-127 459.9 317 66.2
Duzib093G0109 Durio zibethinus HOM05D005095 ORTHO05D006156 2.0e-127 459.5 305 70.8
Migut.J00973 Erythranthe guttata HOM05D005095 ORTHO05D006156 3.4e-127 458.8 309 69.9
ECA238G3195 Erigeron canadensis HOM05D005095 ORTHO05D006156 4.5e-127 458.4 303 69.3
MBI01_g08270_MAGBIO Magnolia biondii HOM05D005095 ORTHO05D006156 4.5e-127 458.4 308 67.5
Nitab4.5_0008581g0020 Nicotiana tabacum HOM05D005095 ORTHO05D006156 1.3e-126 456.8 304 70.1
Phvul.007G222200 Phaseolus vulgaris HOM05D005095 ORTHO05D006156 1.7e-126 456.4 302 69.5
TAR623G0504 Trochodendron aralioides HOM05D005095 ORTHO05D006156 2.9e-126 455.7 290 71.0
SGA_v2.0_scaffold13G06769 Striga asiatica HOM05D005095 ORTHO05D006156 4.9e-126 454.9 303 69.0
PSO384G1693 Papaver somniferum HOM05D005095 ORTHO05D006156 1.4e-125 453.4 303 68.0
Manes.08G022601 Manihot esculenta HOM05D005095 ORTHO05D006156 2.4e-125 452.6 313 66.8
Oeu018347.1 Olea europaea HOM05D005095 ORTHO05D006156 3.2e-125 452.2 304 68.4
PSO339G4586 Papaver somniferum HOM05D005095 ORTHO05D006156 3.2e-125 452.2 303 68.0
vmacro07384 Vaccinium macrocarpon HOM05D005095 ORTHO05D006156 4.2e-125 451.8 302 70.2
FAN14G2314 Fragaria x ananassa HOM05D005095 ORTHO05D006156 1.2e-124 450.3 307 67.4
DCAR_007746 Daucus carota HOM05D005095 ORTHO05D006156 2.1e-124 449.5 308 68.5
unitig_578.g15761 Utricularia gibba HOM05D000146 ORTHO05D006156 2.7e-124 449.1 305 68.2
RcHm_v2.0_Chr3g0472431 Rosa chinensis HOM05D005095 ORTHO05D006156 4.6e-124 448.4 307 67.1
Eucgr.A01531 Eucalyptus grandis HOM05D005095 ORTHO05D006156 1.8e-123 446.4 300 69.7
EL10Ac7g16967 Beta vulgaris HOM05D005095 ORTHO05D006156 1.1e-122 443.7 298 67.4
MD14G1018000 Malus domestica HOM05D005095 ORTHO05D006156 1.5e-122 443.4 333 61.9
FAN09G4215 Fragaria x ananassa HOM05D005095 ORTHO05D006156 1.9e-122 443.0 307 67.1
RcHm_v2.0_Chr3g0472441 Rosa chinensis HOM05D005095 ORTHO05D006156 7.4e-122 441.0 307 66.8
SalBow3G2853 Salvia bowleyana HOM05D005095 ORTHO05D006156 1.1e-120 437.2 306 66.3
Gorai.009G405800 Gossypium raimondii HOM05D005095 ORTHO05D006156 1.4e-120 436.8 307 67.4
Nitab4.5_0004686g0040 Nicotiana tabacum HOM05D005095 ORTHO05D006156 4.0e-120 435.3 348 59.5
TAR369G0658 Trochodendron aralioides HOM05D005095 ORTHO05D006156 6.9e-120 434.5 307 65.1
Nitab4.5_0004686g0050 Nicotiana tabacum HOM05D005095 ORTHO05D006156 4.5e-119 431.8 304 65.5
Os04g0409500 Oryza sativa ssp. japonica HOM05D005095 ORTHO05D006156 1.4e-117 426.8 304 63.5
MELO3C009819.2 Cucumis melo HOM05D005095 ORTHO05D006156 2.4e-117 426.0 309 65.0
ATR0820G022 Amborella trichopoda HOM05D005095 ORTHO05D006156 3.5e-116 422.2 303 64.4
Ah.06g189990 Amaranthus hybridus HOM05D005095 ORTHO05D006156 1.8e-115 419.9 299 64.9
CsaV3_3G040830 Cucumis sativus L. HOM05D005095 ORTHO05D006156 2.3e-115 419.5 309 64.1
Zm00001eb421860 Zea mays HOM05D005095 ORTHO05D006156 3.0e-115 419.1 305 62.6
BolC5t34465H Brassica oleracea HOM05D005095 ORTHO05D006156 1.9e-114 416.4 253 76.7
BcaC05g29723 Brassica carinata HOM05D005095 ORTHO05D006156 6.2e-113 411.4 307 64.8
DCAR_013371 Daucus carota HOM05D005095 ORTHO05D006156 4.5e-111 405.2 321 61.4
AL3G21240 Arabidopsis lyrata HOM05D005095 ORTHO05D006156 1.3e-107 393.7 315 64.4
Sc02g0001070 Simmondsia chinensis HOM05D005095 ORTHO05D006156 1.8e-107 393.3 260 70.4
SEGI_28091 Sequoiadendron giganteum HOM05D005095 ORTHO05D006156 5.1e-107 391.7 297 63.3
ECA238G1993 Erigeron canadensis HOM05D005095 ORTHO05D006156 5.7e-106 388.3 303 61.7
Nn6g35008 Nelumbo nucifera HOM05D005095 ORTHO05D006156 2.6e-103 379.4 298 60.4
DCAR_013370 Daucus carota HOM05D005095 ORTHO05D006156 3.4e-103 379.0 307 59.6
Ah.06g189980 Amaranthus hybridus HOM05D005095 ORTHO05D006156 2.9e-102 375.9 301 59.8
DCAR_013372 Daucus carota HOM05D005095 ORTHO05D006156 5.5e-101 371.7 306 59.2
FvH4_6g18140 Fragaria vesca HOM05D005095 ORTHO05D006156 7.9e-100 367.9 250 67.2
Pp3c12_22780 Physcomitrium patens HOM05D005095 ORTHO05D006156 1.3e-97 360.5 309 54.0
AagrBONN_evm.TU.Sc2ySwM_117.2042 Anthoceros agrestis HOM05D005095 ORTHO05D006156 4.8e-97 358.6 298 56.4
Mapoly0100s0026 Marchantia polymorpha HOM05D005095 ORTHO05D006156 1.0e-94 350.9 301 55.8
Sed0010579 Sechium edule HOM05D005095 ORTHO05D006156 1.1e-93 347.4 250 62.8
Duzib093G0628 Durio zibethinus HOM05D005095 ORTHO05D006156 6.9e-88 328.2 305 56.1
SMO352G0026 Selaginella moellendorffii HOM05D005095 ORTHO05D006156 6.9e-88 328.2 312 51.0
CBR_g20302 Chara braunii HOM05D005095 ORTHO05D006156 1.1e-85 320.9 302 49.7
Gohir.D04G102500 Gossypium hirsutum HOM05D005095 ORTHO05D006156 4.2e-85 318.9 233 66.5
Gohir.A04G062650 Gossypium hirsutum HOM05D005095 ORTHO05D006156 3.0e-83 312.8 218 67.0
Solyc09g009170.4 Solanum lycopersicum HOM05D005095 ORTHO05D006156 1.7e-81 307.0 197 70.6
BcaC05g29512 Brassica carinata HOM05D005095 ORTHO05D006156 5.2e-75 285.4 170 77.1
GSVIVG01033803001 Vitis vinifera HOM05D005095 ORTHO05D006156 2.2e-73 280.0 185 68.6
Cc06_g05420 Coffea canephora HOM05D005095 ORTHO05D006156 1.8e-72 276.9 182 67.6
CDE02G4719 Ceratophyllum demersum HOM05D005095 ORTHO05D006156 2.6e-66 256.5 177 66.1
CAN.G397.3 Capsicum annuum HOM05D005095 ORTHO05D006156 3.7e-65 252.7 186 65.1
Medtr1g060850 Medicago truncatula HOM05D005095 ORTHO05D006156 1.1e-64 251.1 169 63.9
AL7G30480 Arabidopsis lyrata HOM05D005095 ORTHO05D006156 1.8e-56 223.8 119 85.7
Haze_19563 Corylus avellana HOM05D000103 ORTHO05D000049 1.7e-49 200.7 133 66.9
Glyma.10G067302 Glycine max HOM05D005095 ORTHO05D006156 3.7e-49 199.5 130 70.8
MD14G1017800 Malus domestica HOM05D005095 ORTHO05D006156 4.6e-47 192.6 143 62.2
MCO16G241 Micromonas commoda HOM05D005095 ORTHO05D006156 3.0e-46 189.9 282 41.8
Sabra02G0123600 Salix brachista HOM05D005095 ORTHO05D006156 1.8e-43 180.6 172 53.5
BcaB02g09662 Brassica carinata HOM05D005095 ORTHO05D006156 1.3e-38 164.5 159 55.3
Zm00001eb312570 Zea mays HOM05D005095 ORTHO05D006156 9.5e-37 158.3 121 57.9
Hund04015 Selenicereus undatus HOM05D005095 ORTHO05D006156 3.6e-36 156.4 115 60.9
HPP92_007823 Vanilla planifolia HOM05D005095 ORTHO05D006156 1.8e-35 154.1 129 59.7
Nn6g35009 Nelumbo nucifera HOM05D005095 ORTHO05D006156 1.5e-29 134.4 123 61.0
VMungo0720G1002 Vigna mungo HOM05D005095 ORTHO05D006156 2.4e-27 127.1 87 62.1
TAR628G0764 Trochodendron aralioides HOM05D005095 ORTHO05D006156 6.2e-20 102.4 71 63.4
Prupe.3G199100 Prunus persica HOM05D005095 ORTHO05D006156 9.0e-19 98.6 63 65.1
Zm00001eb198060 Zea mays HOM05D005095 ORTHO05D006156 5.4e-16 89.4 61 62.3
BcaC06g33893 Brassica carinata HOM05D005095 ORTHO05D092937 2.0e-10 70.9 35 91.4
MD04G1094600 Malus domestica HOM05D005095 ORTHO05D245281 3.4e-10 70.1 47 63.8
Sabra14G0058200 Salix brachista HOM05D005095 ORTHO05D006156 9.9e-10 68.6 101 42.6
Pp3c4_390 Physcomitrium patens HOM05D005095 ORTHO05D006156 1.2e-07 61.6 55 45.5


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