Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 7.8e-216 753.4 361 100.0
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 7.8e-216 753.4 361 100.0
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 7.8e-216 753.4 361 100.0
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.5e-214 749.2 361 99.2
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 1.2e-213 746.1 359 99.2
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 4.9e-210 734.2 361 96.7
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 5.1e-207 724.2 362 95.0
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 1.1e-204 716.5 361 93.9
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 2.4e-204 715.3 361 94.2
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.2e-203 713.0 361 93.9
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 4.4e-203 711.1 361 92.8
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 7.6e-203 710.3 359 94.2
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.9e-202 708.4 359 93.9
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 8.4e-202 706.8 359 93.6
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 6.0e-200 700.7 361 92.0
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 1.9e-190 669.1 359 87.7
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 4.3e-190 667.9 390 83.1
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 1.3e-186 656.4 338 93.5
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.0e-183 646.7 359 84.1
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 6.7e-183 644.0 358 83.5
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.1e-182 643.3 358 84.1
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 1.9e-182 642.5 359 83.0
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 1.3e-181 639.8 358 84.1
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 1.3e-181 639.8 359 83.3
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.6e-181 639.4 359 82.5
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 2.8e-181 638.6 359 83.0
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 3.7e-181 638.3 358 82.4
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 3.7e-181 638.3 358 83.0
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 4.8e-181 637.9 359 82.7
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 4.8e-181 637.9 359 82.5
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.8e-180 636.0 359 81.3
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 2.4e-180 635.6 359 82.7
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 6.9e-180 634.0 359 81.9
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 6.9e-180 634.0 359 82.2
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.5e-179 632.9 359 82.2
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.5e-179 632.9 359 82.2
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 2.6e-179 632.1 359 82.2
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 3.4e-179 631.7 359 81.9
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 4.5e-179 631.3 359 81.6
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 7.6e-179 630.6 359 81.9
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 7.6e-179 630.6 359 81.9
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.0e-178 630.2 359 81.9
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.0e-178 630.2 358 82.4
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 1.7e-178 629.4 359 82.7
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 2.2e-178 629.0 359 81.6
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 2.9e-178 628.6 359 82.5
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 2.9e-178 628.6 359 81.3
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 3.8e-178 628.2 358 82.4
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 6.5e-178 627.5 359 81.1
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 6.5e-178 627.5 359 80.5
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 6.5e-178 627.5 359 81.3
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 4.2e-177 624.8 359 81.1
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 4.2e-177 624.8 359 80.8
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 4.2e-177 624.8 359 81.3
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.1e-176 622.5 359 79.4
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 2.7e-176 622.1 358 81.6
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.7e-176 622.1 358 81.6
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 6.0e-176 620.9 358 81.3
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.3e-175 619.8 358 81.0
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 1.3e-175 619.8 359 81.3
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.8e-175 619.4 359 81.6
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 1.8e-175 619.4 358 81.0
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 3.0e-175 618.6 393 76.1
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 5.1e-175 617.8 359 80.2
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 1.1e-174 616.7 359 80.5
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 1.5e-174 616.3 359 79.1
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 5.7e-174 614.4 358 80.7
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 7.4e-174 614.0 385 76.1
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 7.4e-174 614.0 355 81.1
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 1.3e-173 613.2 359 79.9
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 2.8e-173 612.1 359 78.3
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 1.4e-172 609.8 358 79.6
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.8e-172 609.4 359 78.0
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 4.1e-172 608.2 359 78.3
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 5.3e-172 607.8 358 79.1
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 2.0e-171 605.9 358 77.1
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 3.4e-171 605.1 369 77.5
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 5.8e-171 604.4 358 78.2
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 2.2e-170 602.4 426 69.5
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 8.4e-170 600.5 359 76.9
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.9e-169 599.4 359 77.2
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 1.9e-169 599.4 359 76.9
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 3.2e-169 598.6 359 77.7
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.1e-168 595.9 401 71.8
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 4.6e-168 594.7 341 80.9
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 1.8e-167 592.8 417 70.3
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 5.7e-166 587.8 358 76.8
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 7.4e-166 587.4 358 77.4
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.4e-164 583.2 358 76.3
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 3.1e-164 582.0 358 75.7
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 4.1e-164 581.6 360 75.8
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 7.9e-160 567.4 360 74.7
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.5e-158 563.1 367 71.4
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 2.5e-158 562.4 357 72.5
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 1.7e-157 559.7 314 84.4
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 1.5e-155 553.1 367 68.9
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 6.3e-149 531.2 359 70.5
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 2.6e-147 525.8 359 68.8
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 2.1e-144 516.2 303 80.5
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 2.1e-144 516.2 357 68.1
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 3.6e-144 515.4 358 68.4
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 6.1e-144 514.6 313 78.3
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 2.6e-142 509.2 307 78.5
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 3.8e-138 495.4 348 70.4
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 4.7e-136 488.4 358 65.6
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 8.8e-135 484.2 404 60.6
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 6.1e-128 461.5 368 60.3
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 1.5e-126 456.8 250 86.0
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 3.5e-123 445.7 241 86.7
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 2.9e-122 442.6 359 61.3
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 5.0e-122 441.8 365 62.5
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 4.7e-112 408.7 206 94.2
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 8.0e-112 407.9 239 79.1
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 6.0e-99 365.2 212 78.8
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 3.5e-75 286.2 164 84.1
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.6e-59 234.2 153 69.3
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 3.8e-53 213.0 155 65.2
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.3e-50 204.5 120 75.0
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 1.9e-49 200.7 127 71.7
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 2.4e-47 193.7 324 38.6
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 3.2e-44 183.3 204 50.0
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 1.1e-36 158.3 98 78.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 2.2e-32 144.1 117 62.4
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 4.4e-25 119.8 56 92.9
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.3e-24 118.2 108 57.4
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 6.1e-19 99.4 162 42.0
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 6.1e-19 99.4 79 63.3
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 3.1e-15 87.0 39 92.3
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 7.7e-14 82.4 51 66.7
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 1.4e-07 61.6 202 29.2


User provided reference genes

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