Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 9.9e-86 320.1 162 100.0
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 5.7e-57 224.6 153 78.4
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 5.7e-57 224.6 153 78.4
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 1.6e-51 206.5 154 74.0
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 2.8e-48 195.7 154 71.4
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 8.2e-48 194.1 153 70.6
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 1.4e-47 193.4 154 70.8
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 6.9e-47 191.0 154 71.4
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 9.0e-47 190.7 154 70.8
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 9.0e-47 190.7 155 71.0
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 2.0e-46 189.5 154 70.8
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 4.5e-46 188.3 154 68.2
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 1.0e-45 187.2 154 69.5
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 1.7e-45 186.4 154 70.1
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 8.5e-45 184.1 156 66.7
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 8.5e-45 184.1 155 67.7
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 3.2e-44 182.2 155 69.7
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 4.2e-44 181.8 158 68.4
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 1.8e-39 166.4 155 63.9
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 2.6e-33 146.0 182 51.6
A05p35530 Brassica napus HOM05D006233 ORTHO05D007247 1.0e-29 134.0 92 75.0
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 2.2e-29 132.9 132 59.1
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 2.9e-29 132.5 157 51.6
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 3.8e-29 132.1 148 50.0
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 6.5e-29 131.3 149 52.3
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 6.5e-29 131.3 158 51.3
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 8.5e-29 131.0 156 51.9
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 1.9e-28 129.8 132 56.8
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 4.2e-28 128.6 138 53.6
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 5.5e-28 128.3 157 52.2
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 7.2e-28 127.9 153 50.3
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 9.4e-28 127.5 157 49.7
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 1.2e-27 127.1 157 50.3
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 1.2e-27 127.1 157 50.3
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 1.2e-27 127.1 155 49.0
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 1.6e-27 126.7 156 50.0
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 1.6e-27 126.7 157 49.0
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 2.1e-27 126.3 152 50.0
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 2.7e-27 125.9 160 51.2
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 3.6e-27 125.6 156 49.4
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 3.6e-27 125.6 156 49.4
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 4.7e-27 125.2 139 51.8
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 4.7e-27 125.2 155 49.0
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 1.0e-26 124.0 130 59.2
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.0e-26 124.0 156 48.7
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 1.0e-26 124.0 156 49.4
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 1.4e-26 123.6 158 49.4
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 2.3e-26 122.9 156 49.4
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 3.0e-26 122.5 121 56.2
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 6.7e-26 121.3 140 51.4
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 1.1e-25 120.6 155 47.1
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.5e-25 120.2 156 48.1
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 1.5e-25 120.2 157 47.1
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 2.0e-25 119.8 136 53.7
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 3.3e-25 119.0 138 52.9
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 5.7e-25 118.2 140 50.0
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 9.7e-25 117.5 140 50.0
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 9.7e-25 117.5 157 47.1
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 6.3e-24 114.8 136 50.0
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 1.8e-23 113.2 142 50.7
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 1.8e-23 113.2 142 50.7
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 1.8e-23 113.2 137 47.4
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 2.4e-23 112.8 163 47.9
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 5.3e-23 111.7 152 48.7
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 5.3e-23 111.7 156 48.1
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 7.0e-23 111.3 168 45.8
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 9.1e-23 110.9 146 43.8
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 9.1e-23 110.9 146 45.2
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 1.2e-22 110.5 117 53.8
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 1.6e-22 110.2 145 49.0
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 1.6e-22 110.2 162 46.9
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 2.0e-22 109.8 156 47.4
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 2.7e-22 109.4 131 51.1
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 3.5e-22 109.0 155 45.8
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 3.5e-22 109.0 153 47.7
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 4.5e-22 108.6 144 50.0
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 4.5e-22 108.6 155 45.8
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 5.9e-22 108.2 131 51.1
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 5.9e-22 108.2 159 42.8
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 1.0e-21 107.5 141 46.1
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 1.0e-21 107.5 157 47.8
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.3e-21 107.1 146 43.8
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 1.7e-21 106.7 132 47.7
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 2.2e-21 106.3 162 45.1
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 2.9e-21 105.9 148 47.3
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 3.8e-21 105.5 109 56.9
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 5.0e-21 105.1 128 50.8
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 6.5e-21 104.8 141 51.8
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 1.5e-20 103.6 119 49.6
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 1.5e-20 103.6 157 43.9
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 5.5e-20 101.7 161 46.0
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 2.1e-19 99.8 157 43.3
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 3.6e-19 99.0 135 44.4
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 1.4e-18 97.1 153 47.7
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 2.3e-18 96.3 133 43.6
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 6.8e-18 94.7 155 44.5
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 5.7e-17 91.7 158 42.4
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 7.5e-17 91.3 134 42.5
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 1.1e-15 87.4 120 49.2
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 1.8e-15 86.7 103 48.5
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 2.4e-15 86.3 136 41.9
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 1.6e-14 83.6 70 61.4
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 2.0e-14 83.2 56 73.2
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 2.7e-14 82.8 116 42.2
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 1.7e-13 80.1 116 42.2
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 7.2e-12 74.7 104 42.3
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 7.2e-12 74.7 132 39.4
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 8.0e-11 71.2 89 47.2
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 4.0e-10 68.9 52 63.5
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 8.8e-10 67.8 60 56.7
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 1.2e-09 67.4 74 51.4
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 4.4e-09 65.5 147 35.4
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 5.7e-09 65.1 136 33.8
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 7.5e-09 64.7 117 40.2
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 8.3e-08 61.2 77 42.9
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.4e-07 60.5 46 67.4
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 2.4e-07 59.7 58 50.0
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 3.1e-07 59.3 42 69.0
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 7.0e-07 58.2 125 36.8
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 9.2e-07 57.8 50 58.0
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 5.9e-06 55.1 76 40.8
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 7.7e-06 54.7 43 60.5


User provided reference genes

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