Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p53460 Brassica napus HOM05D002144 ORTHO05D002170 4.7e-54 214.2 100 100.0
BolC5t34023H Brassica oleracea HOM05D002144 ORTHO05D002170 4.7e-54 214.2 100 100.0
BraA05t22338Z Brassica rapa HOM05D002144 ORTHO05D002170 7.0e-50 200.3 101 95.0
A05p35280 Brassica napus HOM05D002144 ORTHO05D002170 9.5e-47 189.9 96 89.6
C01p50450 Brassica napus HOM05D002144 ORTHO05D002170 8.7e-32 140.2 91 72.5
BolC1t04997H Brassica oleracea HOM05D002144 ORTHO05D002170 8.7e-32 140.2 91 72.5
Sp3g12440 Schrenkiella parvula HOM05D002144 ORTHO05D002170 8.7e-32 140.2 85 81.2
BraA01t03992Z Brassica rapa HOM05D002144 ORTHO05D002170 2.5e-31 138.7 104 67.3
A01p39510 Brassica napus HOM05D002144 ORTHO05D002170 3.1e-29 131.7 87 73.6
AL3G26430 Arabidopsis lyrata HOM05D002144 ORTHO05D002170 4.9e-27 124.4 85 72.9
CARHR089060 Cardamine hirsuta HOM05D002144 ORTHO05D002170 4.9e-19 97.8 85 60.0
Carub.0003s1379 Capsella rubella HOM05D002144 ORTHO05D002170 1.9e-18 95.9 88 62.5
CARHR044400 Cardamine hirsuta HOM05D002144 ORTHO05D002170 6.0e-17 90.9 120 46.7
Aa31LG10G1360 Aethionema arabicum HOM05D000815 ORTHO05D000636 1.3e-16 89.7 116 48.3
Thhalv10011865m.g Eutrema salsugineum HOM05D002144 ORTHO05D002170 2.5e-15 85.5 122 44.3
AL1G62770 Arabidopsis lyrata HOM05D002144 ORTHO05D002170 3.3e-15 85.1 123 43.9
BcaB02g10863 Brassica carinata HOM05D002144 ORTHO05D002170 5.6e-15 84.3 115 43.5
A05p17730 Brassica napus HOM05D002144 ORTHO05D002170 5.6e-15 84.3 112 45.5
BraA05t20665Z Brassica rapa HOM05D002144 ORTHO05D002170 5.6e-15 84.3 112 45.5
BcaB07g33437 Brassica carinata HOM05D002144 ORTHO05D002170 1.6e-14 82.8 121 43.0
C06p15600 Brassica napus HOM05D002144 ORTHO05D002170 1.6e-14 82.8 112 44.6
BolC6t36748H Brassica oleracea HOM05D002144 ORTHO05D002170 6.2e-14 80.9 112 43.8
Carub.0001s4330 Capsella rubella HOM05D002144 ORTHO05D002170 6.2e-14 80.9 126 42.9
Sp1g40510 Schrenkiella parvula HOM05D001069 ORTHO05D002170 1.4e-13 79.7 91 50.5
BcaC08g44159 Brassica carinata HOM05D002144 ORTHO05D002170 9.0e-13 77.0 112 42.9
Gorai.009G144700 Gossypium raimondii HOM05D002144 ORTHO05D002170 4.5e-12 74.7 90 47.8
THA.LOC104822669 Tarenaya hassleriana HOM05D002144 ORTHO05D002170 4.5e-12 74.7 105 44.8
Gohir.D05G140350 Gossypium hirsutum HOM05D002144 ORTHO05D002170 5.8e-12 74.3 73 53.4
Gohir.A05G138200 Gossypium hirsutum HOM05D002144 ORTHO05D002170 7.6e-12 73.9 90 47.8
AT1G54070 Arabidopsis thaliana HOM05D002144 ORTHO05D002170 4.9e-11 71.2 123 40.7
GSVIVG01016701001 Vitis vinifera HOM05D002144 ORTHO05D002170 1.1e-10 70.1 94 45.7
Cpa.g.sc25.165 Carica papaya HOM05D002144 ORTHO05D002170 1.4e-10 69.7 87 46.0
Aa31LG8G1430 Aethionema arabicum HOM05D002144 ORTHO05D002170 4.2e-10 68.2 71 53.5
Duzib235G0612 Durio zibethinus HOM05D002144 ORTHO05D002170 4.2e-10 68.2 85 47.1
MBI19_g38000_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 5.5e-10 67.8 85 42.4
Dinv37840 Davidia involucrata HOM05D002144 ORTHO05D002170 1.6e-09 66.2 86 46.5
Haze_16090 Corylus avellana HOM05D002144 ORTHO05D002170 1.0e-08 63.5 82 47.6
TWI14G1240 Tripterygium wilfordii HOM05D002144 ORTHO05D002170 1.8e-08 62.8 81 45.7
TWI23G1155 Tripterygium wilfordii HOM05D002144 ORTHO05D002170 1.8e-08 62.8 96 43.8
COL.COLO4_30825 Corchorus olitorius HOM05D002144 ORTHO05D002170 6.7e-08 60.8 78 46.2
Manes.11G015300 Manihot esculenta HOM05D002144 ORTHO05D002170 8.7e-08 60.5 76 43.4
FvH4_6g35330 Fragaria vesca HOM05D002144 ORTHO05D002170 1.5e-07 59.7 89 40.4
FAN09G1588 Fragaria x ananassa HOM05D002144 ORTHO05D002170 1.5e-07 59.7 89 40.4
FAN14G0119 Fragaria x ananassa HOM05D002144 ORTHO05D002170 1.5e-07 59.7 89 40.4
Thecc.06G126600 Theobroma cacao HOM05D002144 ORTHO05D002170 1.5e-07 59.7 79 44.3
A06p00580 Brassica napus HOM05D000815 ORTHO05D000636 1.9e-07 59.3 71 47.9
C06p09860 Brassica napus HOM05D000815 ORTHO05D000636 1.9e-07 59.3 71 47.9
BolC6t36057H Brassica oleracea HOM05D000815 ORTHO05D000636 1.9e-07 59.3 71 47.9
BraA06t23272Z Brassica rapa HOM05D000815 ORTHO05D000636 1.9e-07 59.3 71 47.9
Duzib192G0893 Durio zibethinus HOM05D002144 ORTHO05D002170 2.5e-07 58.9 78 42.3
Potri.001G164800 Populus trichocarpa HOM05D002144 ORTHO05D002170 2.5e-07 58.9 79 45.6
Dinv20398 Davidia involucrata HOM05D002144 ORTHO05D002170 3.3e-07 58.5 95 42.1
Manes.04G148800 Manihot esculenta HOM05D002144 ORTHO05D002170 3.3e-07 58.5 76 43.4
ClCG09G001220 Citrullus lanatus HOM05D002144 ORTHO05D002170 5.7e-07 57.8 88 44.3
CiPaw.01G214500 Carya illinoinensis HOM05D002144 ORTHO05D002170 9.6e-07 57.0 71 45.1
PSO223G0021 Papaver somniferum HOM05D002144 ORTHO05D002170 1.3e-06 56.6 88 40.9
QL05p002979 Quercus lobata HOM05D002144 ORTHO05D002170 1.3e-06 56.6 90 41.1
CsaV3_7G034150 Cucumis sativus L. HOM05D002144 ORTHO05D002170 2.1e-06 55.8 88 44.3
Oeu008518.1 Olea europaea HOM05D002144 ORTHO05D002170 2.8e-06 55.5 80 41.2
Hma1.2p1_0229F.1_g096900 Hydrangea macrophylla HOM05D002144 ORTHO05D002170 3.7e-06 55.1 80 41.2
Sabra01G0128200 Salix brachista HOM05D002144 ORTHO05D002170 3.7e-06 55.1 81 38.3
Oeu059028.1 Olea europaea HOM05D002144 ORTHO05D002170 4.8e-06 54.7 76 43.4
PGR031G3340 Punica granatum HOM05D002144 ORTHO05D002170 4.8e-06 54.7 99 36.4
unitig_748.g8062 Utricularia gibba HOM05D002144 ORTHO05D002170 4.8e-06 54.7 82 40.2
CiPaw.02G133200 Carya illinoinensis HOM05D002144 ORTHO05D002170 6.2e-06 54.3 72 43.1
PGR119G1483 Punica granatum HOM05D002144 ORTHO05D002170 8.2e-06 53.9 95 37.9


User provided reference genes

Program Settings