Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 2.6e-59 231.9 118 100.0
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 7.5e-59 230.3 118 99.2
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 2.2e-58 228.8 118 98.3
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 2.2e-58 228.8 118 98.3
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 4.9e-58 227.6 118 97.5
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 3.2e-57 224.9 118 96.6
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 1.2e-56 223.0 118 96.6
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 1.6e-56 222.6 118 95.8
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 2.7e-56 221.9 114 99.1
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 2.3e-55 218.8 118 92.4
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 3.9e-55 218.0 118 91.5
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 3.9e-55 218.0 118 91.5
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 1.5e-54 216.1 118 90.7
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 1.5e-54 216.1 118 90.7
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 1.0e-52 209.9 113 92.0
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 1.0e-52 209.9 113 92.0
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 5.2e-52 207.6 107 99.1
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 8.9e-52 206.8 118 89.0
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 8.1e-45 183.7 99 93.9
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 8.9e-44 180.3 96 96.9
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 6.4e-42 174.1 107 85.0
C09p17510 Brassica napus HOM05D000353 ORTHO05D011975 1.1e-41 173.3 107 85.0
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 6.6e-39 164.1 119 68.9
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 8.6e-39 163.7 106 83.0
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 7.1e-33 144.1 96 83.3
BolC7t42422H Brassica oleracea HOM05D000353 ORTHO05D011975 1.6e-32 142.9 78 89.7
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 2.1e-29 132.5 118 55.9
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 2.1e-29 132.5 118 55.9
BcaC05g27208 Brassica carinata HOM05D000353 ORTHO05D011975 2.8e-29 132.1 70 91.4
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 4.7e-29 131.3 118 55.1
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 2.4e-28 129.0 118 54.2
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 5.2e-28 127.9 118 53.4
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 5.2e-28 127.9 118 53.4
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 8.9e-28 127.1 118 53.4
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 2.6e-27 125.6 118 53.4
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 2.6e-27 125.6 116 53.4
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 3.4e-27 125.2 118 52.5
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 3.4e-27 125.2 116 52.6
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 3.4e-27 125.2 116 53.4
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 3.4e-27 125.2 118 52.5
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 7.6e-27 124.0 118 53.4
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 1.3e-26 123.2 115 53.0
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 1.3e-26 123.2 116 52.6
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 1.7e-26 122.9 116 51.7
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 2.2e-26 122.5 116 52.6
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 2.9e-26 122.1 116 52.6
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 3.8e-26 121.7 116 51.7
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 8.4e-26 120.6 115 51.3
C07p19110 Brassica napus HOM05D000353 ORTHO05D011975 1.6e-24 116.3 62 90.3
BcaB01g02874 Brassica carinata HOM05D000353 ORTHO05D011975 2.7e-24 115.5 85 65.9
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 3.5e-24 115.2 110 52.7
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 2.3e-23 112.5 108 52.8
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 2.3e-23 112.5 108 52.8
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 3.0e-23 112.1 118 50.0
A05p21310 Brassica napus HOM05D000353 ORTHO05D042653 6.6e-23 110.9 118 56.8
BcaB05g22042 Brassica carinata HOM05D000353 ORTHO05D000199 3.6e-21 105.1 92 60.9
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 8.1e-21 104.0 118 47.5
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 1.8e-20 102.8 118 49.2
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 4.0e-20 101.7 106 50.9
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 9.0e-20 100.5 90 54.4
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 7.6e-19 97.4 118 47.5
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 7.6e-19 97.4 115 45.2
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 9.9e-19 97.1 108 48.1
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 2.9e-18 95.5 94 48.9
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 6.4e-18 94.4 96 53.1
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 1.1e-17 93.6 118 44.1
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 1.1e-17 93.6 94 47.9
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 1.4e-17 93.2 118 39.8
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 1.9e-17 92.8 115 45.2
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 3.2e-17 92.0 118 39.8
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 3.2e-17 92.0 118 39.8
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 4.2e-17 91.7 118 39.8
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 4.2e-17 91.7 86 50.0
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 1.2e-16 90.1 118 38.1
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 1.2e-16 90.1 86 48.8
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 4.6e-16 88.2 118 39.0
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 1.0e-15 87.0 94 46.8
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 1.3e-15 86.7 117 43.6
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 3.9e-15 85.1 95 46.3
BcaC05g29110 Brassica carinata HOM05D000353 ORTHO05D039625 3.9e-15 85.1 80 55.0
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 3.9e-15 85.1 85 52.9
BolC9t55252H Brassica oleracea HOM05D000353 ORTHO05D042653 6.7e-15 84.3 43 97.7
BraA05t21039Z Brassica rapa HOM05D000353 ORTHO05D011975 6.7e-15 84.3 42 95.2
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 8.7e-15 84.0 118 42.4
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 8.7e-15 84.0 110 41.8
C09p64180 Brassica napus HOM05D000353 ORTHO05D039625 8.7e-15 84.0 78 52.6
C05p37600 Brassica napus HOM05D000353 ORTHO05D040703 3.3e-14 82.0 63 61.9
BcaB08g35178 Brassica carinata HOM05D000353 ORTHO05D032815 9.6e-14 80.5 80 52.5
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 1.6e-13 79.7 101 48.5
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 3.7e-13 78.6 96 44.8
BcaC09g50234 Brassica carinata HOM05D000353 ORTHO05D005681 3.7e-13 78.6 89 50.6
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 3.1e-12 75.5 105 38.1
BolC5t32499H Brassica oleracea HOM05D000353 ORTHO05D040703 4.0e-12 75.1 55 65.5
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 2.6e-11 72.4 106 39.6
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 3.4e-11 72.0 110 36.4
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 7.6e-11 70.9 110 34.5
BcaB07g33228 Brassica carinata HOM05D000353 ORTHO05D023971 8.4e-10 67.4 98 37.8
C06p00360 Brassica napus HOM05D000353 ORTHO05D032815 2.4e-09 65.9 56 57.1
BcaB04g17355 Brassica carinata HOM05D000353 ORTHO05D005681 5.5e-09 64.7 117 35.9
BcaB01g01176 Brassica carinata HOM05D000353 ORTHO05D092964 9.3e-09 63.9 73 39.7
BolC6t35166H Brassica oleracea HOM05D000353 ORTHO05D032815 1.2e-08 63.5 56 55.4
BcaB06g26120 Brassica carinata HOM05D000353 ORTHO05D013242 1.6e-08 63.2 63 46.0
BcaNung05687 Brassica carinata HOM05D000353 ORTHO05D013242 7.9e-08 60.8 73 42.5
A08p10030 Brassica napus HOM05D000353 ORTHO05D033592 7.9e-08 60.8 91 38.5
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 1.8e-07 59.7 111 30.6
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 2.3e-07 59.3 98 32.7
BraA08t32999Z Brassica rapa HOM05D000353 ORTHO05D033592 2.3e-07 59.3 86 38.4
BcaB05g23079 Brassica carinata HOM05D000353 ORTHO05D013242 3.0e-07 58.9 69 44.9
BcaB04g18091 Brassica carinata HOM05D000353 ORTHO05D013242 3.9e-07 58.5 72 43.1
A07p09370 Brassica napus HOM05D025466 ORTHO05D013242 6.7e-07 57.8 50 56.0
BraA07t28733Z Brassica rapa HOM05D025466 ORTHO05D013242 6.7e-07 57.8 50 56.0
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 8.7e-07 57.4 111 31.5
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-06 57.0 111 30.6
BcaB07g31315 Brassica carinata HOM05D000353 ORTHO05D093832 1.1e-06 57.0 39 66.7
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-06 56.6 109 33.9
BcaB05g23573 Brassica carinata HOM05D000589 ORTHO05D013242 1.9e-06 56.2 94 37.2
BcaB06g26938 Brassica carinata HOM05D000353 ORTHO05D013242 1.9e-06 56.2 75 44.0
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 3.3e-06 55.5 111 30.6
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 7.4e-06 54.3 111 30.6
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 9.6e-06 53.9 108 28.7


User provided reference genes

Program Settings