Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 1.2e-59 233.0 118 100.0
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 6.4e-58 227.3 118 97.5
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 1.8e-57 225.7 118 96.6
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 1.8e-57 225.7 118 96.6
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 3.2e-57 224.9 118 96.6
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 4.1e-57 224.6 118 95.8
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 1.2e-56 223.0 118 95.8
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 1.3e-55 219.5 118 94.1
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 3.9e-55 218.0 118 95.8
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 1.9e-54 215.7 118 90.7
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 3.3e-54 214.9 118 89.8
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 3.3e-54 214.9 118 89.8
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 1.2e-53 213.0 118 89.0
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 1.2e-53 213.0 118 89.0
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 2.3e-52 208.8 113 91.2
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 2.3e-52 208.8 118 89.0
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 2.3e-52 208.8 113 91.2
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-51 206.5 107 98.1
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 5.2e-44 181.0 99 91.9
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 7.5e-43 177.2 96 94.8
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 9.8e-43 176.8 107 86.0
C09p17510 Brassica napus HOM05D000353 ORTHO05D011975 2.4e-41 172.2 107 84.1
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 5.6e-38 161.0 119 67.2
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 9.5e-38 160.2 106 81.1
BolC7t42422H Brassica oleracea HOM05D000353 ORTHO05D011975 2.1e-32 142.5 78 89.7
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 7.8e-32 140.6 96 81.2
BcaC05g27208 Brassica carinata HOM05D000353 ORTHO05D011975 3.6e-29 131.7 70 91.4
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 1.8e-28 129.4 118 54.2
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 1.8e-28 129.4 118 54.2
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 3.1e-28 128.6 118 53.4
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 3.1e-28 128.6 118 53.4
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 4.0e-28 128.3 118 53.4
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 5.2e-28 127.9 118 53.4
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 1.5e-27 126.3 118 53.4
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 1.5e-27 126.3 116 53.4
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 2.0e-27 125.9 118 52.5
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 2.0e-27 125.9 116 52.6
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 2.0e-27 125.9 116 53.4
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 4.4e-27 124.8 118 53.4
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 7.6e-27 124.0 115 53.0
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 7.6e-27 124.0 116 52.6
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 9.9e-27 123.6 116 52.6
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 9.9e-27 123.6 116 51.7
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 1.3e-26 123.2 116 52.6
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 1.7e-26 122.9 116 52.6
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 2.9e-26 122.1 118 50.8
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 2.9e-26 122.1 118 50.8
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 4.9e-26 121.3 115 51.3
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 5.4e-25 117.9 110 53.6
C07p19110 Brassica napus HOM05D000353 ORTHO05D011975 2.1e-24 115.9 62 90.3
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 3.5e-24 115.2 108 53.7
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 3.5e-24 115.2 108 53.7
BcaB01g02874 Brassica carinata HOM05D000353 ORTHO05D011975 6.0e-24 114.4 85 64.7
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 2.3e-23 112.5 118 50.0
A05p21310 Brassica napus HOM05D000353 ORTHO05D042653 8.7e-23 110.5 118 55.9
BcaB05g22042 Brassica carinata HOM05D000353 ORTHO05D000199 7.3e-22 107.5 92 60.9
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 4.8e-21 104.8 118 47.5
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 4.8e-21 104.8 106 51.9
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 1.4e-20 103.2 118 48.3
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 3.4e-19 98.6 118 47.5
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 4.5e-19 98.2 90 52.2
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 5.8e-19 97.8 108 48.1
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 9.9e-19 97.1 96 54.2
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 3.8e-18 95.1 115 44.3
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 8.4e-18 94.0 94 47.9
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 1.1e-17 93.6 118 40.7
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 1.1e-17 93.6 118 40.7
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 2.4e-17 92.4 118 43.2
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 3.2e-17 92.0 118 39.8
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 3.2e-17 92.0 94 46.8
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 9.3e-17 90.5 118 39.8
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 9.3e-17 90.5 115 44.3
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 9.3e-17 90.5 86 50.0
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 1.6e-16 89.7 118 39.8
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 2.7e-16 89.0 118 38.1
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 2.7e-16 89.0 86 48.8
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 1.0e-15 87.0 94 45.7
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 3.9e-15 85.1 95 45.3
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 3.9e-15 85.1 117 42.7
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 6.7e-15 84.3 85 51.8
BraA05t21039Z Brassica rapa HOM05D000353 ORTHO05D011975 8.7e-15 84.0 42 95.2
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 1.1e-14 83.6 110 41.8
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-14 83.2 101 49.5
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 1.9e-14 82.8 118 41.5
BcaC05g29110 Brassica carinata HOM05D000353 ORTHO05D039625 1.9e-14 82.8 80 52.5
C09p64180 Brassica napus HOM05D000353 ORTHO05D039625 4.3e-14 81.6 78 50.0
BolC9t55252H Brassica oleracea HOM05D000353 ORTHO05D042653 4.3e-14 81.6 43 93.0
BcaC09g50234 Brassica carinata HOM05D000353 ORTHO05D005681 5.6e-14 81.3 74 56.8
C05p37600 Brassica napus HOM05D000353 ORTHO05D040703 7.4e-14 80.9 63 60.3
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 4.8e-13 78.2 96 43.8
BcaB08g35178 Brassica carinata HOM05D000353 ORTHO05D032815 4.8e-13 78.2 80 50.0
BolC5t32499H Brassica oleracea HOM05D000353 ORTHO05D040703 9.0e-12 73.9 55 63.6
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 2.6e-11 72.4 105 36.2
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 3.4e-11 72.0 110 36.4
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 4.5e-11 71.6 106 38.7
BcaB07g33228 Brassica carinata HOM05D000353 ORTHO05D023971 1.7e-10 69.7 102 38.2
C06p00360 Brassica napus HOM05D000353 ORTHO05D032815 1.1e-09 67.0 56 57.1
BolC6t35166H Brassica oleracea HOM05D000353 ORTHO05D032815 5.5e-09 64.7 56 55.4
BcaB04g17355 Brassica carinata HOM05D000353 ORTHO05D005681 7.1e-09 64.3 117 35.0
BcaB01g01176 Brassica carinata HOM05D000353 ORTHO05D092964 9.3e-09 63.9 73 39.7
BcaB06g26120 Brassica carinata HOM05D000353 ORTHO05D013242 1.6e-08 63.2 63 44.4
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 4.6e-08 61.6 102 33.3
A08p10030 Brassica napus HOM05D000353 ORTHO05D033592 1.0e-07 60.5 91 38.5
BcaNung05687 Brassica carinata HOM05D000353 ORTHO05D013242 1.3e-07 60.1 73 41.1
BraA08t32999Z Brassica rapa HOM05D000353 ORTHO05D033592 2.3e-07 59.3 86 38.4
A07p09370 Brassica napus HOM05D025466 ORTHO05D013242 5.1e-07 58.2 50 56.0
BraA07t28733Z Brassica rapa HOM05D025466 ORTHO05D013242 5.1e-07 58.2 50 56.0
BcaB05g23079 Brassica carinata HOM05D000353 ORTHO05D013242 6.7e-07 57.8 69 43.5
BcaB04g18091 Brassica carinata HOM05D000353 ORTHO05D013242 8.7e-07 57.4 72 41.7
BcaB07g31315 Brassica carinata HOM05D000353 ORTHO05D093832 1.1e-06 57.0 39 66.7
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 1.5e-06 56.6 111 29.7
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 1.9e-06 56.2 111 28.8
BcaB05g23573 Brassica carinata HOM05D000589 ORTHO05D013242 3.3e-06 55.5 94 36.2
BcaB06g26938 Brassica carinata HOM05D000353 ORTHO05D013242 3.3e-06 55.5 75 42.7
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 9.6e-06 53.9 111 29.7


User provided reference genes

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