Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33965H Brassica oleracea HOM05D010764 ORTHO05D016724 1.1e-127 459.9 232 100.0
BcaC05g29079 Brassica carinata HOM05D010764 ORTHO05D016724 5.4e-93 344.7 183 97.3
BcaC08g42936 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-51 206.1 168 63.7
BcaC07g38676 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-50 204.1 192 57.3
BolC7t45625H Brassica oleracea HOM05D010764 ORTHO05D016724 2.4e-48 196.4 223 52.5
BcaC01g00333 Brassica carinata HOM05D010764 ORTHO05D003091 5.3e-48 195.3 226 50.0
BcaC03g17398 Brassica carinata HOM05D000003 ORTHO05D000006 7.6e-47 191.4 182 59.3
A06p43710 Brassica napus HOM05D000496 ORTHO05D000411 1.4e-45 187.2 176 55.7
BcaB05g24571 Brassica carinata HOM05D000003 ORTHO05D000006 4.2e-45 185.7 161 60.2
BolC1t01721H Brassica oleracea HOM05D000496 ORTHO05D000411 2.7e-44 183.0 215 49.3
BolC7t42883H Brassica oleracea HOM05D000496 ORTHO05D000411 6.2e-41 171.8 145 59.3
BcaB02g10222 Brassica carinata HOM05D000106 ORTHO05D000160 3.1e-40 169.5 187 51.9
BcaB06g28004 Brassica carinata HOM05D000003 ORTHO05D000006 1.2e-39 167.5 179 53.6
BcaC05g25046 Brassica carinata HOM05D010764 ORTHO05D016724 4.9e-38 162.2 171 57.3
C06p17800 Brassica napus HOM05D010764 ORTHO05D016724 3.0e-35 152.9 145 57.9
BcaC02g07975 Brassica carinata HOM05D010764 ORTHO05D016724 6.7e-35 151.8 189 51.9
C05p04150 Brassica napus HOM05D000496 ORTHO05D000411 8.7e-35 151.4 103 69.9
C06p28390 Brassica napus HOM05D000496 ORTHO05D000411 1.9e-34 150.2 114 65.8
BcaB07g30348 Brassica carinata HOM05D010764 ORTHO05D016724 2.1e-33 146.7 189 47.6
BolC9t59648H Brassica oleracea HOM05D000759 ORTHO05D000574 2.1e-33 146.7 89 75.3
C02p47150 Brassica napus HOM05D010764 ORTHO05D016724 3.7e-33 146.0 199 47.7
A02p15120 Brassica napus HOM05D009214 ORTHO05D013521 1.2e-31 141.0 133 54.9
C02p20270 Brassica napus HOM05D009214 ORTHO05D000411 3.8e-30 136.0 133 53.4
A03p57130 Brassica napus HOM05D009214 ORTHO05D000411 4.9e-30 135.6 114 57.9
BolC7t42162H Brassica oleracea HOM05D009214 ORTHO05D013521 4.9e-30 135.6 92 69.6
BcaB02g11325 Brassica carinata HOM05D009214 ORTHO05D013521 1.1e-29 134.4 222 42.8
C02p52220 Brassica napus HOM05D009214 ORTHO05D013521 3.2e-29 132.9 91 67.0
BolC3t21595H Brassica oleracea HOM05D000496 ORTHO05D000411 4.2e-29 132.5 89 70.8
BraA03t09650Z Brassica rapa HOM05D000496 ORTHO05D000411 3.5e-28 129.4 130 53.8
C03p32630 Brassica napus HOM05D000496 ORTHO05D000411 6.0e-28 128.6 137 52.6
BolC5t34388H Brassica oleracea HOM05D009214 ORTHO05D000411 1.0e-27 127.9 171 45.0
BcaC03g17805 Brassica carinata HOM05D009214 ORTHO05D013521 1.8e-27 127.1 254 39.0
C02p51670 Brassica napus HOM05D009214 ORTHO05D000411 8.7e-27 124.8 97 61.9
BcaC07g37122 Brassica carinata HOM05D009214 ORTHO05D027576 5.7e-26 122.1 147 48.3
BcaC09g48986 Brassica carinata HOM05D019368 ORTHO05D024471 7.4e-26 121.7 197 42.6
C06p05580 Brassica napus HOM05D009214 ORTHO05D013521 7.4e-26 121.7 228 38.6
BcaC08g47582 Brassica carinata HOM05D010764 ORTHO05D016724 1.6e-25 120.6 168 45.2
BolC6t35665H Brassica oleracea HOM05D009214 ORTHO05D013521 2.8e-25 119.8 231 37.7
BolC9t57397H Brassica oleracea HOM05D009214 ORTHO05D013521 6.3e-25 118.6 103 55.3
BolC2t11019H Brassica oleracea HOM05D009214 ORTHO05D013521 1.2e-23 114.4 120 51.7
BolC9t58221H Brassica oleracea HOM05D009214 ORTHO05D013521 1.2e-23 114.4 77 67.5
A05p25540 Brassica napus HOM05D009214 ORTHO05D013521 3.8e-22 109.4 135 48.9
BolC9t57656H Brassica oleracea HOM05D000496 ORTHO05D000411 7.2e-21 105.1 48 97.9
C06p01420 Brassica napus HOM05D000003 ORTHO05D000006 2.8e-17 93.2 70 62.9
BcaC04g23888 Brassica carinata HOM05D011474 ORTHO05D027115 4.8e-17 92.4 94 48.9
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-17 91.7 138 41.3
A04p11750 Brassica napus HOM05D009214 ORTHO05D024265 1.4e-16 90.9 149 40.9
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-16 88.6 179 38.0
A09p12700 Brassica napus HOM05D011474 ORTHO05D016098 9.1e-16 88.2 142 43.0
C05p16970 Brassica napus HOM05D009214 ORTHO05D024265 9.1e-16 88.2 138 42.0
A02p27000 Brassica napus HOM05D009214 ORTHO05D016098 2.0e-15 87.0 181 35.4
BraA02t07715Z Brassica rapa HOM05D010185 ORTHO05D016098 2.0e-15 87.0 181 35.4
BcaC08g42860 Brassica carinata HOM05D011474 ORTHO05D027115 2.6e-15 86.7 94 45.7
C05p39170 Brassica napus HOM05D000496 ORTHO05D000411 2.6e-15 86.7 105 43.8
BolC9t58563H Brassica oleracea HOM05D009521 ORTHO05D000411 3.4e-15 86.3 105 41.0
BraA06t26209Z Brassica rapa HOM05D010185 ORTHO05D015459 3.4e-15 86.3 124 39.5
BcaB04g17684 Brassica carinata HOM05D000003 ORTHO05D021670 7.7e-15 85.1 145 38.6
BcaB01g05566 Brassica carinata HOM05D009214 ORTHO05D000411 1.3e-14 84.3 67 62.7
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-14 84.3 208 32.2
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-14 84.0 87 44.8
BolC4t25083H Brassica oleracea HOM05D009214 ORTHO05D024265 3.8e-14 82.8 138 40.6
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 1.1e-13 81.3 234 31.2
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-13 80.9 148 33.8
BraA04t15790Z Brassica rapa HOM05D009214 ORTHO05D027438 1.9e-13 80.5 88 44.3
BcaNung00851 Brassica carinata HOM05D010764 ORTHO05D016724 4.2e-13 79.3 100 53.0
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-12 76.6 87 41.4
BolC5t29151H Brassica oleracea HOM05D000496 ORTHO05D016098 2.7e-12 76.6 206 32.0
BolC6t35268H Brassica oleracea HOM05D009521 ORTHO05D013247 6.1e-12 75.5 203 31.0
BolC7t43207H Brassica oleracea HOM05D000496 ORTHO05D000411 6.1e-12 75.5 150 32.7
BcaC08g43151 Brassica carinata HOM05D009214 ORTHO05D000411 7.9e-12 75.1 48 70.8
BcaC03g15116 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-11 74.3 120 40.0
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 2.3e-11 73.6 154 32.5
BolC3t20253H Brassica oleracea HOM05D010185 ORTHO05D016098 3.0e-11 73.2 83 45.8
BraA02t05709Z Brassica rapa HOM05D011474 ORTHO05D016098 3.9e-11 72.8 131 42.0
BcaB08g34738 Brassica carinata HOM05D010185 ORTHO05D016098 5.1e-11 72.4 96 43.8
BcaC06g36207 Brassica carinata HOM05D000003 ORTHO05D015459 5.1e-11 72.4 209 30.6
C07p06470 Brassica napus HOM05D010185 ORTHO05D015459 5.1e-11 72.4 209 30.6
BolC5t34093H Brassica oleracea HOM05D010185 ORTHO05D000411 5.1e-11 72.4 82 45.1
A01p35560 Brassica napus HOM05D010185 ORTHO05D015459 6.7e-11 72.0 224 28.6
BcaB05g25017 Brassica carinata HOM05D011474 ORTHO05D000006 8.8e-11 71.6 222 27.9
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-10 70.9 165 30.3
BolC8t50915H Brassica oleracea HOM05D009521 ORTHO05D013247 1.5e-10 70.9 210 32.9
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 2.0e-10 70.5 144 31.9
C06p38500 Brassica napus HOM05D009214 ORTHO05D000411 2.0e-10 70.5 154 37.7
BolC7t44560H Brassica oleracea HOM05D000496 ORTHO05D000411 2.6e-10 70.1 110 40.9
BolC8t49529H Brassica oleracea HOM05D000496 ORTHO05D000411 2.6e-10 70.1 65 49.2
BolC5t31358H Brassica oleracea HOM05D010185 ORTHO05D015459 3.3e-10 69.7 83 43.4
BraA07t28028Z Brassica rapa HOM05D010185 ORTHO05D015459 3.3e-10 69.7 154 36.4
Thhalv10002806m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.3e-10 69.7 116 37.1
Sp7g02720 Schrenkiella parvula HOM05D009214 ORTHO05D000411 5.7e-10 68.9 194 32.0
BolC2t11809H Brassica oleracea HOM05D000496 ORTHO05D000411 7.4e-10 68.6 244 29.9
BcaB02g10743 Brassica carinata HOM05D010185 ORTHO05D000006 1.7e-09 67.4 171 30.4
C03p80010 Brassica napus HOM05D010185 ORTHO05D016098 1.7e-09 67.4 123 38.2
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-09 66.6 148 29.7
BraA04t16683Z Brassica rapa HOM05D000496 ORTHO05D000411 2.8e-09 66.6 227 29.5
BcaC07g37007 Brassica carinata HOM05D000496 ORTHO05D021670 3.7e-09 66.2 217 29.5
BolC8t46808H Brassica oleracea HOM05D010185 ORTHO05D000411 4.8e-09 65.9 93 39.8
Thhalv10029191m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.8e-09 65.9 168 31.5
BcaB01g06142 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-09 65.5 134 29.9
BcaC03g17105 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-09 65.5 88 39.8
BcaC04g21213 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-09 65.1 238 26.9
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 8.2e-09 65.1 207 30.0
BolC8t47004H Brassica oleracea HOM05D009521 ORTHO05D013247 8.2e-09 65.1 133 35.3
BolC9t57308H Brassica oleracea HOM05D010185 ORTHO05D015459 1.1e-08 64.7 216 26.9
BcaNung04087 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-08 64.3 146 31.5
BcaC04g20372 Brassica carinata HOM05D010185 ORTHO05D015459 1.8e-08 63.9 216 26.4
C05p29730 Brassica napus HOM05D009521 ORTHO05D013247 3.1e-08 63.2 164 31.1
BcaC02g11021 Brassica carinata HOM05D000003 ORTHO05D000925 5.3e-08 62.4 76 42.1
BraA08t32635Z Brassica rapa HOM05D010185 ORTHO05D015459 1.2e-07 61.2 211 28.0
BcaB04g17578 Brassica carinata HOM05D009521 ORTHO05D021670 1.5e-07 60.8 83 42.2
BcaC08g43243 Brassica carinata HOM05D000003 ORTHO05D013247 2.6e-07 60.1 202 25.7
A03p15520 Brassica napus HOM05D010185 ORTHO05D015459 2.6e-07 60.1 239 27.6
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-07 59.7 208 27.9
C03p90150 Brassica napus HOM05D009521 ORTHO05D000411 3.4e-07 59.7 115 33.0
BcaB01g00821 Brassica carinata HOM05D010185 ORTHO05D015459 4.5e-07 59.3 175 31.4
BraA01t04229Z Brassica rapa HOM05D000003 ORTHO05D000006 1.3e-06 57.8 106 35.8
A04p28190 Brassica napus HOM05D010185 ORTHO05D016098 1.7e-06 57.4 130 33.8
BcaB07g34202 Brassica carinata HOM05D009214 ORTHO05D013521 2.9e-06 56.6 62 51.6
BolC6t35884H Brassica oleracea HOM05D000496 ORTHO05D013247 5.0e-06 55.8 238 28.6
Thhalv10003487m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.5e-06 55.1 61 41.0
Thhalv10027498m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.5e-06 55.1 49 44.9


User provided reference genes

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