Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33806H Brassica oleracea HOM05D007722 ORTHO05D009730 3.0e-62 241.9 140 100.0
A05p33600 Brassica napus HOM05D000020 ORTHO05D000543 1.6e-44 183.0 134 82.8
BraA05t22184Z Brassica rapa HOM05D000771 ORTHO05D001963 5.8e-42 174.5 136 83.1
BcaC05g28932 Brassica carinata HOM05D000020 ORTHO05D000543 2.7e-31 139.0 102 87.3
C05p50590 Brassica napus HOM05D000020 ORTHO05D000543 2.7e-31 139.0 102 87.3
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 1.3e-28 130.2 105 80.0
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 4.0e-27 125.2 105 77.1
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 2.0e-26 122.9 106 76.4
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 1.7e-25 119.8 103 64.1
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 2.2e-25 119.4 106 73.6
BolC1t04820H Brassica oleracea HOM05D000771 ORTHO05D001963 2.2e-25 119.4 106 73.6
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 4.9e-25 118.2 106 75.5
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 4.9e-25 118.2 106 67.0
C01p48660 Brassica napus HOM05D000771 ORTHO05D001963 1.1e-24 117.1 106 73.6
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 3.3e-21 105.5 103 66.0
AL3G28440 Arabidopsis lyrata HOM05D007722 ORTHO05D009730 4.5e-18 95.1 96 65.6
AT3G15780 Arabidopsis thaliana HOM05D007722 ORTHO05D009730 1.3e-17 93.6 96 67.7
Aa31LG8G2980 Aethionema arabicum HOM05D007722 ORTHO05D009730 1.7e-17 93.2 116 54.3
BcaB06g25688 Brassica carinata HOM05D000020 ORTHO05D001963 5.3e-11 71.6 103 59.2
AL1G60800 Arabidopsis lyrata HOM05D007722 ORTHO05D009730 9.0e-11 70.9 113 52.2
AT1G52550 Arabidopsis thaliana HOM05D007722 ORTHO05D009730 1.5e-10 70.1 111 50.5
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 1.3e-09 67.0 113 47.8
Thhalv10011859m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 8.5e-09 64.3 110 48.2
CARHR042660 Cardamine hirsuta HOM05D007722 ORTHO05D009730 3.2e-08 62.4 113 47.8
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 3.2e-08 62.4 115 49.6
Carub.0001s4151 Capsella rubella HOM05D007722 ORTHO05D009730 9.3e-08 60.8 113 46.9


User provided reference genes

Program Settings