Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33664H Brassica oleracea HOM05D003839 ORTHO05D032372 3.1e-25 117.5 52 100.0
C05p49230 Brassica napus HOM05D003839 ORTHO05D032372 9.1e-25 115.9 52 98.1
BcaB05g23090 Brassica carinata HOM05D003839 ORTHO05D032372 1.4e-12 75.5 45 75.6
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-09 63.9 40 70.0
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 4.1e-09 63.9 40 70.0
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 4.1e-09 63.9 40 70.0
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 2.7e-08 61.2 45 60.0
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 2.5e-06 54.7 45 55.6
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-06 54.3 45 55.6
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-06 54.3 42 59.5
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-06 54.3 42 59.5
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 3.2e-06 54.3 45 55.6
BolC5t34293H Brassica oleracea HOM05D021406 ORTHO05D020172 3.2e-06 54.3 45 55.6
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 3.2e-06 54.3 42 59.5
C07p29940 Brassica napus HOM05D003839 ORTHO05D003352 4.2e-06 53.9 46 47.8
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 7.2e-06 53.1 45 53.3
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 7.2e-06 53.1 45 48.9
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 9.5e-06 52.8 45 53.3
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 9.5e-06 52.8 44 56.8
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 9.5e-06 52.8 45 53.3
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 9.5e-06 52.8 44 56.8


User provided reference genes

Program Settings