Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 2.7e-152 542.0 275 100.0
BolC5t33635H Brassica oleracea HOM05D008838 ORTHO05D017578 2.7e-152 542.0 275 100.0
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 4.6e-144 514.6 275 95.3
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 4.6e-144 514.6 275 95.3
BolC6t37094H Brassica oleracea HOM05D008838 ORTHO05D017578 3.9e-143 511.5 275 94.9
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 2.1e-136 489.2 275 91.6
BraA08t34215Z Brassica rapa HOM05D008838 ORTHO05D017578 5.3e-132 474.6 275 88.0
BolC5t32400H Brassica oleracea HOM05D008838 ORTHO05D017578 1.6e-115 419.9 230 92.6
BolC5t32401H Brassica oleracea HOM05D008838 ORTHO05D017578 3.8e-114 415.2 230 92.6
A04p22210 Brassica napus HOM05D016807 ORTHO05D021876 1.0e-34 151.4 289 39.4
A03p26800 Brassica napus HOM05D016807 ORTHO05D021876 1.3e-34 151.0 289 39.4
BraA03t11891Z Brassica rapa HOM05D016807 ORTHO05D021876 3.4e-30 136.3 277 38.6
BcaB01g01348 Brassica carinata HOM05D008838 ORTHO05D021876 5.9e-30 135.6 288 37.5
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 5.5e-28 129.0 210 41.4
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 3.0e-26 123.2 286 36.4
BcaB07g32738 Brassica carinata HOM05D008838 ORTHO05D092174 5.1e-26 122.5 213 39.4
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 5.7e-25 119.0 296 34.5
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 7.4e-25 118.6 128 53.9
BcaB06g27480 Brassica carinata HOM05D008838 ORTHO05D021876 1.3e-24 117.9 218 39.4
BcaC06g35711 Brassica carinata HOM05D008838 ORTHO05D039997 3.4e-22 109.8 119 52.9
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 1.7e-21 107.5 179 41.3
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 2.9e-21 106.7 167 42.5
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 2.9e-21 106.7 167 42.5
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 8.5e-21 105.1 171 40.4
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 8.5e-21 105.1 171 40.4
BraA07t29803Z Brassica rapa HOM05D008838 ORTHO05D024146 1.2e-19 101.3 64 78.1
BcaC06g35569 Brassica carinata HOM05D008838 ORTHO05D027188 8.8e-18 95.1 75 65.3
BcaB04g17340 Brassica carinata HOM05D009418 ORTHO05D009842 1.1e-17 94.7 118 48.3
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 3.3e-17 93.2 158 39.2
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 3.3e-17 93.2 76 65.8
BcaC09g48466 Brassica carinata HOM05D008838 ORTHO05D011792 4.4e-17 92.8 76 65.8
C04p58410 Brassica napus HOM05D009418 ORTHO05D017574 5.7e-17 92.4 299 31.1
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 9.7e-17 91.7 234 32.1
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 1.7e-16 90.9 304 31.9
BcaB02g06726 Brassica carinata HOM05D009418 ORTHO05D094631 4.8e-16 89.4 286 29.7
C07p13430 Brassica napus HOM05D008838 ORTHO05D027188 1.4e-15 87.8 265 30.9
BolC7t41838H Brassica oleracea HOM05D008838 ORTHO05D027188 1.4e-15 87.8 265 30.9
BraA05t19813Z Brassica rapa HOM05D008838 ORTHO05D027188 4.5e-14 82.8 90 54.4
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 7.7e-14 82.0 309 28.8
BcaB05g22096 Brassica carinata HOM05D009418 ORTHO05D011792 1.7e-13 80.9 268 27.6
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 6.5e-13 79.0 249 31.7
BcaB05g23099 Brassica carinata HOM05D008838 ORTHO05D017574 8.5e-13 78.6 135 40.0
BcaC08g46851 Brassica carinata HOM05D009418 ORTHO05D090315 8.5e-13 78.6 287 29.3
BcaB05g23461 Brassica carinata HOM05D009418 ORTHO05D011792 3.2e-12 76.6 214 31.8
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 3.2e-12 76.6 54 70.4
C06p00920 Brassica napus HOM05D008838 ORTHO05D024146 7.2e-12 75.5 62 62.9
BraSC37t46125Z Brassica rapa HOM05D009418 ORTHO05D018626 9.4e-12 75.1 157 34.4
A10p08780 Brassica napus HOM05D009418 ORTHO05D018626 2.7e-11 73.6 157 33.8
BolC4t27364H Brassica oleracea HOM05D009418 ORTHO05D017574 3.6e-11 73.2 136 36.8
BolC6t35227H Brassica oleracea HOM05D016807 ORTHO05D024146 4.7e-11 72.8 51 68.6
BcaC01g03623 Brassica carinata HOM05D009418 ORTHO05D018626 6.1e-11 72.4 125 36.0
BolC4t27750H Brassica oleracea HOM05D009418 ORTHO05D018626 8.0e-11 72.0 157 33.1
BcaC02g07853 Brassica carinata HOM05D009418 ORTHO05D002311 1.4e-10 71.2 157 31.8
BcaB01g01600 Brassica carinata HOM05D009418 ORTHO05D092871 2.3e-10 70.5 289 28.4
A06p26780 Brassica napus HOM05D008838 ORTHO05D100584 7.5e-09 65.5 50 62.0
C08p22740 Brassica napus HOM05D009418 ORTHO05D018626 7.5e-09 65.5 118 35.6
BolC8t49910H Brassica oleracea HOM05D009418 ORTHO05D018626 7.5e-09 65.5 118 35.6
BcaC08g47159 Brassica carinata HOM05D009418 ORTHO05D090899 2.8e-08 63.5 205 30.2
BolC9t55841H Brassica oleracea HOM05D008838 ORTHO05D021876 1.4e-07 61.2 218 28.9
BcaC05g24337 Brassica carinata HOM05D009418 ORTHO05D011792 5.3e-07 59.3 132 31.1
BcaB07g33121 Brassica carinata HOM05D009418 ORTHO05D027366 7.0e-07 58.9 51 54.9


User provided reference genes

Program Settings