Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33514H Brassica oleracea HOM05D010965 ORTHO05D016023 5.3e-167 590.9 286 100.0
BcaB02g08391 Brassica carinata HOM05D000018 ORTHO05D016023 2.0e-73 280.0 288 53.8
BraA04t16224Z Brassica rapa HOM05D010965 ORTHO05D016023 1.1e-68 264.2 288 51.0
A04p05130 Brassica napus HOM05D010965 ORTHO05D016023 1.5e-68 263.8 288 51.0
BcaB02g08393 Brassica carinata HOM05D010965 ORTHO05D016023 4.3e-68 262.3 280 52.1
BolC4t25347H Brassica oleracea HOM05D010965 ORTHO05D016023 7.4e-68 261.5 289 51.2
BcaC02g09041 Brassica carinata HOM05D010965 ORTHO05D016023 4.5e-65 252.3 261 54.0
BcaB02g08395 Brassica carinata HOM05D010965 ORTHO05D016023 1.9e-63 246.9 287 50.2
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 2.8e-59 233.0 235 52.8
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 9.0e-58 228.0 235 51.5
C04p37700 Brassica napus HOM05D010965 ORTHO05D016023 2.9e-56 223.0 290 45.9
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 1.9e-55 220.3 229 51.1
C04p36520 Brassica napus HOM05D010965 ORTHO05D024278 8.5e-48 194.9 211 50.2
BolC4t25144H Brassica oleracea HOM05D010965 ORTHO05D024278 8.5e-48 194.9 211 50.2
BcaC02g09040 Brassica carinata HOM05D010965 ORTHO05D016023 2.2e-27 127.1 250 32.8
Thhalv10003587m.g Eutrema salsugineum HOM05D001456 ORTHO05D002799 4.5e-17 92.8 257 27.6
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 2.2e-11 73.9 210 27.6
Carub.0006s2385 Capsella rubella HOM05D001456 ORTHO05D019698 2.4e-10 70.5 155 27.1
AL5G20610 Arabidopsis lyrata HOM05D001456 ORTHO05D019698 4.5e-09 66.2 162 24.7
AL5G20620 Arabidopsis lyrata HOM05D001456 ORTHO05D019698 7.8e-09 65.5 157 24.8
AL1G52920 Arabidopsis lyrata HOM05D001456 ORTHO05D012451 1.0e-08 65.1 129 35.7
BolC5t33513H Brassica oleracea HOM05D010965 ORTHO05D016023 1.3e-08 64.7 224 27.7
Os07g0637200 Oryza sativa ssp. japonica HOM05D001456 ORTHO05D002799 2.9e-08 63.5 157 28.7
Aa31LG11G2160 Aethionema arabicum HOM05D001456 ORTHO05D002799 3.8e-08 63.2 156 28.8
Medtr3g050240 Medicago truncatula HOM05D001456 ORTHO05D002799 3.8e-08 63.2 261 22.2
Sp5g01180 Schrenkiella parvula HOM05D001456 ORTHO05D002799 3.8e-08 63.2 155 27.1
Glyma.03G228500 Glycine max HOM05D001456 ORTHO05D002799 5.0e-08 62.8 157 28.7
Thhalv10005803m.g Eutrema salsugineum HOM05D001456 ORTHO05D002799 6.6e-08 62.4 155 27.1
BcaC07g40712 Brassica carinata HOM05D001456 ORTHO05D002799 8.6e-08 62.0 155 27.1
A09p54270 Brassica napus HOM05D001456 ORTHO05D002799 8.6e-08 62.0 155 27.1
C08p37150 Brassica napus HOM05D001456 ORTHO05D002799 8.6e-08 62.0 155 27.1
BolC8t51292H Brassica oleracea HOM05D001456 ORTHO05D002799 8.6e-08 62.0 155 27.1
BraA09t40839Z Brassica rapa HOM05D001456 ORTHO05D002799 8.6e-08 62.0 155 27.1
Sabra13G0002700 Salix brachista HOM05D001456 ORTHO05D002799 8.6e-08 62.0 155 26.5
Aqoxy2G02522 Aquilegia oxysepala HOM05D001456 ORTHO05D002799 3.3e-07 60.1 162 28.4
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 4.3e-07 59.7 261 25.7
Sopen02g033560 Solanum pennellii HOM05D001456 ORTHO05D002799 4.3e-07 59.7 157 25.5
BcaC02g08726 Brassica carinata HOM05D001456 ORTHO05D031976 5.6e-07 59.3 104 32.7
C04p51270 Brassica napus HOM05D001456 ORTHO05D031976 5.6e-07 59.3 104 32.7
BolC4t26717H Brassica oleracea HOM05D001456 ORTHO05D031976 5.6e-07 59.3 104 32.7
CSS0023005 Camellia sinensis var. sinensis HOM05D001456 ORTHO05D002799 1.2e-06 58.2 96 30.2
CARHR172550 Cardamine hirsuta HOM05D001456 ORTHO05D002799 2.1e-06 57.4 78 34.6
Thhalv10027969m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 2.1e-06 57.4 108 29.6
BraA02t09090Z Brassica rapa HOM05D001456 ORTHO05D014991 4.7e-06 56.2 148 28.4
BcaB04g19904 Brassica carinata HOM05D001456 ORTHO05D002799 6.1e-06 55.8 82 32.9
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 6.1e-06 55.8 135 25.9
HanXRQChr09g0270991 Helianthus annuus HOM05D001456 ORTHO05D002799 6.1e-06 55.8 101 30.7
AL5G39230 Arabidopsis lyrata HOM05D001456 ORTHO05D012451 8.0e-06 55.5 106 32.1
AT3G62210 Arabidopsis thaliana HOM05D001456 ORTHO05D002799 8.0e-06 55.5 77 36.4


User provided reference genes

Program Settings