Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33499H Brassica oleracea HOM05D022203 ORTHO05D024331 5.3e-75 284.3 142 100.0
C05p47850 Brassica napus HOM05D022203 ORTHO05D024331 2.6e-66 255.4 143 92.3
BraA05t21990Z Brassica rapa HOM05D022203 ORTHO05D024331 2.9e-57 225.3 143 86.0
A05p31550 Brassica napus HOM05D022203 ORTHO05D024331 4.2e-40 168.3 107 85.0
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 3.7e-28 128.6 132 56.8
A06p04270 Brassica napus HOM05D000113 ORTHO05D001108 8.0e-07 57.8 113 31.9
BraA06t23630Z Brassica rapa HOM05D000113 ORTHO05D001108 8.0e-07 57.8 113 31.9
Carub.0001s3780 Capsella rubella HOM05D000113 ORTHO05D001108 1.0e-06 57.4 102 32.4
AT1G48650 Arabidopsis thaliana HOM05D000113 ORTHO05D001108 1.4e-06 57.0 102 31.4
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 1.8e-06 56.6 31 90.3
CARHR038300 Cardamine hirsuta HOM05D000113 ORTHO05D001108 2.3e-06 56.2 102 31.4
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 3.0e-06 55.8 28 92.9
BcaC08g43074 Brassica carinata HOM05D000113 ORTHO05D001108 3.0e-06 55.8 116 33.6
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 3.0e-06 55.8 28 92.9
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 3.0e-06 55.8 28 92.9
C06p03320 Brassica napus HOM05D000113 ORTHO05D001108 3.0e-06 55.8 116 33.6
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 3.0e-06 55.8 28 92.9
BolC6t35468H Brassica oleracea HOM05D000113 ORTHO05D001108 3.0e-06 55.8 116 33.6
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 3.0e-06 55.8 28 92.9
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 3.0e-06 55.8 28 92.9
Thhalv10011191m.g Eutrema salsugineum HOM05D000113 ORTHO05D001108 3.0e-06 55.8 102 31.4
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 3.0e-06 55.8 28 92.9
BcaB07g33724 Brassica carinata HOM05D000113 ORTHO05D001108 4.0e-06 55.5 113 31.9
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 4.0e-06 55.5 28 89.3
Sp1g35630 Schrenkiella parvula HOM05D000113 ORTHO05D001108 6.8e-06 54.7 78 35.9
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 8.9e-06 54.3 28 89.3


User provided reference genes

Program Settings