Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33486H Brassica oleracea HOM05D000975 ORTHO05D003128 2.8e-45 184.9 91 100.0
BolC7t41154H Brassica oleracea HOM05D000975 ORTHO05D003128 2.8e-45 184.9 91 100.0
BolC3t21040H Brassica oleracea HOM05D000975 ORTHO05D003128 6.2e-45 183.7 91 98.9
BraA02t07583Z Brassica rapa HOM05D000975 ORTHO05D003128 1.1e-44 183.0 91 97.8
BraA03t14437Z Brassica rapa HOM05D000975 ORTHO05D003128 1.4e-44 182.6 91 97.8
BraA08t32984Z Brassica rapa HOM05D000975 ORTHO05D003128 1.4e-44 182.6 91 97.8
BraA09t39821Z Brassica rapa HOM05D000975 ORTHO05D003128 1.4e-44 182.6 91 97.8
A09p31730 Brassica napus HOM05D000975 ORTHO05D003128 1.8e-44 182.2 91 97.8
BcaC04g20351 Brassica carinata HOM05D000975 ORTHO05D003128 2.4e-44 181.8 91 97.8
C02p45180 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-44 181.8 91 97.8
C02p51080 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-44 181.8 91 97.8
C05p33140 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-44 181.8 91 97.8
C07p07360 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-44 181.8 91 97.8
C07p11510 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-44 181.8 91 97.8
C07p26100 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-44 181.8 91 97.8
C07p32040 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-44 181.8 91 97.8
C08p14260 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-44 181.8 91 97.8
A06p23380 Brassica napus HOM05D000975 ORTHO05D003128 3.1e-44 181.4 91 96.7
A07p05600 Brassica napus HOM05D000975 ORTHO05D003128 3.1e-44 181.4 91 96.7
BcaC02g09151 Brassica carinata HOM05D000975 ORTHO05D003128 4.0e-44 181.0 89 100.0
BcaC06g34162 Brassica carinata HOM05D000975 ORTHO05D003128 4.0e-44 181.0 89 100.0
BcaC03g14229 Brassica carinata HOM05D000975 ORTHO05D003128 5.3e-44 180.6 91 96.7
BcaNung04170 Brassica carinata HOM05D000975 ORTHO05D003128 1.2e-43 179.5 91 96.7
A03p63360 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-43 179.5 91 95.6
A05p09940 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-43 179.5 91 95.6
A05p27730 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-43 179.5 91 95.6
A06p21910 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-43 179.5 91 95.6
A09p29830 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-43 179.5 91 95.6
A09p29880 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-43 179.5 91 95.6
A06p33000 Brassica napus HOM05D000975 ORTHO05D003128 2.6e-43 178.3 91 94.5
A09p24160 Brassica napus HOM05D000975 ORTHO05D003128 2.6e-43 178.3 91 94.5
BraA05t21656Z Brassica rapa HOM05D000975 ORTHO05D003128 2.6e-43 178.3 91 94.5
A01p33210 Brassica napus HOM05D000975 ORTHO05D003128 3.4e-43 177.9 91 94.5
A01p28020 Brassica napus HOM05D000975 ORTHO05D003128 4.5e-43 177.6 91 94.5
A07p02240 Brassica napus HOM05D000975 ORTHO05D003128 4.5e-43 177.6 89 96.6
C02p32280 Brassica napus HOM05D000975 ORTHO05D003128 4.5e-43 177.6 89 97.8
BraA03t14845Z Brassica rapa HOM05D000975 ORTHO05D003128 4.5e-43 177.6 91 95.6
BraA04t16292Z Brassica rapa HOM05D000975 ORTHO05D003128 4.5e-43 177.6 89 96.6
A07p22630 Brassica napus HOM05D000975 ORTHO05D003128 5.8e-43 177.2 89 95.5
A03p68240 Brassica napus HOM05D000975 ORTHO05D003128 7.6e-43 176.8 91 93.4
BolC9t54214H Brassica oleracea HOM05D000975 ORTHO05D003128 1.3e-42 176.0 91 94.5
A07p03480 Brassica napus HOM05D000975 ORTHO05D003128 1.7e-42 175.6 91 93.4
A01p15390 Brassica napus HOM05D000975 ORTHO05D003128 2.9e-42 174.9 89 95.5
A05p31270 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-41 172.9 91 92.3
BcaC03g15685 Brassica carinata HOM05D000975 ORTHO05D003128 2.7e-40 168.3 86 95.3
BolC2t09407H Brassica oleracea HOM05D000975 ORTHO05D003128 2.7e-40 168.3 86 95.3
BcaC04g22997 Brassica carinata HOM05D000975 ORTHO05D003128 6.2e-37 157.1 91 87.9
BcaB02g11058 Brassica carinata HOM05D000975 ORTHO05D003128 1.8e-23 112.5 88 54.5
BcaB08g35626 Brassica carinata HOM05D000975 ORTHO05D003128 3.3e-22 108.2 88 54.5
BcaB05g24454 Brassica carinata HOM05D000975 ORTHO05D003128 4.3e-22 107.8 88 53.4
BcaB01g01398 Brassica carinata HOM05D000975 ORTHO05D003128 1.3e-21 106.3 88 53.4
BcaB03g16068 Brassica carinata HOM05D000975 ORTHO05D003128 1.3e-21 106.3 84 59.5
BcaB04g18232 Brassica carinata HOM05D000975 ORTHO05D003128 1.3e-21 106.3 88 52.3
C07p32930 Brassica napus HOM05D000975 ORTHO05D003128 2.8e-21 105.1 88 53.4
A01p28010 Brassica napus HOM05D000975 ORTHO05D003128 4.8e-21 104.4 88 54.5
A05p27750 Brassica napus HOM05D000975 ORTHO05D003128 4.8e-21 104.4 88 54.5
C02p34180 Brassica napus HOM05D000975 ORTHO05D003128 4.8e-21 104.4 88 51.1
BolC9t57335H Brassica oleracea HOM05D000975 ORTHO05D003128 4.8e-21 104.4 52 96.2
A01p33190 Brassica napus HOM05D000975 ORTHO05D003128 6.3e-21 104.0 88 54.5
A05p09910 Brassica napus HOM05D000975 ORTHO05D003128 6.3e-21 104.0 88 54.5
A06p20310 Brassica napus HOM05D000975 ORTHO05D003128 6.3e-21 104.0 88 54.5
A08p14810 Brassica napus HOM05D000975 ORTHO05D003128 6.3e-21 104.0 88 54.5
A09p24390 Brassica napus HOM05D000975 ORTHO05D003128 6.3e-21 104.0 88 54.5
BraA06t23869Z Brassica rapa HOM05D000975 ORTHO05D003128 6.3e-21 104.0 88 54.5
BolC3t15621H Brassica oleracea HOM05D000975 ORTHO05D003128 8.2e-21 103.6 88 53.4
BcaC02g11383 Brassica carinata HOM05D000975 ORTHO05D003128 1.1e-20 103.2 88 50.0
A02p27500 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-20 103.2 88 53.4
A09p29810 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-20 103.2 88 54.5
A10p04910 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-20 103.2 86 55.8
BraA02t07778Z Brassica rapa HOM05D000975 ORTHO05D003128 1.1e-20 103.2 88 53.4
BcaC02g09150 Brassica carinata HOM05D000975 ORTHO05D003128 1.4e-20 102.8 88 53.4
C02p09970 Brassica napus HOM05D000975 ORTHO05D003128 1.4e-20 102.8 88 53.4
C03p75390 Brassica napus HOM05D000975 ORTHO05D003128 1.4e-20 102.8 88 53.4
C04p40840 Brassica napus HOM05D000975 ORTHO05D003128 1.4e-20 102.8 88 50.0
C08p14240 Brassica napus HOM05D000975 ORTHO05D003128 1.4e-20 102.8 88 53.4
BolC4t25667H Brassica oleracea HOM05D000975 ORTHO05D003128 1.4e-20 102.8 88 50.0
BolC5t32447H Brassica oleracea HOM05D000975 ORTHO05D003128 1.4e-20 102.8 88 53.4
BolC9t55547H Brassica oleracea HOM05D000975 ORTHO05D003128 1.4e-20 102.8 52 96.2
BcaC03g14228 Brassica carinata HOM05D000975 ORTHO05D003128 1.8e-20 102.4 88 53.4
A07p03460 Brassica napus HOM05D000975 ORTHO05D003128 1.8e-20 102.4 88 53.4
C04p15970 Brassica napus HOM05D000975 ORTHO05D003128 1.8e-20 102.4 88 50.0
BolC4t23170H Brassica oleracea HOM05D000975 ORTHO05D003128 1.8e-20 102.4 88 50.0
BcaB01g00464 Brassica carinata HOM05D000975 ORTHO05D003128 2.4e-20 102.1 88 50.0
BcaC09g49098 Brassica carinata HOM05D000975 ORTHO05D003128 2.4e-20 102.1 88 50.0
A01p14510 Brassica napus HOM05D000975 ORTHO05D003128 2.4e-20 102.1 86 54.7
BolC1t04213H Brassica oleracea HOM05D000975 ORTHO05D003128 2.4e-20 102.1 88 50.0
BolC2t09402H Brassica oleracea HOM05D000975 ORTHO05D003128 2.4e-20 102.1 88 50.0
BolC6t37338H Brassica oleracea HOM05D000975 ORTHO05D003128 2.4e-20 102.1 88 50.0
BcaB05g21809 Brassica carinata HOM05D000975 ORTHO05D003128 3.1e-20 101.7 88 51.1
BcaC04g23000 Brassica carinata HOM05D000975 ORTHO05D003128 4.1e-20 101.3 88 52.3
A03p63740 Brassica napus HOM05D000975 ORTHO05D003128 4.1e-20 101.3 88 53.4
C04p28020 Brassica napus HOM05D000975 ORTHO05D003128 4.1e-20 101.3 88 50.0
C05p35160 Brassica napus HOM05D000975 ORTHO05D003128 4.1e-20 101.3 88 50.0
C09p13190 Brassica napus HOM05D000975 ORTHO05D003128 4.1e-20 101.3 88 52.3
BcaC02g10515 Brassica carinata HOM05D000975 ORTHO05D003128 6.9e-20 100.5 86 51.2
BcaC05g27533 Brassica carinata HOM05D000975 ORTHO05D003128 6.9e-20 100.5 88 50.0
A09p31720 Brassica napus HOM05D000975 ORTHO05D000395 9.0e-20 100.1 88 52.3
C07p25800 Brassica napus HOM05D000975 ORTHO05D003128 9.0e-20 100.1 86 50.0
C07p26070 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-19 99.8 88 52.3
BcaC03g15683 Brassica carinata HOM05D000975 ORTHO05D003128 1.5e-19 99.4 88 52.3
BcaC09g50298 Brassica carinata HOM05D000975 ORTHO05D003128 1.5e-19 99.4 90 48.9
A06p27630 Brassica napus HOM05D000975 ORTHO05D003128 1.5e-19 99.4 88 52.3
BcaC04g20350 Brassica carinata HOM05D000975 ORTHO05D003128 2.0e-19 99.0 88 52.3
BraA09t38017Z Brassica rapa HOM05D000975 ORTHO05D003128 2.0e-19 99.0 79 55.7
BcaC06g34842 Brassica carinata HOM05D000975 ORTHO05D003128 2.6e-19 98.6 86 51.2
A05p31240 Brassica napus HOM05D000975 ORTHO05D003128 2.6e-19 98.6 85 52.9
C04p57190 Brassica napus HOM05D000975 ORTHO05D003128 2.6e-19 98.6 88 50.0
BcaC06g36141 Brassica carinata HOM05D000975 ORTHO05D003128 3.4e-19 98.2 88 51.1
BolC7t41597H Brassica oleracea HOM05D000975 ORTHO05D003128 3.4e-19 98.2 88 48.9
BcaC02g08706 Brassica carinata HOM05D000975 ORTHO05D003128 4.5e-19 97.8 88 50.0
BolC2t08412H Brassica oleracea HOM05D000975 ORTHO05D000395 4.5e-19 97.8 88 50.0
BolC5t33483H Brassica oleracea HOM05D000975 ORTHO05D003128 4.5e-19 97.8 79 54.4
BcaC03g14808 Brassica carinata HOM05D000975 ORTHO05D003128 5.9e-19 97.4 88 48.9
C03p87740 Brassica napus HOM05D000975 ORTHO05D003128 5.9e-19 97.4 88 50.0
C09p33360 Brassica napus HOM05D000975 ORTHO05D003128 5.9e-19 97.4 86 48.8
BolC9t56174H Brassica oleracea HOM05D000975 ORTHO05D003128 5.9e-19 97.4 86 48.8
BcaC02g09785 Brassica carinata HOM05D000975 ORTHO05D003128 7.6e-19 97.1 86 48.8
BcaC06g35755 Brassica carinata HOM05D000975 ORTHO05D003128 1.3e-18 96.3 86 48.8
BolC9t54213H Brassica oleracea HOM05D000975 ORTHO05D003128 1.3e-18 96.3 79 53.2
BcaC04g21307 Brassica carinata HOM05D000975 ORTHO05D003128 2.2e-18 95.5 86 47.7
BcaC06g34163 Brassica carinata HOM05D000975 ORTHO05D003128 2.2e-18 95.5 88 51.1
BolC5t32460H Brassica oleracea HOM05D000975 ORTHO05D003128 2.2e-18 95.5 88 46.6
C04p51480 Brassica napus HOM05D000975 ORTHO05D000421 3.8e-18 94.7 79 51.9
C04p36240 Brassica napus HOM05D000975 ORTHO05D003128 5.0e-18 94.4 88 46.6
BolC7t42808H Brassica oleracea HOM05D000975 ORTHO05D003128 5.0e-18 94.4 74 54.1
A09p40900 Brassica napus HOM05D000975 ORTHO05D003128 6.5e-18 94.0 80 55.0
BcaB08g35181 Brassica carinata HOM05D000975 ORTHO05D003128 1.1e-17 93.2 88 48.9
BolC7t41151H Brassica oleracea HOM05D000975 ORTHO05D003128 1.1e-17 93.2 79 51.9
BcaC02g09820 Brassica carinata HOM05D000975 ORTHO05D003128 1.9e-17 92.4 86 46.5
BcaC05g25477 Brassica carinata HOM05D000975 ORTHO05D003128 1.9e-17 92.4 88 46.6
BcaC07g37493 Brassica carinata HOM05D000975 ORTHO05D003128 1.9e-17 92.4 67 55.2
BolC3t21088H Brassica oleracea HOM05D000975 ORTHO05D003128 1.9e-17 92.4 79 50.6
BolC4t25161H Brassica oleracea HOM05D000975 ORTHO05D003128 1.9e-17 92.4 86 46.5
C02p28110 Brassica napus HOM05D000975 ORTHO05D003128 3.2e-17 91.7 88 45.5
BcaB02g11153 Brassica carinata HOM05D000975 ORTHO05D003128 4.2e-17 91.3 88 45.5
BcaB02g10294 Brassica carinata HOM05D000975 ORTHO05D003128 1.2e-16 89.7 88 45.5
BcaB03g16188 Brassica carinata HOM05D000975 ORTHO05D003128 1.6e-16 89.4 88 44.3
BcaNung06546 Brassica carinata HOM05D000975 ORTHO05D003128 1.0e-15 86.7 74 48.6
C05p33170 Brassica napus HOM05D000975 ORTHO05D003128 1.8e-15 85.9 84 48.8
BcaB04g17865 Brassica carinata HOM05D000975 ORTHO05D003128 8.8e-15 83.6 89 55.1
BraA05t21313Z Brassica rapa HOM05D000975 ORTHO05D003128 1.1e-14 83.2 81 45.7
BcaB03g16067 Brassica carinata HOM05D000975 ORTHO05D003128 4.3e-14 81.3 88 43.2
BcaC09g48472 Brassica carinata HOM05D000975 ORTHO05D003128 4.3e-14 81.3 88 46.6
BcaC03g15679 Brassica carinata HOM05D000975 ORTHO05D003128 9.7e-14 80.1 76 52.6
C04p20960 Brassica napus HOM05D000975 ORTHO05D003128 9.7e-14 80.1 59 57.6
BolC1t02630H Brassica oleracea HOM05D000975 ORTHO05D003128 1.7e-13 79.3 69 50.7
BcaC05g27726 Brassica carinata HOM05D000975 ORTHO05D003128 3.1e-12 75.1 71 45.1
BcaB08g35625 Brassica carinata HOM05D000975 ORTHO05D003128 2.6e-11 72.0 38 86.8
C09p43970 Brassica napus HOM05D000975 ORTHO05D003128 1.3e-10 69.7 54 55.6
BolC3t20046H Brassica oleracea HOM05D000975 ORTHO05D003128 5.0e-10 67.8 88 37.5
BraA05t21232Z Brassica rapa HOM05D000975 ORTHO05D003128 8.5e-10 67.0 56 50.0
BraA05t21654Z Brassica rapa HOM05D000975 ORTHO05D003128 9.4e-09 63.5 55 54.5
BcaB03g16257 Brassica carinata HOM05D000975 ORTHO05D003128 2.7e-08 62.0 53 47.2
BcaB07g33059 Brassica carinata HOM05D000975 ORTHO05D003128 3.6e-08 61.6 85 38.8
BraA09t38303Z Brassica rapa HOM05D000975 ORTHO05D003128 1.0e-07 60.1 51 54.9
C02p45150 Brassica napus HOM05D000975 ORTHO05D003128 2.3e-07 58.9 44 56.8
BraA08t33463Z Brassica rapa HOM05D000975 ORTHO05D003128 5.1e-07 57.8 40 72.5
BraA09t38546Z Brassica rapa HOM05D000975 ORTHO05D003128 6.7e-07 57.4 39 74.4
BcaC04g22080 Brassica carinata HOM05D000975 ORTHO05D003128 1.5e-06 56.2 48 52.1
C09p23710 Brassica napus HOM05D000975 ORTHO05D003128 1.5e-06 56.2 48 52.1
BolC9t55297H Brassica oleracea HOM05D000975 ORTHO05D000395 1.5e-06 56.2 48 52.1


User provided reference genes

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