Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33403H Brassica oleracea HOM05D000496 ORTHO05D043259 1.7e-120 436.0 218 100.0
BraA09t39436Z Brassica rapa HOM05D000496 ORTHO05D043259 3.5e-46 189.1 218 49.5
C09p43250 Brassica napus HOM05D000400 ORTHO05D000575 1.4e-26 124.0 131 55.0
Thhalv10009818m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.9e-23 113.6 188 41.5
A03p59190 Brassica napus HOM05D000496 ORTHO05D033613 3.9e-21 105.9 131 48.9
BolC7t43724H Brassica oleracea HOM05D000496 ORTHO05D011507 6.7e-21 105.1 182 40.1
BraA02t07553Z Brassica rapa HOM05D000496 ORTHO05D033613 2.2e-19 100.1 131 47.3
BolC6t37835H Brassica oleracea HOM05D000496 ORTHO05D033613 6.3e-19 98.6 127 48.0
BcaC06g35182 Brassica carinata HOM05D000496 ORTHO05D017591 3.8e-16 89.4 151 39.7
BcaB01g03263 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-16 88.2 84 52.4
BolC9t55919H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-15 87.4 203 29.6
BcaB05g21700 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-15 86.3 151 40.4
BolC4t28512H Brassica oleracea HOM05D000496 ORTHO05D011507 3.2e-15 86.3 176 34.1
BcaC09g49291 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-15 85.9 146 39.7
BcaB01g02832 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-15 85.1 93 47.3
BcaB04g17647 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-14 82.0 148 35.8
BolC5t32617H Brassica oleracea HOM05D000496 ORTHO05D011507 6.1e-14 82.0 216 33.3
BcaC01g00202 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-13 80.9 157 35.0
BcaC09g48325 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-13 80.9 153 35.3
BraA09t38053Z Brassica rapa HOM05D000496 ORTHO05D017591 1.4e-13 80.9 161 37.3
C04p24510 Brassica napus HOM05D000496 ORTHO05D017591 1.8e-13 80.5 96 44.8
BcaC05g27874 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-13 79.3 146 37.7
BraA06t25795Z Brassica rapa HOM05D000496 ORTHO05D017591 3.3e-12 76.3 154 35.7
BolC7t44756H Brassica oleracea HOM05D000496 ORTHO05D017591 4.4e-12 75.9 135 39.3
BraA04t15922Z Brassica rapa HOM05D000496 ORTHO05D011507 7.5e-12 75.1 125 37.6
BolC1t04497H Brassica oleracea HOM05D000496 ORTHO05D017591 9.7e-12 74.7 135 39.3
BcaB03g15483 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-11 74.3 78 47.4
A04p01970 Brassica napus HOM05D000496 ORTHO05D011507 1.3e-11 74.3 118 39.0
BcaC01g04220 Brassica carinata HOM05D000003 ORTHO05D000004 1.7e-11 73.9 129 39.5
BolC2t08900H Brassica oleracea HOM05D000496 ORTHO05D011507 1.7e-11 73.9 135 33.3
BolC6t35401H Brassica oleracea HOM05D000496 ORTHO05D017591 1.7e-11 73.9 69 50.7
BolC7t42402H Brassica oleracea HOM05D000496 ORTHO05D017591 2.2e-11 73.6 135 39.3
BcaC05g27475 Brassica carinata HOM05D000496 ORTHO05D011507 3.7e-11 72.8 82 43.9
BcaC08g44536 Brassica carinata HOM05D000496 ORTHO05D015464 4.8e-11 72.4 155 34.2
BraA05t21587Z Brassica rapa HOM05D029899 ORTHO05D033631 6.3e-11 72.0 155 35.5
BcaC08g43020 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-10 70.9 69 49.3
BraA10t43116Z Brassica rapa HOM05D000496 ORTHO05D011507 2.4e-10 70.1 135 32.6
BolC5t33680H Brassica oleracea HOM05D000496 ORTHO05D018667 7.0e-10 68.6 135 38.5
Thhalv10017646m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 7.0e-10 68.6 135 34.1
C08p24280 Brassica napus HOM05D000496 ORTHO05D021714 1.2e-09 67.8 72 52.8
BraA10t43253Z Brassica rapa HOM05D000496 ORTHO05D011507 2.0e-09 67.0 144 36.8
BcaC05g27187 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-09 66.2 162 33.3
BolC5t31818H Brassica oleracea HOM05D000496 ORTHO05D011507 3.5e-09 66.2 138 33.3
BolC3t16773H Brassica oleracea HOM05D000496 ORTHO05D011507 7.7e-09 65.1 143 34.3
BcaB08g35105 Brassica carinata HOM05D000496 ORTHO05D017591 1.7e-08 63.9 77 44.2
BolC2t08231H Brassica oleracea HOM05D000496 ORTHO05D011507 1.1e-07 61.2 128 35.9
BcaC04g21873 Brassica carinata HOM05D000496 ORTHO05D011507 2.5e-07 60.1 134 35.1
BolC3t19938H Brassica oleracea HOM05D000496 ORTHO05D011507 4.2e-07 59.3 137 32.8
BcaC06g36003 Brassica carinata HOM05D000496 ORTHO05D021714 5.5e-07 58.9 163 33.7
BolC4t24500H Brassica oleracea HOM05D000496 ORTHO05D105899 1.2e-06 57.8 75 40.0
BolC2t08402H Brassica oleracea HOM05D000496 ORTHO05D011507 2.1e-06 57.0 60 46.7
BolC4t21832H Brassica oleracea HOM05D000496 ORTHO05D011507 3.6e-06 56.2 72 43.1
BraA06t25181Z Brassica rapa HOM05D000496 ORTHO05D011507 4.7e-06 55.8 127 33.1
BcaB06g25900 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-06 55.5 133 33.8
C08p04090 Brassica napus HOM05D000496 ORTHO05D011507 6.1e-06 55.5 105 35.2
BcaB01g01907 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-06 55.1 51 54.9
BolC2t07599H Brassica oleracea HOM05D000496 ORTHO05D018667 8.0e-06 55.1 114 36.8


User provided reference genes

Program Settings