Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33337H Brassica oleracea HOM05D001086 ORTHO05D028348 1.8e-99 365.9 186 100.0
BolC8t48395H Brassica oleracea HOM05D001086 ORTHO05D001112 6.5e-73 277.7 204 75.5
BraA02t07480Z Brassica rapa HOM05D001086 ORTHO05D001112 9.7e-69 263.8 256 61.3
BolC8t49895H Brassica oleracea HOM05D001086 ORTHO05D001112 4.5e-58 228.4 247 55.9
BolC5t30470H Brassica oleracea HOM05D001086 ORTHO05D001112 1.8e-54 216.5 149 79.9
BolC7t41968H Brassica oleracea HOM05D001086 ORTHO05D001112 2.2e-44 183.0 164 65.2
BolC3t20155H Brassica oleracea HOM05D001086 ORTHO05D001112 3.7e-44 182.2 190 56.3
BolC9t57565H Brassica oleracea HOM05D001086 ORTHO05D001112 3.2e-40 169.1 92 90.2
BolC2t10560H Brassica oleracea HOM05D001086 ORTHO05D001112 8.0e-39 164.5 97 86.6
BolC9t55285H Brassica oleracea HOM05D001086 ORTHO05D001112 4.0e-38 162.2 227 49.3
BolC4t22505H Brassica oleracea HOM05D001086 ORTHO05D001112 9.7e-37 157.5 177 57.1
BolC2t11868H Brassica oleracea HOM05D001086 ORTHO05D001112 1.3e-36 157.1 172 57.0
BcaC08g44335 Brassica carinata HOM05D001086 ORTHO05D001112 8.3e-36 154.5 108 78.7
BolC7t44294H Brassica oleracea HOM05D001086 ORTHO05D001112 1.1e-35 154.1 108 78.7
BolC2t11315H Brassica oleracea HOM05D001086 ORTHO05D001112 5.3e-35 151.8 181 54.7
BolC8t48731H Brassica oleracea HOM05D001086 ORTHO05D001112 3.5e-34 149.1 146 60.3
BolC2t09272H Brassica oleracea HOM05D001086 ORTHO05D028348 1.7e-28 130.2 86 73.3
BolC4t24925H Brassica oleracea HOM05D001086 ORTHO05D001112 1.7e-28 130.2 78 87.2
BolC9t56315H Brassica oleracea HOM05D000249 ORTHO05D040655 7.0e-27 124.8 69 89.9
BolC1t01667H Brassica oleracea HOM05D001086 ORTHO05D001112 3.8e-25 119.0 115 61.7
BolC4t25871H Brassica oleracea HOM05D001086 ORTHO05D001112 3.3e-24 115.9 91 69.2
BolC7t41119H Brassica oleracea HOM05D001086 ORTHO05D001112 1.2e-23 114.0 112 61.6
BolC5t31865H Brassica oleracea HOM05D001086 ORTHO05D001112 8.0e-23 111.3 115 61.7
BcaC01g03184 Brassica carinata HOM05D001086 ORTHO05D001112 1.4e-22 110.5 92 70.7
BolC6t35719H Brassica oleracea HOM05D000171 ORTHO05D000101 1.2e-21 107.5 88 64.8
C09p34680 Brassica napus HOM05D000249 ORTHO05D040655 2.6e-21 106.3 93 63.4
BolC1t03924H Brassica oleracea HOM05D001086 ORTHO05D028348 3.4e-21 105.9 94 63.8
BolC5t33130H Brassica oleracea HOM05D001086 ORTHO05D001112 1.7e-20 103.6 91 63.7
BcaC02g08424 Brassica carinata HOM05D001086 ORTHO05D001112 2.2e-20 103.2 108 56.5
BolC4t27458H Brassica oleracea HOM05D001086 ORTHO05D001112 4.1e-19 99.0 121 52.9
BolC6t39984H Brassica oleracea HOM05D001086 ORTHO05D001112 9.2e-19 97.8 167 43.7
BcaC01g01364 Brassica carinata HOM05D001086 ORTHO05D001112 6.6e-17 91.7 48 91.7
BolC9t58218H Brassica oleracea HOM05D001086 ORTHO05D009904 1.6e-15 87.0 76 68.4
BolC1t04055H Brassica oleracea HOM05D001086 ORTHO05D001112 2.8e-15 86.3 125 49.6
BraA05t21258Z Brassica rapa HOM05D001086 ORTHO05D028348 1.0e-14 84.3 93 50.5
BolC1t03658H Brassica oleracea HOM05D001086 ORTHO05D009904 1.4e-14 84.0 114 49.1
BolC1t02455H Brassica oleracea HOM05D001086 ORTHO05D001112 1.5e-13 80.5 161 41.6
BolC3t17316H Brassica oleracea HOM05D001086 ORTHO05D001112 1.5e-13 80.5 71 69.0
BcaB06g26226 Brassica carinata HOM05D001086 ORTHO05D001112 2.0e-13 80.1 48 79.2
BolC1t02354H Brassica oleracea HOM05D001086 ORTHO05D001112 3.4e-13 79.3 53 73.6
BolC9t57792H Brassica oleracea HOM05D001086 ORTHO05D001112 1.3e-12 77.4 113 46.9
BolC6t39063H Brassica oleracea HOM05D001086 ORTHO05D104803 4.9e-12 75.5 51 70.6
BolC9t55536H Brassica oleracea HOM05D001086 ORTHO05D001112 8.3e-12 74.7 51 74.5
BolC9t54535H Brassica oleracea HOM05D001086 ORTHO05D001112 1.4e-11 73.9 113 45.1
BraA06t26748Z Brassica rapa HOM05D001086 ORTHO05D001112 1.4e-11 73.9 114 43.0
BcaC08g44135 Brassica carinata HOM05D001086 ORTHO05D001112 1.9e-11 73.6 79 55.7
BolC1t03607H Brassica oleracea HOM05D001086 ORTHO05D001112 7.0e-11 71.6 113 45.1
Aa31sc15G140 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.6e-10 70.5 93 46.2
Aa31sc911G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.6e-10 70.5 110 43.6
BolC2t12203H Brassica oleracea HOM05D001086 ORTHO05D016795 2.0e-10 70.1 81 51.9
BolC1t03772H Brassica oleracea HOM05D001086 ORTHO05D001112 2.7e-10 69.7 98 41.8
Aa31LG7G10430 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.6e-10 68.9 121 42.1
Aa31sc86G70 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.6e-10 68.9 121 42.1
Aa31LG2G17960 Aethionema arabicum HOM05D001086 ORTHO05D001112 6.0e-10 68.6 114 42.1
Aa31sc360G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 6.0e-10 68.6 101 45.5
Aa31LG1G7490 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.0e-09 67.8 121 42.1
Aa31sc126G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.0e-09 67.8 93 45.2
Aa31sc177G60 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.3e-09 67.4 107 41.1
BolC7t43497H Brassica oleracea HOM05D001086 ORTHO05D001112 1.7e-09 67.0 83 47.0
Aa31sc32G80 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.3e-09 66.6 106 42.5
Aa31LG2G18230 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.9e-09 65.9 107 43.0
Aa31LG4G11620 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.9e-09 65.9 121 39.7
Aa31sc682G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.9e-09 65.9 117 41.9
Aa31sc452G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.0e-09 65.5 110 42.7
Aa31sc57G90 Aethionema arabicum HOM05D001086 ORTHO05D001112 6.6e-09 65.1 103 43.7
BolC1t03804H Brassica oleracea HOM05D001086 ORTHO05D001112 6.6e-09 65.1 66 60.6
Aa31sc47G60 Aethionema arabicum HOM05D001086 ORTHO05D001112 8.6e-09 64.7 103 43.7
Aa31sc2604G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.1e-08 64.3 121 38.0
Aa31LG4G12630 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.5e-08 63.9 103 42.7
Aa31LG7G10340 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.5e-08 63.9 106 41.5
BolC3t17056H Brassica oleracea HOM05D001086 ORTHO05D001112 1.5e-08 63.9 73 57.5
Aa31LG5G24150 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.9e-08 63.5 103 42.7
Aa31LG1G7000 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.5e-08 63.2 103 42.7
Aa31LG1G8020 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.5e-08 63.2 106 42.5
Aa31LG2G16380 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.5e-08 63.2 103 44.7
Aa31sc584G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.5e-08 63.2 121 40.5
BolC4t27499H Brassica oleracea HOM05D001086 ORTHO05D001112 2.5e-08 63.2 60 65.0
Aa31sc78G90 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.3e-08 62.8 87 48.3
Aa31LG8G11630 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.3e-08 62.4 121 38.0
Aa31LG6G12220 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.6e-08 62.0 85 49.4
Aa31LG7G1560 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.6e-08 62.0 109 39.4
Aa31sc155G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.6e-08 62.0 114 39.5
Aa31sc222G30 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.6e-08 62.0 104 41.3
Aa31sc626G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.6e-08 62.0 103 42.7
Aa31LG8G11550 Aethionema arabicum HOM05D001086 ORTHO05D001112 7.3e-08 61.6 106 39.6
Aa31LG9G5730 Aethionema arabicum HOM05D001086 ORTHO05D001112 7.3e-08 61.6 79 50.6
Aa31sc2745G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 7.3e-08 61.6 122 37.7
Aa31LG4G12390 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.5e-08 61.2 121 41.3
Aa31LG6G11410 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.5e-08 61.2 106 40.6
Aa31sc40G70 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.5e-08 61.2 121 37.2
Aa31sc490G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 9.5e-08 61.2 110 40.9
Aa31LG1G5730 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.2e-07 60.8 96 43.8
Aa31LG8G10170 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.2e-07 60.8 121 38.0
Aa31LG8G10870 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.2e-07 60.8 103 43.7
Aa31sc56G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.2e-07 60.8 113 39.8
Aa31LG10G10170 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.6e-07 60.5 121 36.4
Aa31LG10G9830 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.6e-07 60.5 107 42.1
Aa31LG1G8140 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.6e-07 60.5 101 42.6
Aa31LG9G5880 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.6e-07 60.5 103 40.8
Aa31sc20G110 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.6e-07 60.5 106 39.6
Aa31sc218G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.6e-07 60.5 99 44.4
BcaB07g34051 Brassica carinata HOM05D001086 ORTHO05D092389 1.6e-07 60.5 37 75.7
Aa31LG8G11490 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.1e-07 60.1 74 47.3
Aa31sc295G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.1e-07 60.1 103 42.7
Aa31sc803G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.1e-07 60.1 103 42.7
Aa31LG8G12100 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.6e-07 59.3 103 41.7
Aa31sc147G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.6e-07 59.3 117 38.5
Aa31sc157G30 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.6e-07 59.3 103 41.7
Aa31sc279G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.6e-07 59.3 106 40.6
A09p16730 Brassica napus HOM05D001086 ORTHO05D001112 3.6e-07 59.3 80 46.2
Aa31LG3G5770 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.7e-07 58.9 117 39.3
Aa31LG6G10040 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.7e-07 58.9 103 41.7
Aa31sc255G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.7e-07 58.9 121 37.2
Aa31sc73G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.7e-07 58.9 74 48.6
Aa31LG4G14000 Aethionema arabicum HOM05D001086 ORTHO05D001112 6.2e-07 58.5 106 37.7
Aa31sc350G60 Aethionema arabicum HOM05D001086 ORTHO05D001112 6.2e-07 58.5 102 41.2
BcaC07g39483 Brassica carinata HOM05D001086 ORTHO05D001112 8.0e-07 58.2 57 63.2
Aa31sc46G70 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.1e-06 57.8 90 43.3
Aa31LG5G24180 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.4e-06 57.4 109 41.3
Aa31sc211G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.4e-06 57.4 107 40.2
BcaC04g22263 Brassica carinata HOM05D001086 ORTHO05D001112 1.4e-06 57.4 56 62.5
BolC1t03211H Brassica oleracea HOM05D001086 ORTHO05D001112 1.4e-06 57.4 115 39.1
Aa31LG2G17050 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.8e-06 57.0 117 38.5
Aa31LG9G6100 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.8e-06 57.0 98 40.8
Aa31sc103G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.8e-06 57.0 67 52.2
BcaC05g25944 Brassica carinata HOM05D006890 ORTHO05D009907 1.8e-06 57.0 84 51.2
Aa31LG11G7580 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.3e-06 56.6 63 49.2
Aa31sc1568G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.3e-06 56.6 117 38.5
Aa31sc1809G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.3e-06 56.6 97 42.3
Aa31sc189G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.3e-06 56.6 103 39.8
Aa31sc272G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.3e-06 56.6 106 37.7
Aa31sc347G30 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.3e-06 56.6 86 44.2
Aa31sc529G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.3e-06 56.6 110 39.1
Aa31LG10G9500 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.1e-06 56.2 103 40.8
Aa31LG3G6940 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.1e-06 56.2 103 40.8
Aa31LG6G10220 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.1e-06 56.2 77 49.4
Aa31sc1072G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.1e-06 56.2 103 39.8
Aa31LG8G12290 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.0e-06 55.8 117 37.6
Aa31sc18G60 Aethionema arabicum HOM05D001086 ORTHO05D001112 4.0e-06 55.8 104 39.4
Aa31LG7G12030 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.2e-06 55.5 107 40.2
Aa31sc2332G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 5.2e-06 55.5 103 40.8
BolC3t19326H Brassica oleracea HOM05D001086 ORTHO05D001112 5.2e-06 55.5 96 39.6
Aa31LG7G11700 Aethionema arabicum HOM05D001086 ORTHO05D001112 6.8e-06 55.1 105 38.1
Aa31sc147G50 Aethionema arabicum HOM05D001086 ORTHO05D001112 6.8e-06 55.1 99 39.4
Aa31sc246G40 Aethionema arabicum HOM05D001086 ORTHO05D001112 6.8e-06 55.1 97 40.2
Aa31sc276G80 Aethionema arabicum HOM05D001086 ORTHO05D001112 8.9e-06 54.7 99 40.4
Aa31sc495G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 8.9e-06 54.7 114 36.8
Aa31sc91G50 Aethionema arabicum HOM05D001086 ORTHO05D001112 8.9e-06 54.7 88 43.2
BolC6t36960H Brassica oleracea HOM05D001086 ORTHO05D001112 8.9e-06 54.7 62 53.2


User provided reference genes

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