Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33321H Brassica oleracea HOM05D015408 ORTHO05D013236 1.7e-26 122.1 68 100.0
BolC3t20860H Brassica oleracea HOM05D000214 ORTHO05D000131 5.5e-22 107.1 65 92.3
BolC3t19562H Brassica oleracea HOM05D000589 ORTHO05D001885 3.4e-19 97.8 66 80.3
BolC7t43887H Brassica oleracea HOM05D000589 ORTHO05D000401 4.4e-19 97.4 66 80.3
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 9.7e-19 96.3 66 78.8
BcaB06g25928 Brassica carinata HOM05D000589 ORTHO05D013236 4.8e-18 94.0 66 75.8
BcaC07g38294 Brassica carinata HOM05D000589 ORTHO05D013236 1.1e-17 92.8 66 74.2
BolC9t57367H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-17 92.4 66 74.2
BcaB01g03889 Brassica carinata HOM05D000589 ORTHO05D013236 1.2e-16 89.4 66 72.7
BolC3t14691H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-16 89.4 66 72.7
BolC1t02283H Brassica oleracea HOM05D000589 ORTHO05D000401 1.3e-15 85.9 66 66.7
BcaC05g24983 Brassica carinata HOM05D000589 ORTHO05D000401 2.9e-15 84.7 66 66.7
BolC8t47904H Brassica oleracea HOM05D000589 ORTHO05D000401 3.8e-15 84.3 66 66.7
C03p90850 Brassica napus HOM05D000589 ORTHO05D000401 5.0e-15 84.0 66 68.2
BolC5t30704H Brassica oleracea HOM05D000589 ORTHO05D000401 5.0e-15 84.0 65 69.2
BolC8t49443H Brassica oleracea HOM05D000589 ORTHO05D000401 5.0e-15 84.0 66 65.2
BolC3t21403H Brassica oleracea HOM05D000589 ORTHO05D000401 6.5e-15 83.6 66 66.7
BolC1t00773H Brassica oleracea HOM05D000589 ORTHO05D001885 2.5e-14 81.6 66 71.2
BcaB01g02135 Brassica carinata HOM05D000589 ORTHO05D013236 5.5e-14 80.5 65 64.6
BolC2t08087H Brassica oleracea HOM05D000589 ORTHO05D000401 7.2e-14 80.1 65 66.2
BcaC01g06245 Brassica carinata HOM05D000589 ORTHO05D013236 9.4e-14 79.7 66 63.6
BcaC02g10574 Brassica carinata HOM05D000589 ORTHO05D000401 2.7e-13 78.2 66 63.6
BcaC05g28225 Brassica carinata HOM05D000589 ORTHO05D013236 2.7e-13 78.2 66 66.7
BcaC05g28565 Brassica carinata HOM05D000589 ORTHO05D013236 2.7e-13 78.2 66 66.7
BolC7t44298H Brassica oleracea HOM05D000589 ORTHO05D000401 2.7e-13 78.2 66 66.7
BcaC05g26980 Brassica carinata HOM05D012627 ORTHO05D032068 8.0e-13 76.6 61 67.2
BolC7t42664H Brassica oleracea HOM05D000589 ORTHO05D000401 5.2e-12 73.9 65 60.0
BolC9t58427H Brassica oleracea HOM05D000589 ORTHO05D000401 8.8e-12 73.2 66 62.1
BolC4t27643H Brassica oleracea HOM05D000214 ORTHO05D000131 1.2e-11 72.8 65 58.5
BraA01t02152Z Brassica rapa HOM05D000589 ORTHO05D013236 1.5e-11 72.4 64 59.4
BraA09t40699Z Brassica rapa HOM05D000589 ORTHO05D000401 3.4e-11 71.2 66 56.1
BcaC02g12409 Brassica carinata HOM05D015408 ORTHO05D013236 4.4e-11 70.9 51 70.6
BolC5t29855H Brassica oleracea HOM05D000589 ORTHO05D000401 9.8e-11 69.7 58 62.1
BcaC03g17138 Brassica carinata HOM05D015408 ORTHO05D013236 4.8e-10 67.4 51 68.6
BolC6t37576H Brassica oleracea HOM05D001308 ORTHO05D000401 4.8e-10 67.4 66 56.1
BolC4t26616H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-09 65.9 66 47.0
BraA09t39931Z Brassica rapa HOM05D015408 ORTHO05D013236 1.2e-08 62.8 50 62.0
BolC6t36521H Brassica oleracea HOM05D001308 ORTHO05D000401 1.6e-08 62.4 65 56.9
BolC4t23944H Brassica oleracea HOM05D001308 ORTHO05D000401 2.7e-08 61.6 65 55.4
BcaB03g11804 Brassica carinata HOM05D015408 ORTHO05D013236 4.5e-08 60.8 61 57.4
BolC2t06323H Brassica oleracea HOM05D000589 ORTHO05D000401 5.9e-08 60.5 73 56.2
BolC6t35753H Brassica oleracea HOM05D000589 ORTHO05D013236 1.7e-07 58.9 61 45.9
BolC7t43012H Brassica oleracea HOM05D001308 ORTHO05D001170 1.7e-07 58.9 66 57.6
BcaB05g23347 Brassica carinata HOM05D015408 ORTHO05D013236 2.3e-07 58.5 51 60.8
BcaC09g47789 Brassica carinata HOM05D015408 ORTHO05D013236 2.9e-07 58.2 54 61.1
BcaB06g28115 Brassica carinata HOM05D015408 ORTHO05D013236 1.1e-06 56.2 54 55.6
BolC1t04683H Brassica oleracea HOM05D009120 ORTHO05D024093 1.9e-06 55.5 77 50.6
BolC4t26739H Brassica oleracea HOM05D000589 ORTHO05D000401 1.9e-06 55.5 66 59.1
BcaC05g27498 Brassica carinata HOM05D000589 ORTHO05D014060 2.5e-06 55.1 75 50.7
BolC5t32197H Brassica oleracea HOM05D000589 ORTHO05D000401 2.5e-06 55.1 75 50.7
BcaC01g04973 Brassica carinata HOM05D000589 ORTHO05D000401 3.3e-06 54.7 73 49.3
BolC2t11251H Brassica oleracea HOM05D000589 ORTHO05D000401 3.3e-06 54.7 73 49.3
BolC6t36890H Brassica oleracea HOM05D000589 ORTHO05D000401 3.3e-06 54.7 76 46.1
BolC7t43503H Brassica oleracea HOM05D000589 ORTHO05D000401 3.3e-06 54.7 66 54.5
BcaC03g17917 Brassica carinata HOM05D000589 ORTHO05D000401 4.2e-06 54.3 75 52.0
BolC2t09776H Brassica oleracea HOM05D000589 ORTHO05D000401 5.5e-06 53.9 66 53.0
BcaC08g43109 Brassica carinata HOM05D000589 ORTHO05D000401 7.2e-06 53.5 77 48.1
BolC6t37440H Brassica oleracea HOM05D000589 ORTHO05D000401 9.5e-06 53.1 66 56.1


User provided reference genes

Program Settings