Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33320H Brassica oleracea HOM05D000589 ORTHO05D001885 2.2e-28 128.3 64 100.0
BcaC05g28515 Brassica carinata HOM05D000589 ORTHO05D001885 4.0e-22 107.5 56 98.2
BcaB04g18594 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-17 90.1 56 82.1
BcaC01g06283 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-16 87.0 56 78.6
BolC4t22259H Brassica oleracea HOM05D000589 ORTHO05D001885 5.6e-16 87.0 63 71.4
BcaC05g26629 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-15 85.9 56 76.8
BcaC08g45778 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-15 85.9 56 76.8
BolC6t38683H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-15 85.9 56 76.8
BolC3t14145H Brassica oleracea HOM05D000589 ORTHO05D001885 1.6e-15 85.5 56 76.8
BcaC07g42449 Brassica carinata HOM05D000589 ORTHO05D001885 4.7e-15 84.0 56 76.8
BcaC03g14696 Brassica carinata HOM05D000589 ORTHO05D001885 6.2e-15 83.6 56 73.2
BcaC04g20618 Brassica carinata HOM05D000506 ORTHO05D000369 6.2e-15 83.6 56 75.0
BolC2t08273H Brassica oleracea HOM05D000589 ORTHO05D000401 6.2e-15 83.6 56 73.2
BcaC09g51394 Brassica carinata HOM05D000589 ORTHO05D001885 8.0e-15 83.2 56 75.0
BcaB04g18499 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-14 82.4 56 75.0
BolC6t37831H Brassica oleracea HOM05D000589 ORTHO05D001885 1.8e-14 82.0 56 75.0
BolC8t49249H Brassica oleracea HOM05D000589 ORTHO05D001885 1.8e-14 82.0 63 71.4
BcaB05g21820 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-14 81.3 56 76.8
BolC7t41896H Brassica oleracea HOM05D000589 ORTHO05D001885 3.1e-14 81.3 55 72.7
BcaC01g04079 Brassica carinata HOM05D000589 ORTHO05D001885 4.0e-14 80.9 56 73.2
BcaC02g12561 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-14 80.5 56 71.4
BcaC06g33596 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-14 80.5 56 71.4
C07p49130 Brassica napus HOM05D000589 ORTHO05D001885 5.2e-14 80.5 56 71.4
BcaC06g35518 Brassica carinata HOM05D000589 ORTHO05D001885 8.9e-14 79.7 55 70.9
BolC7t43381H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-13 79.3 55 72.7
BcaC04g20325 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-13 78.6 58 72.4
BolC9t57367H Brassica oleracea HOM05D000589 ORTHO05D001885 2.0e-13 78.6 58 72.4
BcaB06g25902 Brassica carinata HOM05D000589 ORTHO05D001885 5.8e-13 77.0 57 70.2
BcaB05g21779 Brassica carinata HOM05D000589 ORTHO05D001885 9.8e-13 76.3 57 73.7
BcaC08g44836 Brassica carinata HOM05D000042 ORTHO05D000028 1.7e-12 75.5 64 65.6
BcaB05g21670 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-12 74.7 57 71.9
BcaNung03387 Brassica carinata HOM05D000169 ORTHO05D001885 2.9e-12 74.7 57 71.9
BcaB03g16415 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-12 73.6 57 71.9
BolC8t49853H Brassica oleracea HOM05D000589 ORTHO05D001885 6.4e-12 73.6 57 70.2
BcaB01g03595 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-11 72.8 56 66.1
BcaC09g48220 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-11 72.8 64 64.1
BolC5t29856H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-11 72.8 57 70.2
BcaC04g19449 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-11 72.4 57 70.2
BcaC02g10306 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-11 72.0 57 64.9
BcaC01g00211 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-11 71.6 57 70.2
BcaC02g11269 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-11 71.6 58 65.5
BcaC08g47072 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-11 71.6 56 64.3
BcaC02g10987 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-11 71.2 56 67.9
BcaC03g17674 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-11 71.2 59 69.5
BcaC05g28077 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-11 71.2 57 70.2
BolC5t32842H Brassica oleracea HOM05D000589 ORTHO05D001885 3.2e-11 71.2 57 70.2
BcaB01g01212 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-11 70.9 57 63.2
BcaB02g10165 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-11 70.9 49 75.5
BcaB05g25134 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-11 70.9 57 63.2
BcaC02g11017 Brassica carinata HOM05D000589 ORTHO05D001885 5.4e-11 70.5 57 68.4
A09p69380 Brassica napus HOM05D000696 ORTHO05D001068 5.4e-11 70.5 57 68.4
BolC4t23737H Brassica oleracea HOM05D000589 ORTHO05D001885 5.4e-11 70.5 57 68.4
BolC8t52930H Brassica oleracea HOM05D000696 ORTHO05D001068 5.4e-11 70.5 57 68.4
BraA09t39932Z Brassica rapa HOM05D000589 ORTHO05D001885 5.4e-11 70.5 57 68.4
BcaC07g38698 Brassica carinata HOM05D000589 ORTHO05D001885 7.0e-11 70.1 56 67.9
BcaB04g20840 Brassica carinata HOM05D000589 ORTHO05D001885 9.2e-11 69.7 54 70.4
BcaC02g07277 Brassica carinata HOM05D000589 ORTHO05D001885 9.2e-11 69.7 57 68.4
BolC4t28438H Brassica oleracea HOM05D000589 ORTHO05D001885 9.2e-11 69.7 57 68.4
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 9.2e-11 69.7 56 67.9
BcaB01g02789 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-10 68.6 49 75.5
BcaB07g32763 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-10 68.6 57 68.4
BcaB03g15429 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-10 68.2 57 64.9
BcaC04g23550 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-10 68.2 57 63.2
BcaC04g23115 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-10 67.8 57 68.4
BcaC05g25220 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-10 67.8 56 66.1
BcaB01g03374 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-10 67.4 57 66.7
BcaC02g10332 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-10 67.4 59 66.1
BcaC02g10575 Brassica carinata HOM05D000589 ORTHO05D001885 4.6e-10 67.4 59 61.0
BolC3t19562H Brassica oleracea HOM05D000589 ORTHO05D001885 4.6e-10 67.4 56 64.3
BcaC02g08266 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-10 67.0 56 66.1
BcaC09g50986 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-10 67.0 49 71.4
BolC2t07866H Brassica oleracea HOM05D000589 ORTHO05D039931 6.0e-10 67.0 49 71.4
BolC3t21112H Brassica oleracea HOM05D000589 ORTHO05D001885 6.0e-10 67.0 56 66.1
BcaC01g05715 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-10 66.6 58 67.2
BolC3t14691H Brassica oleracea HOM05D000589 ORTHO05D000401 7.8e-10 66.6 58 67.2
BcaNung02804 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-09 66.2 57 66.7
BraA03t15656Z Brassica rapa HOM05D000589 ORTHO05D001885 1.0e-09 66.2 53 67.9
BcaB05g24814 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-09 65.9 56 58.9
BcaC01g03361 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-09 65.9 56 64.3
BcaNung03683 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-09 65.9 57 64.9
BolC7t44689H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-09 65.9 57 64.9
BcaC01g00022 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-09 65.5 55 65.5
BcaC04g21855 Brassica carinata HOM05D000589 ORTHO05D001885 2.3e-09 65.1 54 64.8
BcaB01g05038 Brassica carinata HOM05D000007 ORTHO05D000017 3.0e-09 64.7 65 58.5
BcaC03g18390 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-09 64.7 54 64.8
BraA09t40543Z Brassica rapa HOM05D000589 ORTHO05D001885 3.0e-09 64.7 54 66.7
BcaC02g07926 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-09 63.9 57 64.9
BcaC03g15438 Brassica carinata HOM05D000589 ORTHO05D001885 5.0e-09 63.9 49 69.4
BolC2t12526H Brassica oleracea HOM05D000589 ORTHO05D001885 5.0e-09 63.9 54 64.8
BolC5t33024H Brassica oleracea HOM05D000589 ORTHO05D001885 5.0e-09 63.9 56 60.7
BcaB01g00801 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-09 63.5 51 68.6
BcaC04g18615 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-09 63.5 54 63.0
BcaC05g24982 Brassica carinata HOM05D000589 ORTHO05D001885 8.6e-09 63.2 54 66.7
BcaNung04705 Brassica carinata HOM05D032946 ORTHO05D001885 8.6e-09 63.2 51 68.6
BcaC01g03580 Brassica carinata HOM05D000589 ORTHO05D039931 1.1e-08 62.8 48 70.8
BcaC05g27662 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-08 61.6 47 66.0
BolC9t59088H Brassica oleracea HOM05D000589 ORTHO05D001885 2.5e-08 61.6 54 61.1
BcaC09g51619 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-08 61.2 57 57.9
BolC9t53328H Brassica oleracea HOM05D000589 ORTHO05D001885 3.3e-08 61.2 57 64.9
BcaB02g11384 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-08 60.8 54 61.1
BcaB03g14716 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-08 60.8 54 61.1
BolC9t53951H Brassica oleracea HOM05D000589 ORTHO05D001885 5.6e-08 60.5 54 61.1
BraA06t25708Z Brassica rapa HOM05D000589 ORTHO05D001885 1.2e-07 59.3 53 64.2
BcaB06g28252 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-07 58.5 53 62.3
BcaC05g29515 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-07 58.5 56 62.5
C02p15560 Brassica napus HOM05D000171 ORTHO05D000101 8.1e-07 56.6 55 58.2
BcaC08g45632 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-06 55.5 56 60.7
BcaC08g45440 Brassica carinata HOM05D000589 ORTHO05D001885 4.0e-06 54.3 57 59.6


User provided reference genes

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