Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 1.8e-73 279.3 149 100.0
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 1.8e-73 279.3 149 100.0
BcaC01g05229 Brassica carinata HOM05D000496 ORTHO05D039269 1.0e-65 253.4 149 90.6
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-65 252.3 149 90.6
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 6.2e-26 121.3 153 52.3
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-24 114.4 157 49.0
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-22 108.2 151 47.0
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 1.2e-21 107.1 145 46.2
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-21 106.3 144 46.5
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 4.6e-21 105.1 154 46.1
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-20 103.6 146 45.9
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-20 102.4 149 45.6
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-20 101.3 135 49.6
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 2.1e-18 96.3 138 50.7
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 4.8e-18 95.1 138 50.0
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 8.1e-18 94.4 150 46.7
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-17 92.4 150 46.0
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 4.0e-17 92.0 152 44.1
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-17 91.7 143 45.5
BcaC06g33823 Brassica carinata HOM05D000496 ORTHO05D031880 6.9e-17 91.3 150 46.0
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-16 89.0 151 43.0
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-16 88.6 131 51.1
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-16 87.8 144 43.8
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-16 87.8 144 43.8
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 1.7e-15 86.7 137 46.0
BcaC03g17067 Brassica carinata HOM05D000496 ORTHO05D095706 2.2e-15 86.3 149 43.0
BcaC06g36694 Brassica carinata HOM05D000496 ORTHO05D094614 2.9e-15 85.9 100 50.0
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-15 84.7 148 43.2
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-15 84.7 157 44.6
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 6.4e-15 84.7 144 41.7
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-14 84.0 149 44.3
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 1.4e-14 83.6 155 41.3
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-14 83.2 154 41.6
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 2.4e-14 82.8 140 43.6
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 2.4e-14 82.8 144 40.3
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 4.2e-14 82.0 153 41.2
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-14 81.6 138 44.2
BcaNung02556 Brassica carinata HOM05D000496 ORTHO05D095281 7.1e-14 81.3 100 50.0
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 9.3e-14 80.9 148 38.5
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-13 80.5 144 43.8
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-13 78.6 153 40.5
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 3.0e-12 75.9 142 42.3
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 5.1e-12 75.1 148 39.9
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 8.7e-12 74.3 149 38.9
BcaC08g43453 Brassica carinata HOM05D000496 ORTHO05D031880 1.1e-11 73.9 114 46.5
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-11 73.6 143 41.3
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 1.9e-11 73.2 134 42.5
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-11 72.8 146 39.7
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-11 72.0 157 37.6
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 5.6e-11 71.6 144 38.9
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 5.6e-11 71.6 118 44.1
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 5.6e-11 71.6 144 38.9
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 1.3e-10 70.5 149 35.6
BolC9t55084H Brassica oleracea HOM05D020706 ORTHO05D032392 2.1e-10 69.7 149 38.3
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 2.1e-10 69.7 154 38.3
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-10 68.9 148 39.2
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 8.1e-10 67.8 148 35.8
C04p23060 Brassica napus HOM05D000496 ORTHO05D019920 8.1e-10 67.8 88 52.3
BcaB08g37273 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-09 67.4 105 44.8
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 1.1e-09 67.4 140 39.3
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 2.4e-09 66.2 120 42.5
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 3.1e-09 65.9 153 38.6
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 3.1e-09 65.9 153 38.6
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-09 65.5 151 39.1
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 5.3e-09 65.1 136 36.8
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 1.2e-08 63.9 134 38.8
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 2.0e-08 63.2 146 34.2
BcaB06g27458 Brassica carinata HOM05D000496 ORTHO05D039111 2.6e-08 62.8 124 37.9
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-08 62.8 134 38.8
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 3.4e-08 62.4 124 37.9
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-07 60.5 151 37.1
BcaC09g50172 Brassica carinata HOM05D025630 ORTHO05D032542 3.8e-07 58.9 142 34.5
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-07 58.5 151 35.8
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 6.4e-07 58.2 108 43.5
C08p18460 Brassica napus HOM05D000496 ORTHO05D042898 1.1e-06 57.4 102 37.3
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 1.4e-06 57.0 151 35.1
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 1.9e-06 56.6 127 38.6
BcaB06g26444 Brassica carinata HOM05D000496 ORTHO05D091650 2.4e-06 56.2 132 31.8
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-06 56.2 119 32.8
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-06 55.5 70 51.4


User provided reference genes

Program Settings